Array 1 403033-401661 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABITV010000003.1 Serratia ficaria isolate CIP111011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 403032 29 100.0 32 ............................. CACATAATCAGCGTCTACCCCAACGCGGTTAA 402971 29 100.0 32 ............................. TGACAATATTCTCTCGAATCCTCTATTTATTG 402910 29 100.0 32 ............................. CAACATCGTTGTTGAATTGGTGGCTTAATGGA 402849 29 100.0 32 ............................. GCCATTGCAGCAAAACCGTCATTTTGCATTGT 402788 29 96.6 32 ............................A GATTTGGATGGATAATGAAATTCAGCCGGTTC 402727 29 100.0 32 ............................. GGGTGATGTGCAACGCCGACTTCTTCGACGAA 402666 29 100.0 32 ............................. TGAACATGGTTTTCTTCTCCTGGGTCTTCTGG 402605 29 100.0 33 ............................. TACCCTTTGCATTTGGCTTCCGACATTAAAAGC 402543 29 96.6 32 ............................C ATCCATCGGCGATTACTGATGCGGAAGGAGTT 402482 29 100.0 32 ............................. GTAATCATCAGCATTCGCGTTGGATTGCCCCT 402421 29 100.0 32 ............................. TTGTATGACATATAACCTTCCATTTTCGAGGA 402360 29 100.0 32 ............................. AATCATGGAACTGCTGCACAAATGCGGCGGTA 402299 29 100.0 32 ............................. GAAAAAATTCGGCTGACGGCCGACGAACTGGC 402238 29 100.0 32 ............................. GCTTTTTCTTCGGCGTACGGGCGACGATGTCG 402177 29 100.0 32 ............................. TCAATGTGAATGCGCCAGGTGTGACCCTGAGA 402116 29 100.0 32 ............................. TTCACCGGAATGGCTCCACCTCAACTGGTTGT 402055 29 100.0 32 ............................. ATGTAATTTTCCGTATCCGTGGTGCGGTTACC 401994 29 100.0 32 ............................. CTGACATTCGAGGTGAAGCATGGACAATAAGC 401933 29 96.6 32 ..........................T.. AGTACGCGCTCAATGCGTCTGGCATCGTTAAC 401872 29 96.6 32 .............T............... GGCTTCCAAATGAACAAATCAACTATCTTCTC 401811 29 96.6 32 .............T............... GGGCCGTGATGCAAATATTACGCGATTTGACA 401750 29 100.0 32 ............................. GACAAAGAAACCGCGCCAAAGCTGCCGTTTAA 401689 29 72.4 0 ............T........T.TTCTTT | ========== ====== ====== ====== ============================= ================================= ================== 23 29 98.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTCAGCCCGGTCGATGTGGCGGGTGAAGATCGCCAATGGGTCGGTCTGGCGCCGTTGGCGGTGGACGAAAGCCTGCGCCGCCAGGGCTTGGGCGAAAAGCTGATCTACGAAGGGCTGGATTCGCTCAATGAGTTCAGCTACGCCGCGGTGGTGGTGCTGGGCGATCCGGCTTATTACGGCCGCTTCGGTTTCAAACCGGCGGCGGCCTATGGCCTGCACTGCCGTTGGCCGGGCGCGGAAGCCGCGTTCCAGGTTTATCCGCTGGCGGAAGACGCCCTGAGTGGCGTCAGCGGTGAAGTCGCATACTCGGCGCCGTTTAACCGGTTTTGAGTGTTAATTAGCTGATAATTAATTAGAAATCGGTGATTAGCGAAAACTTGTGAAACTTTGATTTAATTTAACTAAAAATCAATAGGTTACGATTTTGTAAAATGTGATGATATTCGGTAGGAATTTAGACTGAATAATTTTATTTATAATTCAATAACCTACTTTTAGA # Right flank : ATCAGTGCTAATATAAATTTTGCACAAATGGACGACAAAAAGGAGCTTTACTCATGTCGCTACATGGACAGTTTATCGTTAATGATGCAGATTTTTCCCCGTTGCTAATATATGGTGTTGGCACCTTTTTAGCCTACTCTGGCAATGGAAAGTATCGTAACAAAGCCGCTTGCGTTGGTGTCCCCGATAACGGCCCGATTCCTAATGGCCGCTACCATATCGTCAATAGGTCAACCGGTGGTTGGAAAGGCATGATCAGAACAGATCTTCATGATTTCTATTCGTGGTCCACGCCAACGCCGGTTATCAAATATGAGTGGTTTGCCCTTTATCGTGACGATGGAAAAATTGACGACTACACGTGGATTAATGGTGTAAAACGGGGTAATTTCCGCCTGCATCCATCGGGCCCATTAGGCATATCTTTGGGCTGTATCACGCTACAACATCGGACGGACTTTTTAGCGATTCGTCAGGCATTACTAACAACCCGGCCAGTG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //