Array 1 232091-229198 **** Predicted by CRISPRDetect 2.4 *** >NZ_BILC01000003.1 Klebsiella pneumoniae strain TUM14129 sequence03, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 232090 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 232029 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 231968 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 231907 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 231846 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 231785 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 231724 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 231663 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 231602 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 231541 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 231480 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 231419 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 231358 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 231297 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 231236 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 231175 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 231114 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 231053 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 230992 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 230931 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 230870 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 230809 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 230748 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 230687 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 230626 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 230565 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 230504 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 230443 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 230382 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 230321 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 230260 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 230199 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 230138 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 230077 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 230016 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 229955 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 229894 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 229833 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 229772 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 229711 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 229650 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 229589 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 229528 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 229467 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 229406 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 229345 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 229284 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 229226 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 48 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //