Array 1 215343-214654 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VTFM01000001.1 Pseudomonas aeruginosa strain CF16053 contig_1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
    215342	    28	 100.0	    32	............................	CTAGAGGCCTGCCCAGGCGGACTAACCCACCA 	
    215282	    28	 100.0	    32	............................	CGGAGTACTGACAGCCCACCGACTCCCTAGAG 	
    215222	    28	 100.0	    32	............................	TGCCGGTAGCAGGGCATCAACAGACCAAACAC 	
    215162	    28	 100.0	    32	............................	GTCGACGTCGATGAACGCCGCGCACGGATGGA 	
    215102	    28	 100.0	    32	............................	TTGCTAAGCATCCACTGTGCCGCTCCTGTAGC 	
    215042	    28	 100.0	    32	............................	AAGTTGACCAGCATGGCCGGCATCGACAGCGT 	
    214982	    28	 100.0	    32	............................	TGGGCCGGCGCCTACGCGGCGCATCAGCCGGT 	
    214922	    28	 100.0	    33	............................	ATGCAGCCAGGGCTTACTCCGCTGCTGCTGGAC	
    214861	    28	 100.0	    32	............................	TTGAGCTTGTCGTTGTACTCGTCGAGGCTCAT 	
    214801	    28	  96.4	    32	.............T..............	ATACTGACTCAGCCAGGGAAAAGTCACTTGGA 	
    214741	    28	  96.4	    32	.............T..............	ATTGGCCGTGCAAGGTCCACCAGTCGATGCTT 	
    214681	    28	  96.4	     0	.............T..............	|                                	
==========	======	======	======	============================	=================================	==================
        12	    28	  99.1	    32	GTTCACTGCCGTACAGGCAGCTAAGAAA	                                 	       

# Left flank :   CATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGTTGCATCGCCCATCACAAGACCTTTCGCGCTCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA
# Right flank :  CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAACAGCTTGAGCAGCAAACATGAAGCCCGCTCGAACGTCCCGTAGGGCGAATACCGCCACAGGCGGTATCCGCCGATGCCCTGGAGAGCCGGCGGATAACCGCAAGC

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTACAGGCAGCTAAGAAA
# Alternate repeat :   GTTCACTGCCGTATAGGCAGCTAAGAAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,9] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGTACAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.51   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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