Array 1 171167-170076 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PVTC01000006.1 Streptococcus anginosus strain OUP10 oup10.s1-trimmed-pair1.paired_contig_6, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    171166	    36	 100.0	    30	....................................	AAACCAACAGAACAAACACAAGAAAATCAA	
    171100	    36	 100.0	    30	....................................	CATTGCAGCTCTCCTTTTAGACCGCAAAGA	
    171034	    36	 100.0	    30	....................................	ATCACACGTTTGTATCAAGAATATCAAACG	
    170968	    36	 100.0	    30	....................................	TCTATATCAATACCATATAATTTAGCTTCT	
    170902	    36	 100.0	    29	....................................	CGAGAACCCTCGCCCCAACCAACCTTAGA 	
    170837	    36	 100.0	    30	....................................	TTACTTCTACAGCTATTTCAGCTGGATTGG	
    170771	    36	 100.0	    30	....................................	AAAATATCTTGACAAAACTTAAATAAAGTT	
    170705	    36	 100.0	    30	....................................	GATGTAAATGTAAAAGCATTGTAATCAAAA	
    170639	    36	 100.0	    30	....................................	ATTTGAACCATATTTACCGTTTCGGTAGTG	
    170573	    36	 100.0	    30	....................................	AATATGCCGTATGCAAATACAACAGCCATT	
    170507	    36	 100.0	    30	....................................	GTTTCAAATCAATCACAAGATGAATTTGAA	
    170441	    36	 100.0	    30	....................................	AATTGCGAAATAAGGTTATAAAACCACTAA	
    170375	    36	 100.0	    30	....................................	AGGCATTAGCTCCCCTACCTACTACAGGCT	
    170309	    36	 100.0	    30	....................................	CCTATGAAGAAAACACTGAAACCTAAACGA	
    170243	    36	 100.0	    30	....................................	AAGTTGGTCAATGGGTGACAATTAAGACGA	
    170177	    36	 100.0	    30	....................................	TTTTACATTTCTATAACAAATCGCGGTGAT	
    170111	    35	  77.8	     0	..................AA-..C.T.G.A.....T	|                             	C [170080]
==========	======	======	======	====================================	==============================	==================
        17	    36	  98.7	    30	GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC	                              	       

# Left flank :   ACGATTACTTGAATTATTGCTCATTTGTAAAATGTTGCGAGCAACTAGAGGAGATGGCCGACAATTACAGTAATTTTAGTGTCATTATTTTCCCGTCAAATGAAGGCTATCTTTATTTGAATCGCGAGAATATGGAATACGTCAATATTGTTTCTGATTTGGTTGAACATTTTTATGAATTTTCTTTTATGTATGAAAGGTTTATTGGTCAATATCCTACTAACGACGTACCTACAGAAGATGATTTCATCGTCTCTTTGCAAAAGATTTCACCATATTTATTTAGTAAAGACGTGACACATATGAGTTTATCTATCCAAGATATGGTAACCTTGAAAATTATGAACAGTTTATACCATTACAACAAGAAAATTCATTTTGCTTATAATCCACCTACTCAATTATTAATTAATTTTTTAAAAAATTAAGATTGACAAGCTCATCAAAGGACTTTATAATCAATGTAAGGGTACAAAAATCAAAAAATTTTTTAATTTGAG
# Right flank :  TACAGAACTCATTATTGGGCATTGTTTAATGTAAAAGAAATTTAATGAAATAGTTATCTGAGTAATACATTAGCGGAATTGTAATTTAGGTTGAAATGGTTTATAATGAAAAGTAACAAGTATATTAGGAGGTCGTCTAATGGAGAGAAAAATTAAAAAATCAGTAGTTGCGACCGGTTTAGCAGCAACCACTATTATTTCGGGCAGTTTATCACATCAAGTAAATGCTGAAGAAGTAAAAACACAATCTACTGAGCCAAAGACATCTGAAAAAATCACCAAACCAGTTACAGAAACAGATGTTCAATCAGCAAAGATACAAGCCGATGCTGCAAAGGTTCAAACAGATGCTCAGCAAAAAGTTGTAGAGCAAGTCAAAGGAGATGTAAATACTTCAAAGGACGCGGTGGCAGATAGCGAAAAAGCTGTTGCAAATGCTGAGGCAGAAAAGAAAGAAGCAACTCCAGAAGTTATTGAAACCGCAAAAGAAGAAGTGGCGA

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.20,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [9-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-76.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,4.91   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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