Array 1 58-547 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUPA01000158.1 Clostridium sp. BL8 Contig233, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 58 30 100.0 37 .............................. AAAACCATTGTCATTGTACTGGATTTCACCTTGCTTC 125 30 100.0 36 .............................. AAATAGATGGTATTATTGCTATGTTAATGGCATTGC 191 30 100.0 35 .............................. CTTGATGACTTTCTCTTTGAAATTGCCAACAAACA 256 30 100.0 35 .............................. CATTACCAACTTATGCAATTAAAACATTATAGGAG 321 30 100.0 36 .............................. AACAATTCTCCACATTTCAGGCAAACTGTACCATTC 387 30 100.0 35 .............................. CCAACTAAAATAAATCTTCAGTTATTTGGAATTGA 452 30 100.0 36 .............................. ATGCAAGGCAAGAGTTTGATAAATATATTCAGCATA 518 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 100.0 36 ATTTAAATACATCTCATGTTAAGGTTCAAG # Left flank : CATCTCATGTTAAGGTTCAAGTGCTATAATCACCAAGTAGTGCCATACCTCTTTCAGA # Right flank : GTATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAAGGTTCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 567-13 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUPA01000136.1 Clostridium sp. BL8 Contig214, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 566 30 100.0 37 .............................. TGGCTTCAATAGGGTAACTATCCATGGCTCCAGCTTC 499 30 100.0 35 .............................. GTAATATTTTTTATACCTCTCCAAGCAGTTTGTAT 434 30 100.0 34 .............................. TTCCTTTTAGGTTGCCCTGTGCATCATAAAACTT 370 30 100.0 36 .............................. AGCTCTTTTACTACATAGTTAAATATATTTTTTTGC 304 30 100.0 36 .............................. CGATTTCTTGAATCTCTTGGAGCTATAGGCATACCG 238 30 100.0 36 .............................. GAAGCTACATCGGCCGCATCGTCGTGGGTACAAAAC 172 30 100.0 35 .............................. TTAATCTACTTTTATTATCCTGGACTACTTAACCC 107 30 100.0 35 .............................. TGGATAAAAAATAAAACCTTTCCTGACGCATTATC 42 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 9 30 100.0 36 CTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : ATTTATAATATAATTTTACCAACCTGATTATAACCTTAGGTCAGCCAAAGGCTTGAAATTACTGATCTAAGGTTTATTTTCAGTTACTTTAAAGTTTAAGATGTTTCACTTGGTAAATTATTTATAAATCGTTGAAATAAAAGGCCTTTAGGGATAAACTTAAATTAAAGAATGGCATTTTATCAGT # Right flank : TTKTGATGAATAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [15.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 7-1346 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUPA01000239.1 Clostridium sp. BL8 Contig90, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 7 30 100.0 34 .............................. TCAGAAGTAGCGCCACTTACAGCTTTAATGTTAG 71 30 100.0 36 .............................. CCATTAACATACCATTCTGTACTACTCGCATAAGCA 137 30 100.0 34 .............................. TTTACTGGCTCACCTCCCCTCATATCGCTAACTT 201 30 100.0 36 .............................. TCATCTGCTAGTGCTGGGCTTGATTTAATTATTTTC 267 30 100.0 36 .............................. ATAAAAAAAGAAGGTAGTTCCAATTGTCATCACGAC 333 30 100.0 36 .............................. ACTAATGAAAATAATAAAACTAGGAGGTTTAAAAAT 399 30 100.0 37 .............................. CAATAGACAAGCTTAATAGAGAAACTGGGGACAGATA 466 30 100.0 36 .............................. TCAATATAGGCTTCAGCATCTTTGCCATCTGCTATA 532 30 100.0 37 .............................. TTTTTTTACCGCTGTACCGAATGGTAATAATCCTCTT 599 30 100.0 37 .............................. ATGTTGTTGCCCCACTATATGCTCTCCAGCTGATAAG 666 30 100.0 36 .............................. TTAAGCCTAACGAACTCTTTATGTGCTATTGGGTTA 732 30 100.0 35 .............................. AAAGAGAAGGTTGAGCAAAATGCAAAATTTGAAGA 797 30 100.0 38 .............................. TATTCCTTCCAATCTTTAAAACTTAAAAAATACAGCTC 865 30 100.0 37 .............................. CAAATATACTTCATTCTTGGGATAATGTTGATATGTA 932 30 100.0 36 .............................. TTTATAGGCTTTTTAAGGCTATGTAATTCTTGAAGG 998 30 100.0 36 .............................. AAGAAAAAGGTGTAAGAAACATTGAGCAATTTAAAA 1064 30 100.0 36 .............................. AGATATAGACAAGCCTTTCAGTAATGGATTAATGTA 1130 30 86.7 31 .G...............T......CC.... AAACTGGTTTAATTTATTAAAGTATTGTAAA 1191 30 76.7 37 ......TA.......A.A...CG..A.... AGTAAAGTATACTTCACTGGTTGTATAACCTCTTCAA 1258 30 90.0 29 .....GTT...................... GGAAGAATGGGCGTAAAAATGTCCGTAAG 1317 30 90.0 0 A..........................G.C | ========== ====== ====== ====== ============================== ====================================== ================== 21 30 97.3 36 CTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : AGCTTAC # Right flank : CGGAGATTTTTATAGTTGTTTATCTAATAAAAAATCCATTCCTCCATAAAACTCTTTTACTATTTCTTCATTACACAATCCACTTTTAGGATTACCTTTATCTAGTTAATTCTAAAAACTTCACCAGTTTTTAATTCATGTAAAAATTTTTGAAAACCTGGCACTTCAACTGCTTTTTATCATATCCACTGCAATTTGAGGACTTGCGCCTTTACCTGCCAAATCACCTAAGCACATAATTCTACTAATTACCCTATTTTTTATATCTAATAACACTGCTTCCAATGCAGGTATATTAGCATGTATGTCTGAAATTAATGCAATTCTCTCCAATTAAACATAACCATCATATCGTTCTTAATTGCGTGCTAAATTATAAAATTTTCAATTCAATGGTAATTATATCATATACTTCATATTAGTACATTAAACCACTATAGATTTACCCCTCAGATTTGGCTTATAGCACCGCATTATTCACTCTTCAAAAAATAGTACTC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [6.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //