Array 1 2066883-2066049 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018335.1 Clostridium kluyveri strain JZZ chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2066882 30 100.0 36 .............................. TATCGTATAAATATAGACTGTATCCTATATCTCCAA 2066816 30 100.0 38 .............................. TCGGCACTGGTACTCGCACTTCAACGAACTTAAATTCT 2066748 30 100.0 38 .............................. CATTTATATTCTCCAAAATATGCTATTCTTACTGCTTC 2066680 30 100.0 37 .............................. TATGCATCTTTCTTTGTATTTGCATTTCTACCAGAAA 2066613 30 100.0 38 .............................. CAGGAACTCCTATGAATTGGCTCCCTGGACTGGAAAGG 2066545 30 100.0 36 .............................. CAGTATATCTTTTCTCATTAAACTCAACTTCTGTTT 2066479 30 100.0 37 .............................. AGTACATATAAGCTACTTTGTAGTTTTGCACCTCTAT 2066412 30 100.0 38 .............................. CTACAAACCTTCCTCAAATAATAGCAACTGGGATGCAG 2066344 30 100.0 36 .............................. GCAGATATTAAAGCGAAGAAAAAAGCTGAACAAGAT 2066278 30 100.0 37 .............................. TTTAATGGTGTAGTAGATATTATTAAAAAGGCTTATG 2066211 30 100.0 37 .............................. ATGGCTATCGCAGGTGTTTTATATCCTTCAACTTGCG 2066144 30 96.7 36 .........................A.... TCTTGGGCTTGCAGCAGCAGCTTTCGGACCAGTTAT 2066078 30 90.0 0 .........C...A...............T | ========== ====== ====== ====== ============================== ====================================== ================== 13 30 99.0 37 GATTTTAGATTACCTATGAGGAATTGAAAC # Left flank : TGTTTAAAGAAATTAATGAAGTGAAAATAAATGATAATAACGTTTTAACAGTGATTTCATATTTCCACTGCTGGTTTGAAAATATACATCCTTTTGCTGATGGAAATGGAAGAACGGGCAGGATGCTGGTCAATTATCTTCTTATAGGCAATAACTTTCCACCAATAGTTTTATTTGAAAATGACAGGGAACAGTACTACCTGGCTTTGGAATATTTCAATGAAACGCAGGAAATATCTAAAATGGTTGATTTTTTGGAAGATCAAGCTTATAAAACATGGATTAAAGATTATAATATCAAATTAAAAAATTTAAAGGATTTTTTGGATTAGATGATAAAGGTAACACCAATAATTTTTCCGTCGACCCCTAGTAGCGTAAAAAACCACGGGGTTCGATAAATTAAAAAGATGAATAATGATAAGGGTTTGTGATTCTTATTAACACTTCATTAACATGTTGATATTTTCATAAACCCTGTTATAATAATATGTGGATGG # Right flank : GACAAATAAACAAAAATGTGTATACAATATTACACAGATTTTAGATTACCATGGTATGCTTTATTTATTTTTTGGTATAATTATTTTAGTAGGATTTTATTCGAATGCTGGAATTAGCCAATGATACTATATTTTTGAAAGTAGGAAATAAGCAATGATATGCGTCTGGATAGGTTTTCCCCCTGAAGGATACGTATTCTAAGTACTAAATACACTAAGAATACTGTTAATAAGGTCCAGATGGAGAAGAGCAATTGTCTATAGCAAATTCCACCTAAACCTCTGAATTACTTGAGTCTAATTCTGAAAAATAATTTTATGATTAAGGAGATATATGTTATGATTTTTAAATCTAAAGCTGGTGGTAATAATTATGAATTAAATTACTTATTGTCTGAAACAGAAAGGATACTAGAACAAATACAGCATGGAAACTTAAAAGTTCGCGTCGATTATGGAAATTTCTCATCAGATATAAAAAAAGTTATTGAAAATATTAA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTTAGATTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 2075075-2073040 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018335.1 Clostridium kluyveri strain JZZ chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2075074 30 96.7 37 .........T.................... AAAAAAGAAATGATTGTTTTAAGTCTTCAAGGCTTGG 2075007 30 96.7 37 .........T.................... TAGGAAAATTACATATTACATCCTTTCCACGTTTTAA 2074940 30 96.7 37 .........T.................... CGATGCACCTTCTCCGTTTCTATCAAAGAACGTATTT 2074873 30 96.7 37 .........T.................... TCTCATTGATTAATGAAAAATCGTGTTAGGCGGATAC 2074806 30 100.0 36 .............................. CTTTTAAAAAAAATCATACTTTATTCCTCCTGACTA 2074740 30 100.0 37 .............................. TATTGCATACCTCTGCAAGTCCAATCTGGATTTAATA 2074673 30 100.0 37 .............................. TCATCAACCAGCATATATCTTTCTTTTCCTTTTCCTG 2074606 30 100.0 36 .............................. TTAGATATGGTGCAAAACAAGAAATGCTATCTTATA 2074540 30 100.0 36 .............................. TTATAATACATAAGGACAGTTATACAATAAAAGATT 2074474 30 100.0 38 .............................. AAAGGGAATGTGTTTTTCCTTCTTTAGAATCCACTAAG 2074406 30 100.0 38 .............................. AAAGAAGAATTGGAGGGAAATGATGTGAGTAAGAAAAA 2074338 30 100.0 37 .............................. TTTTTCTTAGGATACTGCTGCAATACAGCACTTTTCA 2074271 30 100.0 38 .............................. TAACATTCTTGTAACTTAGTAATAGCAATAATTTGTCC 2074203 30 100.0 38 .............................. CCTCCACTGTATCTCCGACATTAGCTCCTAGTTTTTCT 2074135 30 100.0 37 .............................. GTAGAACAAGTCTCAAATGTTTTTTCTACCATTTTCA 2074068 30 100.0 38 .............................. ACATCTTTGATATGCCAATCATATTCTTCATCTTGAAA 2074000 30 100.0 37 .............................. AAAAGAAAATGGAGGGAAATGAATAATGACAATGAAA 2073933 30 100.0 35 .............................. GAAAATATCATGCGGGAGCAATAGCAGTTACACAG 2073868 30 100.0 35 .............................. CTCCTCAAGAACAACAGGCTATCATGGATGTGACA 2073803 30 100.0 37 .............................. AAGCTATAACTTTGGATAATACAGGAAATGCAAGCAA 2073736 30 96.7 35 ...................T.......... AGATTAAGCAAAAAGAGCGTTTTGAAAAAATATTG 2073671 30 100.0 39 .............................. AGGGCTTTAGCCAAAGAAAAAGGAATTGTATAACTACCA 2073602 30 100.0 36 .............................. TATAAATCCCAAGGCAAAGAAAAAGGGAACCTAGTA 2073536 30 96.7 37 .........T.................... TCTAATTCAGTTTTTAAATTCAAAGGAGTAACTGCCT 2073469 30 96.7 38 .........T.................... TAAGTTAAATCTATGCTCTTTATGTTAGCTTTTCTCAT 2073401 30 96.7 36 .........T.................... TAAATTTACTGAGAGCAAACAGGTTGAAAATAGTTA 2073335 30 96.7 36 .........T.................... TTTGATCTGTTGTTAACGTAACTGCATTTAGAGCAG 2073269 30 96.7 35 .........T.................... ATTGTTTCATTATACTCTTTTATTGTTTCATTTAA 2073204 30 96.7 38 .........T.................... TAGTTACTTGTTGGACTCCACCATCACCTAAAATTTCA 2073136 30 96.7 36 .........T.................... CAGACTATAACAAAACACATAGAAAATATTCTAAAG 2073070 30 93.3 0 .........T..................T. | T [2073045] ========== ====== ====== ====== ============================== ======================================= ================== 31 30 98.5 37 GATTTTAGACTACCTATGAGGAATTGAAAC # Left flank : AAGTTATTGGTGCAGTTGCTGCTATAATATGGCCTTTGGCGGTGTGTATTTTTTTAGTTAGTGGGCTTGTTTTTGATAAATGGTATATTAATTGGATTGTATTTCCTATAACTGGTATTTTATTTGGGATGTTCAGTTCAGTTTACAGTATTATCAAAAAACGAAAAAATTAACAGTTCATTTCCTTTTATGGTGATACAATTAAGATGTAAACTGTCGCATCAATATAGGTGACTGTATTTGCGAAGAAAAAGATGAATATAGTTGCGATGGCTAATAATAAATATTCGTGGATAAATAAAGTGCAGTTATAGTATAGATTTTAATTTGAGAGATTCTGAGAGGACTGAATAGATTTTTCGTCCACCTCCAATAGTGTAAAAAAACCGGGGGTTCGACAAATTAAAAAAATAAGATTTAATAAGGGTTTATGACTTTTGTTAACATTTCATTAACATATTGATATTTTCATAAACCCTGTTATAATAATATGTGGATGG # Right flank : AATAATAAAAATTTTATAATTTTACTAATGTGTTTAAACAACCCCTGGGTTGTTTTTTATAGTTATCATTTTTTGATGATTATGAGAAAGATTATTATGATATAATTATGTAAATAAAGTATTCTAGTTCATAAAAATATAATTTGTGGAAGGGAGAATTACAGTTGGATATAAATGGCGTGTTTTTATGGTATTATAATATTTGCAAAAGAGAATTATGGCTTATGTCCAGAAAAATTGTACCGGATCAGCAGGATGAAAATGTAGATATAGGAAGATTTATACACCAAAATACTTATAAAAGAAACAAAAAGGAAATAAGTTTTGGCAATATAAAATTTGATGTAATATTTCGCTCCAAGGATAACATGGTAATAGGGGAAACCAAAAAATCATCTAAATATAAAGAAGCATCTAAATGGCAGCTGATGTTTTATCTAAAGACCTTAAAAGATGCAGGGATACATGCCAGTGGTCAGCTTCTCTATCCTGAAGAGAGA # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.95, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTTAGACTACCTATGAGGAATTGAAAC # Alternate repeat : GATTTTAGATTACCTATGAGGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 3 2660434-2659817 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018335.1 Clostridium kluyveri strain JZZ chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2660433 30 100.0 37 .............................. TTGTTTAGTGTGATTGTTGCTGTTATGGATTCATTAG 2660366 30 100.0 35 .............................. ACTTGTAATATATTTACTTTGAGGCTTGAACTGCT 2660301 30 100.0 34 .............................. GATATAACTCTGGTTCATCCTGTAGATATGGAAA 2660237 30 100.0 34 .............................. TTCTACAAAAGTCTCTGGATTTTTTGATAAAACT 2660173 30 100.0 35 .............................. TGGAAGAGGTGCTGGATGTTATCCAGGTGGGTATA 2660108 30 100.0 35 .............................. GGTATTCCTATTTTTATATATCCTTCCGTTTTCAA 2660043 30 100.0 36 .............................. GTATCAAGTATTTTACAATGACGGTTTGCTCCACGT 2659977 30 100.0 34 .............................. TGGCTATAGTTCTCGACATTCTCTTCCTCCTTTC 2659913 30 100.0 37 .............................. GCGGCTAAATGTGCAATAGTGCCAACAACCCAATCTG 2659846 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 10 30 100.0 35 GTTGAACCTTAACAAGGATTGTATTTAAAT # Left flank : ATATTTTTAATGGGATATAATTATCCTTTTATAGCAATTGATTATACCATAGTGTAATTTTACACTATGGTATAATATTAATCAAGTAAATTTTAATGCAATGTTTTAGAAAAAGTATTTGGTATAACTATTATAAAGAGCTATGATTCAGGCTATTAGAACTGTTGAATATTTAAAGAAGAACTTATTTAGGTGTGTAGATCTGCTTATTTTTTACTTTGAAGAATATATGGAAGTATTAGGCAGTATTAGGATAAAAAGAAGTGGGAGATTGTTTAGAATAAAGTGGCGATTAAATTTCAAGGGTACCGTTATGATAAAAATTTTTCCAACCGACTTCTAAAATAAAGGTATCTCTATCCATTTAAATGCAATGGCTTCAGCCAGTTTTTTATAATGATTTTGAAAAATAAAAAACGGTTGGAAAAATTTCGAACAAACTCTTTATTACCAATGCATTTAAGGTTATAATAAAAATAAAGAATGGCTAATTTACATTA # Right flank : GAACAAATAACATTTACATCTTTTGTAGCTCTTATAGTTCAACCTTAACAAGATTTGAAACAGATGTGAAAGTTTTTGACAAAGAAACATGATTTTGATGCGGCATGGAAAACAATATTGGAAGCTTTTGAAATAGAAATAGTAGAACTGCTTTTCCCGGAACTTTAGTAGATTTTTTAGAATATTTGTTTTTAATTGAAGATCCAGAGCTAGGAAATAAATATGAGAAATTTAAACATTAATCATTTTGTAGTATGATGGATGTATAAATAGAATAAAAGCAGTTAAATTCTCAGTTTAAAAAATAAAGCAAAGTGGAAAACAGAGTAGATAGTTTGCTCTGTTTTATTTTTATTGGTAGTAATGAAAAAAAGCACTATTTAGTATATAATTTAGATATATGTAAAAAAGTTCAATAGATATGTTAAAATACAGACTGAGGGGTTGGGAGCATGTCGAATTTTTCATTTCTGAATAGAAAATGGCCTGTATTGGCTAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACAAGGATTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 4 4116555-4116265 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018335.1 Clostridium kluyveri strain JZZ chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 4116554 31 100.0 33 ............................... AGGAAGAGGAACTACTAAAAAACAAATAGTAGA 4116490 31 100.0 34 ............................... ATGTATACAAACCAGAAATGATGGTTCTGAAATA 4116425 31 100.0 33 ............................... TGGAACGTCTAACAGTGGCACATACATTCGCAC 4116361 31 100.0 35 ............................... AAGAAAGGATAAGAGAAGTTGATCTACCATTAGAA 4116295 31 87.1 0 ................GA.......A....A | ========== ====== ====== ====== =============================== =================================== ================== 5 31 97.4 34 GTTGAACCTTAACAAGATTTGTATTTAAATG # Left flank : GATTATTGCGTAATCATACTATTTTTTGACTAGTATATACCTTAATAAGCTTGGATTCAAAGATATTTTAGGGCATATTTATGATATTAATTTCAGATCTATTATAAAAAAGTGATTGACGAATATAGTTATGACTCCGATTTTTGAAAAACTTAAATTGCTTATAAAAAATAATTCAGATAAATTTAAGAAGGATTTGGAAGTGTATCAATTAAAACATATTGAGATGATATTGAGGAACCAATATAAGTATTCTTATAGGCATTAACCATTATATCCAATTTACCACATTTTATATTTATTTTCAAAATCCCCGTTAGTATTTTTCCAACCTTAAACAAGCAAAAATTCTATATAAACTGTTGATATACAATGCTTCCAAGGCGATTTTATTCTTATAAATACAGAAAATAAAATCGCTTGGAAAAATTTTTATAAAATCCTTTATTTTCAATACTTAAAGAGATATAATGAAAATAAGAAATGGCTATTTTACATTA # Right flank : TTATACAAATATTTGATGCTGTTCCAATATATATGGGGATTATAGTCACACTCAAAATGGTTACTAACTTAAAAATCTTCCAGCTTGAAATTAAGAGGAGGGTTTAATAGTAAAAAAGAGCTTCACGTTTTCAAATTCTTTCCACATATCCAGAAACCAGTCTGATTTTTCTTTCCTAAGTTAGTTAATAATTTCATATAAATTTCAGGCTATCTATAATTTTCCTCCATCCCTTGAAATGCTATATCATATATCCTGCTAAATAATTCTTCATCAAAAATATGAAATTGACTCATAGAGTCACTCTTTTTTTCTAATGTGATATTTTTTAAAATGTAAACAACCCCTAATTATAAATCACATAAAGTTCACATCGTTATTACATATTGTAACTACAATTAATATTTATAATTTTTTAAAAGATGAGGTTATAGTAAGGTGTAGAGATATTCAAAAATAAAATAGTTTGTATTGTATATAAGTATAATTAAGAATTTAAA # Questionable array : NO Score: 5.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACAAGATTTGTATTTAAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.19%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //