Array 1 5112-6296 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJEPP010000006.1 Bifidobacterium sp. CLA-AA-H280 NODE_6_length_104223_cov_14.066992, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	====================================	======================================	==================
      5112	    36	 100.0	    37	....................................	GAAAGCTGATTATCGCGTGACGAAAACCGGCGAGCTT 	
      5185	    36	 100.0	    35	....................................	CACGTGCACTGCTGTGCCTTCGCGAAGCACGCCAA   	
      5256	    36	 100.0	    37	....................................	ACACGTACGGAATGCGAATCGTAGCGGGCAGCAGAAT 	
      5329	    36	 100.0	    36	....................................	CAAGAACTCTTTGACGTGACGCAGTGTAGTGGCGCT  	
      5401	    36	 100.0	    34	....................................	TGCCGAACCTCTTGCGGGGGCTTCCATGAACCGC    	
      5471	    36	 100.0	    38	....................................	CTTACCGGCCATGGCTTCCTGCTTCATTAAATCGAATG	
      5545	    36	 100.0	    37	....................................	ACTATGACAGTGGGCAGTGGCGGCAGAGTTGGATTGT 	
      5618	    36	 100.0	    38	....................................	TGACCAACTGTTTGTCGGCGGTTTTCGCGAGATTCGAG	
      5692	    36	 100.0	    36	....................................	GACCGGTTTGGCCGTGACAAGGGCGATTACGCGATC  	
      5764	    36	 100.0	    35	....................................	TAGTTGTCGGATAGATGAATGGGGCATCCTTTCCG   	
      5835	    36	 100.0	    36	....................................	GAACGCAACTACTACCTGCTTCATCCTGAGAAGAGA  	
      5907	    36	 100.0	    34	....................................	ATCGGCAGCGATGGTTTCGCGCATGGTCTGGCCA    	
      5977	    36	 100.0	    34	....................................	AAGTCAAGCGTGTACACGCTAGTTGCCGTCTGCG    	
      6047	    36	 100.0	    35	....................................	AAACGTTTCCTGGGCTGGATGCCGAGCAGGGGCGA   	
      6118	    36	 100.0	    36	....................................	CGGAGGAATGAACCATTTCCTGAGTCATACGCTCAC  	
      6190	    36	 100.0	    35	....................................	CCCGGCGACATGCCAAGCGAAGTGCCGAACCAAAG   	
      6261	    36	  88.9	     0	.........T......A...G...T...........	|                                     	
==========	======	======	======	====================================	======================================	==================
        17	    36	  99.3	    36	ATTCCTGAGCATTCAAGCTCAGGACTTCATTGAGGA	                                      	       

# Left flank :   ATCTGGTGGCATATGATATCAGCGATGATTGCTGCCGCTCACATGTTGCGAAAATTCTTCAACACTATGGAGAGCGATTGCAATATAGCGTCTTCTTACTGCGGGTACGTCCTTCGATGATGTTGGATGTCCGTATGCAGATAGAGAGGGAAATAGATGACTCAATCGATTCTGTTGTGTTCTGTTCTCTTGGAACCATTTCTCAAACGGAAGAGGGCTTGGATTTCTTGGGGCGCCGTGGATACGTCGATTTAGAGATACCGACAGTGATTTGAAGTTTTAGCCTAATGGTGATGTTGTTTGATAAGTAAAGAGTGTTTTGCTGTTTTTCAAGTGCGAGAGATGCATCATTGCTGCGACACACGGTGAGCGCTCGCACTTGAAAAATAGTTGTTTTGGAGCCAGTGAACTTATATTGCTTCTGTATTGCGATAGAAATGAAAGAGTCGCTCGCAAAAGCCTTTAGAATATGTGTCATTGCAAGGTCTTAGACTATGACT
# Right flank :  AGCTATGGGCGAAGAAGCGCAACCGTCTCCAGTTTTTTAGATTAAAGCCAATATTCAGAGGTCTATCCAAAATCGCTGGATGATACTGTCTTCGTTCCGTCCCGTACCGTTCACGATTTCATTCTCCATCTTTCCACCATTGCTGATAATCGTCCGTCTTGATGCTTCATTGCTCTTGTGACAGGTAAGTAGAACACGTTGCTCGCCCTGCTCTTTGCAGATGGGCAGGAGTAAGGCGAGCATCGCTTTGGCATACCCTTTTTGACGTTCCGATGGCAAAATGCTATACCCAATATTTCCTCCGTATTGCAGCAGAAAAGGGGATAGCGGACGTCTGAAATCAATGATGCCGACGAGCTTGTCATCCGCCTTCCGAATAGCTAAAAATACTTCCGACGGCACATAGCCTTCGCCGTATTTCTTTTTCAATCGATTATCGAAATCGATCCATTCATCAAAAGAATCCGTGTCTTCGAGACCGGCGCATCCATCGAGACTGT

# Questionable array : NO	 Score: 3.22
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTCCTGAGCATTCAAGCTCAGGACTTCATTGAGGA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.40,-6.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-55.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0.37   Confidence: LOW] 

# Array family : NA
//