Array 1 59340-62491 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSTJ010000009.1 Acinetobacter baumannii strain A35 P_contig000009, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 59340 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 59400 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 59460 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 59520 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 59580 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 59640 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 59700 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 59760 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 59820 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 59880 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 59940 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 60000 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 60060 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 60120 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 60180 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 60240 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 60300 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 60360 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 60420 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 60480 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 60540 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 60600 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 60660 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 60720 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 60780 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 60840 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 60900 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 60960 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 61020 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 61080 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 61140 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 61200 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 61260 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 61320 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 61380 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 61440 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 61501 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 61561 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 61621 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 61681 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 61741 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 61801 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 61861 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 61921 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 61982 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 62042 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 62102 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 62162 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 62222 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 62282 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 62342 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 62402 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 62462 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //