Array 1 126556-124087 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABEGI010000091.1 Klebsiella variicola isolate k_variicola_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 126555 29 100.0 32 ............................. CAGCGCCTGGGAGGGATTCCGGATCCAGGTTA 126494 29 100.0 32 ............................. TCGACAGCCGTGACCATGATGCGCTGTCGAGA 126433 29 100.0 32 ............................. TTCGATGCTGACCTTAATATTGATTACGGTGA 126372 29 100.0 32 ............................. CATTTCAATAACGCGACAGTGTTCTACTGTTA 126311 29 100.0 32 ............................. AATTGGAGAGGTTTAATGTTCGGGATGCTGAC 126250 29 100.0 32 ............................. TTGGCTTACCCGGGAGATCAGTAACCCGCAGT 126189 29 100.0 32 ............................. GTAGTGAACATCAGAGCCAATGGTGATCTGCA 126128 29 100.0 32 ............................. TCCCGCCTCAACAATCCCCAGCGCATGACCAT 126067 29 100.0 32 ............................. TGTCCTCAATCTCCCACACTCGGCATGCATAT 126006 29 100.0 32 ............................. CGTGGTTTTGAATGGCAAATCGTCTTCTGACG 125945 29 100.0 32 ............................. GCGATAGAAACAGAGGGGTATTTTGGGCGCGG 125884 29 100.0 32 ............................. GGTTCGGCGGCGACGCTAAATCGGCGCAGGCG 125823 29 100.0 32 ............................. TTTTTAAAAAGGCGATAGAAACAGAGGGGTAT 125762 29 100.0 32 ............................. GTATAGAGAACGCCGCACAGCGCATTAACCGT 125701 29 100.0 32 ............................. GTGGTACGCCAGTTGTCCCGCTCCTGCTGCGC 125640 29 100.0 32 ............................. TTCGGCGACGGCTACGAGCAGGTCGCGCCGGA 125579 29 100.0 32 ............................. CATTATCGGGGCCGGTGAAATGCCGCGCCCTC 125518 29 100.0 32 ............................. CCCCATTACGGGAGGTGCTCTTGCCTGATAAC 125457 29 100.0 32 ............................. GTTGAACACTCAGGCGCCCTTGCCGTGAGCTC 125396 29 100.0 32 ............................. GGTTCATCAATCGCTCTCGTTCTGCCCGTTGA 125335 29 100.0 32 ............................. GCGATAGCGAATACTCAACATCGCAATATGAC 125274 29 100.0 32 ............................. CGCTGCCAGTGCAGCGGGACGGGGAAGACACT 125213 29 100.0 32 ............................. ATCGCCGGGGCGCTCAATACCGCCGCACTGGG 125152 29 100.0 32 ............................. CTCGTAGTGGTCAGGAGACAGAGTGATGGCAG 125091 29 100.0 32 ............................. GCGCAGCCGCTGAAAGTATCAGGTACTAAGGC 125030 29 100.0 32 ............................. TAGTAGGGCGGTGAGCCGTCTTGCTGTTCGAA 124969 29 100.0 32 ............................. CTTGAGGGAGTGGATAATTGACTGCACATCCT 124908 29 100.0 32 ............................. GCTCGTTGTTTTCCCGTCGAACGCGCCGGAAA 124847 29 100.0 32 ............................. GACCTCCCATGATTAACGAATATAAAACCGTG 124786 29 100.0 32 ............................. GCGGCACCTGGTCGATAAAAGGTGATGGCGAA 124725 29 100.0 32 ............................. AGCTCCGCATCCGCAGCAGAAACAAATCCAGT 124664 29 100.0 32 ............................. AAATATAATGGGAATTGCCCCGCTCCGGCGGG 124603 29 100.0 32 ............................. CGGGATCGCTGCCACCAAACGGCTGATAATGG 124542 29 100.0 32 ............................. CTCGCCCCAGTCCGGTTTGCTCATCAACTACT 124481 29 100.0 32 ............................. GCGGCAACGCCTCACAGATGCACAAATAAATT 124420 29 100.0 32 ............................. CGAAGACACGCTGGCACAGATTGCCGAGCTAA 124359 29 100.0 32 ............................. CATGTCAGCCCCTCAATGTTATAGCGCTGCTG 124298 29 100.0 32 ............................. TTCAATGCGGCGATAACTTCCTTTAAATCCAC 124237 29 100.0 32 ............................. GGTTGCGACATCGCGCCAGGTATTAATCACGG 124176 29 96.6 32 ............................A TCGACGATGTTCTGCGTGATGGTGATGTATGC 124115 28 82.8 0 ...........AT..-.........G..C | T [124102] ========== ====== ====== ====== ============================= ================================ ================== 41 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCACCACCTGAAGACGCACATCCTGTAGCTATCCCACTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTAGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTGTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTGCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : GCAATTAACAATCAGGCGCCATCTCATAGGCTGTTTGATGGCGCAGGATCAGCACCGCTTGCCACCAGCCCTGCGCCTGAGCTTTTTTGTGTCCTTTTGTCGGCAAAGCATTGGTAAACGCTTGGGCGGCGTCTCTATCCTCAGTTAGCGCAAAATAGGCCAGAGCTTTTGCTACTGGCCCGTGCGCATCAGGCGTCGTGCGAGCAGATTGCGTAGCCTGGCGTCGGCGCTTTCGCGCCCGGCATTTTTCGGCATATTAAGATCAGAAGGAGAAGGTGCCGGGACATATTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCACCCGTTCGGCAATGTGCGCGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCACATCGCCTGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTCGGCGTGAATACGGCAGACCGGCGTCACAAACTCCTCGCTGATAATGTCATCACTAGACTGCTGGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //