Array 1 629-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUTP01000136.1 Streptococcus cristatus strain 771_SOLI 609_629_9647_236+,...,107_, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 628 35 97.2 30 -................................... GAACATAAACAAGGCTGTTACAAGAGGATT 563 36 100.0 30 .................................... GGTAAGCGCTGGTGTCTCTACAGGTTTGGA 497 36 100.0 30 .................................... TATCTCCTTTCAAAAAAAAAAAAAGAAAAC 431 36 100.0 30 .................................... CGGCGGTCTTGCCATGCGTCCTTACGTATC 365 36 100.0 30 .................................... TGATGAAAAGGCCCTTGAGTATGTCAAGGC 299 36 100.0 30 .................................... GATTTAACCGTGTCTAGTCTCAGGGCTTTT 233 36 100.0 30 .................................... TTATTATTGGTATGAAATGAGGGTTGAATA 167 36 100.0 30 .................................... CCTTTCCAATAATAAAATCAAATTCCGTTG 101 36 100.0 30 .................................... ACTCGGTTCAGGGCTTAGTTCTGGTGTATC 35 35 97.2 0 ...................................- | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 99.4 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : | # Right flank : A # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 26985-27218 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUTP01000130.1 Streptococcus cristatus strain 771_SOLI 601_27218_337309_154+,107+, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 26985 36 100.0 30 .................................... TTGTTGCTGTTGTTTACTTATTCACCAGAT 27051 36 100.0 30 .................................... GAACATAAACAAGGCTGTTACAAGAGGATT 27117 36 100.0 30 .................................... GGTAAGCGCTGGTGTCTCTACAGGTTTGGA 27183 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 100.0 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAACTCAATGACAAGCCCGAAGTCAAATCCATGATTGAAAAGTTGGTTGCTACGATTACAGAATTGCTGGCATTTGAGTGTTTGGAAAACGAGTTAGACCTAGAGTATGATGAAATTACCATTCTAGAGTTAATCGATGCACTTGGTGTCAAAGTCGAAACCCTGAGTGATACACCTTTTGAAAAGATGCTAGAAATTGTCCAGGTTTTTAAATATCTTTCTAAAAAGAAACTCCTTGTTTTCATCAATGCATCCGCCTATCTATCAAAGGATGAGTTAGTAAATTTGATAGAGTATATCCAACTAAATCAACTAAGTGTTTTATTTGTCGAACCTCGAAAAGTCTATGATTTTCCCCAGTATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAACAATTGGAACCTGACGAGCTGAAGTCTGGCTGGGACAAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : | # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 11557-11323 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUTP01000144.1 Streptococcus cristatus strain 771_SOLI 618_11556_136657_486_,443+, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 11556 36 100.0 30 .................................... AAAATTTCTGCGAGAGCTTGCTAAATACGA 11490 36 100.0 30 .................................... CAGAAATCTGAAGAAAAAGCCCATGCTGAA 11424 36 100.0 30 .................................... TACTTCATCAGGTGAGAATAGCTGAGTGTT 11358 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 100.0 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : | # Right flank : AATATTAAGTTTTAATTCAATTCAACCGTACTAGTTCAAGGTTGGTGAGGGAGTTTGTGTTATTTGCAAAAAATTTAAAAAGATTTGTTAAAATTGTTGACAACCACGGAGAACCCCGATACGATATAATTAGAAAGGAAGAAGATATGAAGATATGAGAGGTTGCCAAATTAATGGAAGCAACTGTAAATCTGTTAACAGGTGTTGCCAGTGTTTCCATGGTAATAAAAAAGAGCCAAAAGAATGTAAGTGACGCAAAGATAAACAGTTCAAGTAAGGCTCTGGTAGGTAGGGATGAAAGCCCCTTAGACCTTACCTCGACTATATCATATCAGATAGTACAATGAAATATTTACCAATTTTTACAATCGTATTTTTTGCTTTCTTGCTAATTTTAAAAGATAGACGGAAGTAAGGATGGAGTTCAAATGAGAAAGCAAATAGAAAAGCTATTAAACAGCGATATAAGCACAAGCGCAATCGCTAAAGGAGCAGGTGTT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //