Array 1 16287-18962 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIRF010000001.1 Mycoplasma sp. CSL10166 NODE_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 16287 36 100.0 30 .................................... CCGATGTTATAATTAAATTTGAAATTTCAA 16353 36 100.0 30 .................................... TAGTGTTGTTAAAACGTATCAACTCTTTTT 16419 36 100.0 30 .................................... ACTTTAACTTCAACACTTTAAATTTATTTT 16485 36 100.0 30 .................................... ACTTTAACTTCAACACTTTAAATTTATTTT 16551 36 100.0 30 .................................... CTTTTACATAAAAAATGGGAGAGTGTCGAT 16617 36 100.0 30 .................................... AATCATTAATTTCTTCAATAAATTCAAGTA 16683 36 100.0 30 .................................... AACCGTCAACCTTTCAAACTACGCTCGAAC 16749 36 100.0 30 .................................... AACCATTCGAAAAAACACTAACAACATTCA 16815 36 100.0 30 .................................... AGTATCACCTTCACAAAGATGAAACAATGC 16881 36 100.0 30 .................................... TATAACAAAAAGAACAACAAATAAAATTGA 16947 36 100.0 30 .................................... CAAAAAACTGTCAAGGGTCGTATAAAAGTT 17013 36 100.0 30 .................................... GAACCAGAACAAAACGAAATTACAAAAGAT 17079 36 100.0 29 .................................... TTAGATCTGTTTTAAGTTTTTCAATTGTA 17144 36 100.0 30 .................................... ATCACAAAACATTCACACTAAATCGTTTTT 17210 36 100.0 30 .................................... GCTATATCAAGTTTAAAAGACTTATAAAGA 17276 36 100.0 30 .................................... TGAAGGCTATTTATTGGCCGACTTGGTAGA 17342 36 100.0 30 .................................... TAGACCCGCAAGTTATAAAAGATAAGTCAA 17408 36 100.0 30 .................................... GCGAGCGGTAAAAATTGAATAAGATTGCTT 17474 36 100.0 31 .................................... ATTGTAAATTTGTAAATCATCGTATCCTTTC 17541 36 100.0 30 .................................... ATACTATATATTCTATATCATTTAATTTAT 17607 36 100.0 30 .................................... GAACCAGAAGAAAACGAAATTACAAAAGAT 17673 36 100.0 30 .................................... ATACTATATATTCTATATCATTTAATTTAT 17739 36 100.0 30 .................................... TAATTTCTTTTTTAATTTCGGTTTTTAATT 17805 36 100.0 30 .................................... TCTATATATTCTTCTTCCAAAATATAAATA 17871 36 100.0 30 .................................... ATATGAAACAAGATTATTAGAATTGATTAA 17937 36 100.0 30 .................................... TATAATATTCATCGACACCCCTTTATTTTT 18003 36 100.0 31 .................................... ATTTTTATTTCTTTCTTTTCTTGTATTATTT 18070 36 100.0 30 .................................... TATGTTTGTATTAATATTTTCAATATTTTT 18136 36 100.0 30 .................................... TTTATTTTATAAAAACAACGAGGAGAAAAT 18202 36 100.0 30 .................................... ATTCAGATGAAATTTCATTTTGTTCAACTT 18268 36 100.0 30 .................................... AATCAAAACGATGAACACAATTACATAAAA 18334 36 100.0 30 .................................... TTGTTATATTTAACTGTAAGTTAGCCAAAA 18400 36 100.0 30 .................................... TTATCTGTTTTAAACAAAAAATTTTTTTCT 18466 36 100.0 30 .................................... GCTCAAGGGTTTATTAAAAATAATAATATT 18532 36 100.0 29 .................................... GCAACAACATTTTTTTGTATCTTAAATAA 18597 36 100.0 30 .................................... AAAGCATTGCTGCTTGTCTGCGCTGTGTTT 18663 36 100.0 30 .................................... TCCACATAAGCAATCAAGTATGATTCCGTA 18729 36 100.0 30 .................................... AAGTTTTAGAAACGGCAATTAATGCTTTGG 18795 36 100.0 30 .................................... TTATTTTTCGTTAAGAAATGGACCTATACA 18861 36 100.0 30 .................................... ATTTAGTTTGTGGGTGTCCAAAATTTTTTT 18927 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 41 36 100.0 30 GTGTTGTATTGCTTAAAAATAGTATAGCACTAAAGT # Left flank : AAGCAACTACTTATTTAGAAACAGAATATGCTAAATTAAATCAAAAATAGTAAAATAAATCATACTTATTAAAAAGTATATCCTAAAAGAAATACCAAGCGCGACACTTTCGTGCTTGGTATTTTTATTATGTCTTAATGATTTAAAAATCAATATTGTTACTTTTTTCAAAAAAATAAAAAATTTGCTTCTTTAGTTTTAAAGAAATCCACACTTCGATAAAAAGTTGTTTTAAAATTTTTGTTATATTTTTTATTGCTTAAACCTTAAACTAAACTTTCAAAAGTAAAGATTTTAAAAGAATTTTTTCATTTTAAAATTCCTTTGGCATATTGTCTGTTTTAGAAACATTTTCTTGTAAATAACCAAAATTTATAGAGTTAAGTCAAAACATTTTTTAAATTTTCTACGTATAAGTCTATTTTAATTTTCTATTGATCCATGTTAGAATGATGCATAAGTTTTGCAGTATATCTATAACAGTTTAGAGTCTTGAAATA # Right flank : TGTCAAATTTAATAAAAAACATAAAAATTGTCCTAATTAATGTTATTTAGCAACTCAATTATTAAAAGATTATCATTTTTTAGGATGCTAAAACTTTCGTCATAACTAAGTTGAAAATTATTAATTTTATTTTCAATTCAAGTATGTAAAGGTAAATACGAATCTATTAGCGTTAAATTTCTGTTGTTTTCTAACGAACATATTTCTAATTCTTGATAATCATCAACTAAATCAAATAAATCATTATTAATTATTAATATATTGAATTTATTTATATATTTTTCTAGTTTATTTATTTTAATAAAACTTAAATCCTTTAAAATAACAAAAGGTTTATTAGTAGAATCATAATTGTCCATTCATTTTGAAAGAGTTCTTTCATCAATAAAAATACTATCATTTAATGAAATTAACGATTTTAAAATTTTAATTTTATCGAAATTCAAATCTAATAAGTTTTCTCCTAATAGAGTGTTAATTAGATCTAAAGAATTTAAAAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTGTATTGCTTAAAAATAGTATAGCACTAAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.50,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [71.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //