Array 1 484362-485469 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLKV01000034.1 Pseudomonas aeruginosa strain WH-SGI-V-07060 WH-SGI-V-07060_contig4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 484362 28 100.0 32 ............................ CGGTAGAGACGTCGGTGAGCGCTGCGATCTGC 484422 28 100.0 32 ............................ GCAATCGATCAGGCTATGACCGCCGAAGCCTA 484482 28 100.0 32 ............................ TCGACGTTGCCGACCCGCGGCCGCGCCCGGTT 484542 28 100.0 32 ............................ TCGGCCAAGGCTCCGGCATCGAGCACGATGCC 484602 28 100.0 32 ............................ TTGAGGAACAGGCGCGCTACGTCCGCCGCGAA 484662 28 100.0 32 ............................ TTGATGATGCCGTCCTGCTGTTTGCCGGCGAT 484722 28 100.0 32 ............................ ATTCCGGCAGAGGTTCGCGAAGCGGACATTGA 484782 28 100.0 32 ............................ TGTACCAACTGAGGTGCTACCTCAACCATGGC 484842 28 100.0 32 ............................ AGGCCGATGGAGTAGCCGGACAGCACTGAGCC 484902 28 100.0 32 ............................ TAGTGTGGAATTGATGTGCGCATCTTCTTAAA 484962 28 100.0 32 ............................ TGTGCCGGGCAGGCTGGCCAGCGCCTCATTGA 485022 28 100.0 32 ............................ GTCGGCCTGGAGTTTCGTCGGGCGTACATTAG 485082 28 96.4 32 .................T.......... CAAGCGGACGGTGACACGGACTATCAGACCGG 485142 28 100.0 32 ............................ TCCGGCACGCTGTGCTGAGCCTGAGCTACAGG 485202 28 100.0 32 ............................ ATCTCAGCGCCGCCTGTTCTGCCGGCCGCATC 485262 28 100.0 32 ............................ TACGGGCAGTCACGGCGAAAGGCACTCAGCGA 485322 28 100.0 32 ............................ TCGCGCAATGATTTCAGCCGCGGAGCGCATAG 485382 28 100.0 32 ............................ ATAGATAACACGTGTGACCGCGACCACTACCG 485442 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 19 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GATACGTCCAACCCCGAGGTAACAGAATCGTCCCCCCGCTTCGTCCCGCTGCTACCCACCTCCCAGGCCGACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCTTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCTTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAATAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //