Array 1 1842-2690 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOLN01000112.1 Microcystis aeruginosa NaRes975 Scaffold112_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================== ================== 1842 35 100.0 40 ................................... CCACCCCCAAGGGAACATTTTAATCATGTAACTAAGGTAT 1917 35 100.0 38 ................................... CGTAACGAAACTCACCAATATCATCTACGATATCTAGA 1990 35 100.0 40 ................................... CGTGGGGTCGGGGGAGCGATGGGCTCTGGAGGCTCTGCTT 2065 35 100.0 41 ................................... GGGGTGAGTTCGGTGAACCCAATTTCCTCGGCCAGGGACTT 2141 35 100.0 40 ................................... GATATTGAGACCCGACTTAGGAGTGTTATTTGCACTCCTT 2216 35 100.0 36 ................................... ATCACGGATAGTTTGCAGAAATTCACGAGCGACAAG 2287 35 100.0 36 ................................... GAACATTCCCCATACCAGAAACAGAGACTCGCGCCT 2358 35 100.0 42 ................................... ACCAAGGGGTGCGATTAAAATTGAGGCCAGAACCAAGGCACG 2435 35 100.0 40 ................................... CATCTGGGCAGCCTTTTTTATTCTCTTTCACAGGTTATGC 2510 35 100.0 37 ................................... CCTCCGAAGTCGATCACATCCCCTGGATTAATCTCCC 2582 35 97.1 39 ..................................T AATGTGTAGGGTTAATTCATGAATTGACCCTACAATTTT 2656 35 77.1 0 T..AA........AA.T......C.....A..... | ========== ====== ====== ====== =================================== ========================================== ================== 12 35 97.8 39 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : TCTCCAAAAAAGTTGCTTCTTCCAAAAGTGATCGCTATTCCTCATCATCAAAAAGCGATGTCGTGCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAGGCCCTTAAATCTGCGGGTGTTAGTCCATAGGATCAGTTATCAGTTATTAGTTAAGTAGGTAGGCGTTAAAAGTTGTCAGATCCCCCCGCCTATCGGCACCCCCCTTATCAAGGGGGGCAGGGGGGATCGAACCTAAAATCCATTTTTAATTTAATTATAACCAGCTACTTATCAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGCAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGCGAATTATTATTAATAATGTCTATGCTTTTCAGTATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGCTTTGCAAAGCTAGT # Right flank : CGATACTTAATTAAGAAAAATCAATGAAAATAAAGATTGTTTAAGAAAAATTATTTAAAATTAACACAATAATTAGAAATTTAGTGATAGATATAAAAGTACAAAAGAGCCAATTAATCTAACAATCCTATTTTTTTAGCCAGAGATAAGTCTTTTCTAGGCCTTTTCAAGGCTGTTGAATATACCTCTTCAACAATCGAGTTTTCTATAGCTTTATGTCCAAATATATAGCCATCACCTTCTCCCCCGTCCAAAGCTTTATTGAAAAATCCCGCAAATTGAGGGACCTGTACGGAGCCTCTCAGATTCTCTCGGATCTGACCAGTACAATCGTCACCCACCGGCCCGAGCAGTACCACCTAATTAGCCCCGGACTGCTAAACTCCCAACAGGGAATGCCCAACCGTGTTCTCCTGAAAGTCGATAGCGAAATACAGTCCTCCTCCTCCGAGGACATCATTGCGGAACTGCAACGAGCCTTTTTAAATCGTTGGAAAAAT # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 1752-692 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOLN01000021.1 Microcystis aeruginosa NaRes975 Scaffold21_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================= ================== 1751 35 100.0 45 ................................... GAAGATATCGTTGCCGACCCCGGCTTGAAGCAGGATTTTCACCTG 1671 35 100.0 33 ................................... AGTGGTGCTGGAACCGGAAACCGGTCCATAAAA 1603 35 100.0 41 ................................... GCTGCGCCGGATACTGGACCCCACAACAGTCCCAAGGGACC 1527 35 100.0 35 ................................... GCCCCTTCGGCCACAATCTCCTTTTTCTCATAAGT 1457 35 100.0 37 ................................... CTTCCTAACACACCGTTATCCTCCAAGTTATCCCAGA 1385 35 100.0 38 ................................... GAAATCTTTGGTTTCTGCAAAGAAACTTACAAAGAAAC 1312 35 100.0 37 ................................... TTTGAATAACGACTTCCTTGGCGGCTTCCAGCGGAAT 1240 35 100.0 43 ................................... GGTGACGTATGCGGCTGGGCCCAATGTCCACCACAGCCATAAG 1162 35 100.0 39 ................................... AGGTAGTTCCCCTTCAAGACGTACACCCAATTTCTTAGG 1088 35 100.0 36 ................................... CCTGATGGTGACCTGTAGCTGCACAGTGACAGGAGC 1017 35 100.0 36 ................................... CCAAGGATCCCAAGAATCACAAGGATTCCAAAAATT 946 35 100.0 37 ................................... CCAAAAGGATTTTGAATCGCATCTGGCACATCAAAAG 874 35 100.0 39 ................................... AACAAACAGTTTTTGCCCAATCAAAGGATCGATGCCATC 800 35 100.0 39 ................................... GATGTGTAGGGTTAATTCATGAATTGACCCTACAATTTT 726 35 80.0 0 T..AA........AA.T......C........... | ========== ====== ====== ====== =================================== ============================================= ================== 15 35 98.7 38 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : AGGAGGAGGTGTATATTGGTAGCGCCGATTGGATGACGCGGAACCTGAGTCGTCGCGTGGAAGCAGTGACACCCATCGATGAACCAGCGATCGCCAAGGAACTGGAAGAAATTCTCGGCATCATGTTGTCAGATAACCGACAAGCATGGGAATTACAATCCGATGGCAGTTATATTCAGCGTCGTGCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAAGCCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTGATCAGTTATTAGTTATTAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGAAAATTATTATTAATAATGTCTATGCTTTTCAGTATCCCACGAAAAATCGTTGTACAATCGTACAGCCTAGCTTTGCAAAGCTAGT # Right flank : AGAATGCCAGGGATCAATCCCATCTCATCGGTTAAGAAAAATCCGAGATTTCAGCGAGATTATGCGTCAGTGGGGACAACAATTTCAGAGGAACTTTAACCAGACTGAACTCGGCAGAATAATTTATGCGGGAGGAGATGATTTTTTAGGCATCGTTTATAATAGCCAATTTCCTGATCCACAACTCGACTCGATCGAGATCGATCGAGTTTTCCACTGGCTACAAACCCCTCATAAGTAGGGTTTGCTGAATAAATGTGAAATGTAGGCAAGGTCAGGGTTTTGTGGCTTTTCTCGTGAAACAGGTGCAAGATTTTGAGAGAATCGTGCTTCAAAACCTTGCGTCTTCATCGGCCCGCGTCCTGTAGGGGCGAAGCATTCGGGCAGTAACCTATCGGTGAAACCGTAGATTTTCTATCCGAATGCTTCGCCCGTACTTTTTCAGCAAACCCTAAGTAGCGATCGCACTTTCAAAAGACCAAATAATCACATTTAAAGGA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 128-2752 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOLN01000205.1 Microcystis aeruginosa NaRes975 Scaffold205_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================================================================================================================================================== ================== 128 37 100.0 34 ..................................... TCGCTACACACGAACTATGATGATGCAATCGAGC 199 37 100.0 36 ..................................... TATGCCCCCTAACGGGGGCTTTAGGAGGCATTATGC 272 37 100.0 35 ..................................... ACTGTGGCGAAATCTGTTTACCCGTCGAGAGCCTT 344 37 100.0 36 ..................................... GGCTTAAGCTTGATTTAGCCTTTAAATCTCGCACCG 417 37 100.0 35 ..................................... TCCTCTTTTTTTGTGTAAAATAAAAGCAGTAGGAG 489 37 100.0 36 ..................................... GCACCCACCGCAGCCGGAGCCGTAGCCCGCGCAAAT 562 37 100.0 36 ..................................... CGGGAAAAAAATTCGCCAAGCTGATCGAGAGTACGA 635 37 100.0 34 ..................................... AGAAAATTAGTTGACGCTAAGATTGATATTCCAG 706 37 100.0 34 ..................................... TTCAATAATGTAATTTTATCAATTACCCGCGATG 777 37 100.0 39 ..................................... GCCCAATCGCCAAAGTGCTATGATAAGATATGTTATCAA 853 37 100.0 42 ..................................... GGGAGCAATATAGGCAATATTACCCCTAATACTATCACGCCA 932 37 100.0 34 ..................................... CGATTAGAATTAATCTAAATCTCCTCCGGACTGA 1003 37 100.0 35 ..................................... TTAGTTGCTGGCCCAATGAAATTAGTAAAAACTCA 1075 37 100.0 35 ..................................... CAAAGTAGTGTCGGCACTTTTTGCTCTTATGATGC 1147 37 100.0 35 ..................................... CTTTCTTTTCTGTCTGTAACCGCCGGACTTGAGAG 1219 37 91.9 164 .................................GG.G CATCTCACCTTTGTAACCCCTAAATCAGGTTTTTATGTCAAGCTATTTTGAAAGCCTTGCTAGAAACCAGTTTTGGGGATAAGTATAATTACTCACTTGCGTAAATGAGATGCTCCCTAGGGATTGAAACAAAGGCTGATGGTGCTTTCGATCGCATCATGCTG 1420 37 100.0 34 ..................................... TATTGAGCCTGTAAGTCGGGAATTTAAAGGTAAA 1491 37 100.0 35 ..................................... GAGAAATTTGGTAAATTCTGATTGAAAAAGTAGCT 1563 37 100.0 35 ..................................... GCAAAGGGAGATCAAAAGGAAGGAAGCGGAGTTGG 1635 37 100.0 33 ..................................... TTGATTTGATAAATGGCGACTTCAATTTTCTCG 1705 37 100.0 35 ..................................... TTAATAGCTAAGGCGATTGATTCCCAATTTTTAGG 1777 37 97.3 35 .......................T............. TTGCTAATTGCACAGCGCATTAACCTACATGATTG 1849 37 97.3 34 .......................T............. CTCACTTCGTGTTACTTCAATACACTTGATCCAT 1920 37 97.3 35 .......................T............. AGAAAGATAAACCGGCCTCTAGGATAATCAGCACA 1992 37 97.3 34 .......................T............. TATCTTTAGGAGAAGCATCAGATAGCCACAGAGA 2063 37 97.3 37 .......................T............. ATTCAGATAATGCAACTCCTGAACTGAACTCTTTTTT 2137 37 97.3 33 .......................T............. GTAGCTGGGATTGTATAGAAAGCGAATCTTCTC 2207 37 97.3 40 .......................T............. TTCTCCCCAGCAATCACCGGGGGATTCATTTAAGCTTCTG 2284 37 97.3 37 .......................T............. CATCGGAGAGATTAATTTCATAAGTCCGCTCGATCCG 2358 37 97.3 35 .......................T............. AATCAGAATATTTTATCGGTAAAAACTGATTTATC 2430 37 97.3 35 .......................T............. TGCCAGATAAATCCTTATCGTAAAGTAAAGCGACT 2502 37 97.3 35 .......................T............. AAACGAATTTTAGACGATCCAGACAATGACATTTA 2574 37 97.3 33 .......................T............. AATTTCTTGGATGCAAAAAATAACCCCTAGCAA 2644 37 97.3 35 .......................T............. GGCTGTGCCAGTGTGATCGGTGCGGTTAGTGCCAG 2716 37 94.6 0 ..................A....T............. | ========== ====== ====== ====== ===================================== ==================================================================================================================================================================== ================== 35 37 98.6 39 GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Left flank : TGACCACTGTTACATTTGGTAAATCGAGGAGTTGATCAAAATTTATCCACATAACCCACCTCCTGTTCTGTGTTACTATTATACCATGCTCACACAGAACCTAGAAGAGCCTAGATTTTTGATCTGAG # Right flank : CTGGAACTTGAAACCTTCTAGTCTATTAATTTCAAAATGAGAATTGCTGTCAGTGAGTTTATCGAACTGCTTGCGTCCAAAATATCCTATAAATTAGAGGAAGTATAAGCTAATTTGTATTGATAGTAAATCTGTTTTTAATAGTATGAGCAACTCTCAATCGCACGCTAAAAACCTTCTCCCTTGTTCCTTCTCCCCACTTCTCCATACCTATTACCTAGCATTATTAGTATTCTATAATACCAATGCTTAGGAAACTATAAAGAAAATCCCAAGATTAGGCGAGTCCCTTGGCGAAAAAGGCTATAGTAGCATAAAATCCGTAATTTTATCCACAAAATTGTTATGACAGTTACCAATAGACAAGAGCTAGAAGAACTGATTCAACAGGTGAAAAAAGCTCAACAACAATTTGCCAACTATAGCCAAGAACAAGTAGATCTTATCTTCAAAAAAGCGGCATTAGCAGCCAACAACGCTCGCATTCCCCTGGCTAAAAT # Questionable array : NO Score: 8.76 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:-0.34, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Alternate repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 1751-134 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOLN01000293.1 Microcystis aeruginosa NaRes975 Scaffold293_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================================================================================================================================================ ================== 1750 37 100.0 36 ..................................... GAAGAGGGGGAGCGATAAAAGCAAGCATTAGAGCTA 1677 37 100.0 36 ..................................... TCGCTGCTTGGCTTCATACTTATCCAATTCATTGAA 1604 37 100.0 34 ..................................... TTCCTTTTTCCTTCTCATCAAGCAGTGATCCATT 1533 37 100.0 35 ..................................... GGGACGATCCACCCTTTAGCCAAAGGGATCACCCA 1461 37 100.0 34 ..................................... TGGAGAGCCGAAAGGATGCACGGGCTGATCAGCT 1390 37 100.0 33 ..................................... GACAAACGTTGACAAAAAATGTAAACTGGTAAG 1320 37 100.0 34 ..................................... ACTACACGGAACCCCTGCCAATTGCATCCATGCA 1249 37 100.0 34 ..................................... TTAATTAGATCGTTATCCTCAATTTTAATCTTGA 1178 37 100.0 34 ..................................... ATTATCAGGAGCAATATAGGCAATATTACCCCTG 1107 37 100.0 37 ..................................... GCGAAGTTAGCGGCTCCTGTGGTTGAGCCGCAGCCGA 1033 37 100.0 35 ..................................... GCGATCGCTCTTGCATCTTGGGGAGTGAGGGCTAT 961 37 100.0 35 ..................................... CAACAAGGACGCACGGAATCCATCAGCGCACTAAA 889 37 100.0 34 ..................................... TGAAAAGGAATTGGGCGCAATTCCATATACTCAA 818 37 100.0 34 ..................................... TCGTGATACTTTTTTTATCCGCGTATCGTGGGGA 747 37 100.0 43 ..................................... GGGAGCAGCGGCAGCCCTGTGTACTTGAGATATGAAGCCGCCA 667 37 100.0 35 ..................................... ATATACCACCTCCTTCTTTTTGAGAAGAACAATTT 595 37 100.0 34 ..................................... CGGGAAGAAACATAGTTTTTACCATTATCGGTTT 524 37 100.0 35 ..................................... ATCGGCTGCGGCTCAACCACAGGAGCCGCTAACTT 452 37 100.0 172 ..................................... AGTTTGCGGAGGATGATTTAGGGGAGCCTGATTGTGATTGTTCGGGAGCATCTCACCTTTGTAACCCCTAAATCAGGTTTTTATGTCAAGCTATTTTGAAAGCCTTGCTAGAAAACAGTTTTAGGGATAAGTATAATTACTTACTTGCATAAATGAGATGCTCCCCCTGATT 243 37 100.0 36 ..................................... CACGTTAGGTGGCATCCTGAGAATCCTAATGATATC 170 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================================================================================================================================================ ================== 21 37 100.0 42 GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Left flank : GAATGTTTGAATGATGCCCATCTGAAACATAAAAAAGAACTGGATTCCTTGCTGACTCTACGATTTCAGAAGTTTAATAAATCTCAGATTATGAACGTCTAAAGTATATCTTAGAAAATACCTATAAATCCC # Right flank : CCGATCAGGAGATTATATTCTAGATTTGGCTCTTCTGGTTTTCGTGTGTTAATTTTTGTTATGAATTAAAGCAAGCAAACAGCTTAAGTCGAAGATGTTGAAAATTGGTAAATCCATAACTCATTCTTTTAATA # Questionable array : NO Score: 8.61 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:-0.64, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 1 23762-22220 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOLN01000036.1 Microcystis aeruginosa NaRes975 Scaffold36_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================================================================================================================== ================== 23761 36 100.0 39 .................................... CATCAAAAGCCTTATCCCAAGTTTCCTTAAGTTGCTTTT 23686 36 100.0 39 .................................... TCTATACTGCCGATCAATATAGAGGGATCCCCCTCCTCA 23611 36 100.0 40 .................................... TAGGGTCGCTGGTAGGCTGTACCAAGGCGATATAAACGAA 23535 36 100.0 36 .................................... ACTCCTTTCAGCTTCTCAGTCTCAGCCGATATTTCA 23463 36 100.0 39 .................................... GTCGACGAGACTACCATTTGCTAATTTCAACTGGTAGTC 23388 36 100.0 35 .................................... AATCCTGATCTGCTCATCCGGCGATGGGTATAACA 23317 36 100.0 37 .................................... AGCCAAATTATAAAGAGAAGTCGATCGCTCCCTAATC 23244 36 100.0 36 .................................... TTGATCATGATGAGATCAGGCGATTAAAAGCCGTTA 23172 36 100.0 43 .................................... CGGTGAGGGCGAGCAGCCCGGCCGGCAGCGCCTGGGCGGGGGC 23093 36 100.0 42 .................................... TCGGTGTCTTCATAAATAAAGTCGTCTGTAGGCTCATTTGAT 23015 36 100.0 37 .................................... AGTTCATCAAACGGATCTTTAATCTCGTGATAGCCTT 22942 36 100.0 38 .................................... AATTCTTTAAATACGCTCTATCTAAAGGTAGATAGTTA 22868 36 100.0 36 .................................... TCGATCAAGGTGCATCCAACGAAACAAGATTTTTTC 22796 36 100.0 39 .................................... TCGTTCTCTAAGTTTTCTGACGAAGACTTCTCCTTTAAA 22721 36 100.0 41 .................................... ATGAAGAGGTTATTAGTGCGATTGTTAATACGATTCCCACT 22644 36 100.0 39 .................................... GGTAGAAACCATCGAGAGATTTGGACCCATTGGACGGCT 22569 36 100.0 38 .................................... TTCAAATACTATCCGATAGTTATCGTAACTAATAGTTG 22495 36 100.0 134 .................................... TGAGCGGCTATCCTATCCAAGAAACAATTAAGCTTAAGCTTTGTTAAGGGTTGAAACGATCACTTGGATAAACCTGATATTTTCTGGAATATCGAAACAATTAAGCTTAAGCTTTGTTAGGGATTGAAACATCT 22325 36 100.0 34 .................................... TGAGAGCCAGCTATCCATATCTGCCTTTGACTGA 22255 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================================================================================================================== ================== 20 36 100.0 43 CTCTCTACTCGCTAGAGTAATTAATTGAATGGAAAC # Left flank : TAGTTAGCTAGATTGAACAAATTTTTTGACAAAAAGGCATAATGGTCGATTTCTGACCAGAAGGGATGGTTTTGACTGATAATATGACGTTCAACTAGCTTCATATCTTGATTATACCTGATAACGTTCTTAAAATCTATCGGGGGCCAAAGTTACTTATTTTAGTTATCTAGCTACAGAAATGAGTAGCTTTAAAAAGCTTTAGGTAGGTTTTTGGTTTCTGTGGTTAGCTCCGAGGGCTAGAAAATCCGATCAGGACTGGAAAAATTAGCCGATCGATCGAGGGGTTAAATTATTGGCTTTTTAGGGTATCATCGACTAGCGACGGATAGGGGTGGGAGCAGATAACCTCGGTTTCCGGTAAAATCCCTCGATCTACCACAGGATAAGGGTTTTGTGGTTTATGGGGTTGACGGTGCGACCGTATCTAGCTATAATTAACTTATCCGTCGCAACTGGCTTCTGAACCTCAATCCTGTTCGGACGTTTGCCTACTGGCT # Right flank : CCGCTTTAAATTTTGGATTGAAATTTTGTGTTTATCTCTCTACTTGCGCTTAGACATTAGCTGAATCTCCCCCAATCCCTTTCCTGTTGACCCTTGCAAAAGTGCCTCATCTCAACAGGCAATTTAAATGCGCGGGCAGCTTATTCTATATAGTAATGTTTAATTGTATTCCCACAAAAGTTGCTTATGTCCTTACCTGAACTCCCTCTTCATCTTCAATTAACCCAAATGGTTTCGGGTTACTGGCTATCTCAGGCCATCTATGCTGCGGCTAAATTAAGTCTAGCCGAGCATTTAAGCAAAGGAGCGAAATCCTGTCAAGATTTGGCCTCCCTAACTGAGACTAATCCTGCTGCTTTATACCGACTGATGCGAGCATTAGCTAGTGTAGGAATTTTTCAAGAGACTGAATCTCAACAGTTTATACTAACTCCCTTAGCCGAACATTTATCTAGTGACCATCCCCGGTCAGTAAAAGCGACAGCAATTATGTTAGGAGA # Questionable array : NO Score: 2.78 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.47, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCTACTCGCTAGAGTAATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 2429-1662 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOLN01000047.1 Microcystis aeruginosa NaRes975 Scaffold47_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================================= ================== 2428 35 97.1 37 ......................G............ GTCCGAAGATTTCGGATTGTTCTGGGGGTATTAACAT 2356 35 100.0 36 ................................... CCCTATAATCACGCAGAGCGTGATAAAGGACAATTT 2285 35 100.0 37 ................................... ACCATGCTTCTTTTCATCTTGTCCTTCCAGTCCCAGT 2213 35 100.0 36 ................................... TAAGCTCCTTCAGCCCAATTAAATTTCCCATCCCGA 2142 35 100.0 37 ................................... TCTTGAGGGTCTTTGGTTGGTTTCAACCAAACAAACT 2070 35 100.0 38 ................................... ACCCACACCGTGGTATTTACAGGCACTGGTGCTAGAAA 1997 35 100.0 36 ................................... ATAATCACGTCCTTCCCCTTTTTTTGGGGAGAAAAT 1926 35 100.0 37 ................................... AACTGCAAGTTGGCGGTCAAAGTCGGGCATTGAATTC 1854 35 100.0 39 ................................... GCTGCTGCTGCTCTAAAGCAGTATTAAGCCGCTCCAATT 1780 35 100.0 49 ................................... AAGAAAACAGGGAATTCAGAGATTTGACTTTTACGATATTCAATATCTG 1696 35 91.4 0 ................................GTG | ========== ====== ====== ====== =================================== ================================================= ================== 11 35 99.0 38 CTTTCATCTCTTACTCCCCGCAAGGGGACGGAAAC # Left flank : TAATTTGCCAGTGAGTTTGGAGATATTCTCCAAATCTATTGAGAACTAAGTCGGAAAGCGCATCTGAGGCAAGAGTTAGCCCAAAAGTGCCGAATACCAAGAAAAATAATAAGCTTTTTCCAGGGTCGGCCAATCCTTGAACGAGACGATTATTCATAGAGATTCCTGAATCGTGTCAATTCTAGATTGACATTATATATTATCTGAGAACGGTGGATTTTTACCTGACTATTAACTATAATGGTGATCGCCACTGCACCTTGACAAATCTATAGAGTTTTCCCCTTTCTTCGATCCTTCCTTCGGGGCAAATCGACGCACCTAACCCCACGGTCTGAAAGACCATATTTTCCGTCGAGGTGCGTCGATTCCTCTCCCCGTCTAGGTTTCAGGCTTCAAAAAAACAATGGCGATTAGTAACTCTCTGCGGTAAGCTCTAAATAGGGGTGCGTCGATTTAGCGTCTAGAAACCTTTCGTGACAAGACTTCCTAGAGTAGCT # Right flank : GACAATCTACCAACGGATAACATGGTTGGTCAGAATTAACTCCTTTTTTTACCCACTTATAGTAAAATTGTTCTTAATAATAAACCCCAGTCGCGGGTTCGGTGCGCCAACACCAGAAGCCCCACCGGGAGTAACCTGTAGAAGAGGTCACAATGAGTATTTTACGTTACGAAGAAAACGGAATTGAGTTCTTCACCCTAGAGGCTACGGGTGAGTCAGGAATGAGTCAATCTGGTTTAGCTCGTTTGTGCGGAGTCAAACCACACGCAGTCAACCAGTTGGTTAATTCAGTTATCACGAGTTCTAGTCCAGAATTCTTGAAACCCTTACAGGGAGATGAATTGACACTTATCACGAGTGTCAACGAGTTCAACAATGCCACCATCCTCAAAGACACCGTTTGCGCCTGCATCTTAGAATGGTACGCCTTTGAATCCCAGCGCCCGACAGAAGCAGCCCGCCAAGCCTTCCGCAAATTTGCCACCTTCGGCATCCGAAGC # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCATCTCTTACTCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 5310-5832 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOLN01000005.1 Microcystis aeruginosa NaRes975 Scaffold5_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ==================================== ================== 5310 35 100.0 35 ................................... GAGATTGCCGAAGATTTTTGATCCAAGGGTTTACC 5380 35 100.0 36 ................................... AATTATTGCATTGTACCATACAATGCTATTTTCCTC 5451 35 100.0 34 ................................... GCTTTACAATCAATTTCAAAATCTAAGTGTATGG 5520 35 100.0 35 ................................... CCTGTAGGATAGTGCCCCTTGCCTTTCAGGCAAAA 5590 35 100.0 35 ................................... CTGGCCAAATGATAGTCAATTGGTAATCTGTTAGT 5660 35 100.0 34 ................................... ATTATTTTCCTGCAGGGATTCTCGCCACTCTTCA 5729 35 100.0 34 ................................... CATTTACCTCTTTACTGGGCTTGTCCAAAAGTAT 5798 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ==================================== ================== 8 35 100.0 35 CTTTCATCTCTTACTCCCCGCAAGGGGACGGAAAC # Left flank : AAAATCCGTTACTGTAGGGGCGCAAAGCTTGCGCCCTCCGATCGATCAGGTTTGCTGATCACTCTAAGTAGGGGGAGAGCCTTCGAGAGCCTCCGCAGCTAAGGGACTTGCGCTTTGATAATATGCCATCTGGCTGGTCTGATCCTTCTACAGAGGGATTTTCTGGCTGGGATATTATTCCCACGCAAGTCGCTATTATCTGAGAACGGTGGATTTTTACCTGACTATTAACTATAATGGTGATCGCCACTGCACCTTGACAAATCTATAGAGTTTTCCCCTTTCTTCGATCCTTCTGTCGGGGCAAATCGACGCACCTAACCCCACGGTCTGAAAGACCATATTTTCCGTCGAGGTGCGTTGATTCCTCTCCCCGTCTAGGTTTCGGGCTTCAAAAAAACAAAATATGGCGATTAGTAACTCTCTGCGGTAAGCTCTAGATAGGGGTGCGTCGATTTAGCGTCTAGAAACCTTTCGCCACAAGACTTCCTAGAGTAGCT # Right flank : CTACTAAAATTGCTTTAACAATCTTATTAAAAATGTTTTTGCTGAAAGAATCTCGCTCTTTTTTTAGACAGGGATGGACGATTGCAGTTTTACTAATTGCCCTGCTTGTTTCCCTGCCAATTTTATCGGTGGCCAGTAGTTTATTAACTAATTCCAGTCAAGTCTGGCAACATCTGATCGAAACTGTTGTCTGGGATTATCTAGTTAATTCTTTTTGGTTAATGAGCGGGGTGGGTAGCGGTGTTTTAATCATCGGTGTTGGCACAGCTTGGTTAATAACGATGTGTCAATTTCCCGGTAGTAAACAATTTCAATGGTTATTATTACTACCCCTTGCCGCTCCCGCCTATCTCTTGGCCTATACTTATACCAATATGATGGACTATTTTGGTCCGGTGCAGACCTTCTTAAGAAGCGTTTTCGGTTGGAATAGTGTCGAAGATTATTGGTTTCCTAATATCCGTTCTCTTTGGGGTGGGATTCTGATGTTAATACTGGTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCATCTCTTACTCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 6338-2295 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOLN01000083.1 Microcystis aeruginosa NaRes975 Scaffold83_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 6337 36 100.0 35 .................................... TCAGTTCACCTGCTAAAAACGAGTTTAATTTGGGC 6266 36 100.0 34 .................................... GGCGGATGGAGTAGATTTAATACAAGAATTTACC 6196 36 100.0 36 .................................... ATGCTTTTACCAAGATTTATCAATCAATTTACGACG 6124 36 100.0 35 .................................... AATACAGACGAACTGCTTAAAGCGGCTAACGATCG 6053 36 100.0 36 .................................... ATGCAACAGGATCAGGTGCGGGTGCGGAGGCATTAA 5981 36 100.0 35 .................................... ACTCTTAACTATTTGTATGAAAGCCTGAACTGACA 5910 36 100.0 37 .................................... AACCTCCCCGACAAATTGACCAATATCTCGGTTATCA 5837 36 100.0 37 .................................... TACTTTATTTAGCCCTATACATATAGTATATTGTATT 5764 36 100.0 36 .................................... ATATGTAGTAGGTTGACATACCCAGAATAATACAAT 5692 36 100.0 35 .................................... AATGATAGCCGTTCTTATTTCGCGTTCTTTTAGAC 5621 36 100.0 37 .................................... GATAAGGCGGCTTTTGAGAAATTTACAGGCTTTAAAA 5548 36 100.0 34 .................................... AATCAGGGGACTAATAAACCCCAGAAGGTGATTT 5478 36 100.0 36 .................................... CTTTTGGCTGCATTGTAAAAGAAATCAAGTTCAAGC 5406 36 100.0 35 .................................... TATAGGGCTAAGATATAAAGTACATTATCTAGTCA 5335 36 100.0 35 .................................... AAGCTATCTACTCTCAAAAAAAAGCTATCTCAATT 5264 36 100.0 35 .................................... AGTTAGATTCAAGTTAGCGCTAACATTATTATTTA 5193 36 100.0 34 .................................... CCAGATTATAAGTAAAAGATTTAAAGGTGTGTGT 5123 36 100.0 36 .................................... TTGATACATTTGAATCCTTCGGATTTAAGCTAGAAA 5051 36 100.0 35 .................................... AAAGGTTCTCAGCCGATTGCTTCGGAGAGCAGTCT 4980 36 100.0 35 .................................... CTACTAGCGATCCTTTAAAGTATAAATTAGTGGAA 4909 36 100.0 35 .................................... AGATAAACACCAGCCACACCAATTAAAAGCATCCA 4838 36 100.0 33 .................................... ATAAGAAAACACCAACACCAGCTAACCCTGCGA 4769 36 100.0 35 .................................... TTGCCGATTATGGAGTTGCTGAGTAAGGAGGGGAT 4698 36 100.0 34 .................................... AAGCCCACTACGCCCAAAATGAAAATAGCAAGCG 4628 36 100.0 35 .................................... AAGCAAGGGAAGCAGATGGTCCACTTCCGCAAACC 4557 36 100.0 35 .................................... TTATTGATGTAAAATCCACGGTTGTTACTGCCAAT 4486 36 100.0 35 .................................... TACAGGAAGTCACCGCGATCCACTTCCTTCTAGCA 4415 36 100.0 38 .................................... TAGCCAAAAGAACAGGGGTAAGCTTAGATGCACTGGTA 4341 36 100.0 36 .................................... TCTCTTTTGGGTACAACGTCCTTAAGACAGTGCCTT 4269 36 100.0 34 .................................... GTAAAAAACTAAGTTCTAAGCAATTAGACAAACT 4199 36 100.0 37 .................................... CACTCGAATCAATGAATTTACCGCTAATACTCCGATC 4126 36 100.0 36 .................................... GAAAATTCGAAAGAATTACTCTCGGAATCAAAAGGG 4054 36 100.0 35 .................................... CTTGCATCGATAAAATTCCCCCGGAAGCTTTGGGG 3983 36 100.0 36 .................................... TATGGGGAATGCCAAGCAGAAAAAGCGATAAATCAC 3911 36 100.0 35 .................................... AGACTCGTTTAGCCGTTAAATTGAGCGATTCGCCG 3840 36 100.0 36 .................................... GTACGGTTGCCATAATTAAAGGATTGAATGTAAGTA 3768 36 100.0 37 .................................... TCACTGTGGCTGTAGCCGAATCTCGCTGGATGGTGGT 3695 36 100.0 38 .................................... GATTACTAATACCCAATCCAGAAAAAGGCTTTTATCAG 3621 36 100.0 35 .................................... AACCTCTCGCGTCTCATCCTGATCGTGGGTGATGC 3550 36 100.0 36 .................................... AAGCGCAATCCCCCTTCCCGGTGGCAAGATTTTGGC 3478 36 100.0 34 .................................... AATGCTGTTCAGGCTTCGGCAGGAGCCACAGTAG 3408 36 100.0 37 .................................... GGCTGGTGAAGCATTTAGGTCGATGCAGTATAAGGAT 3335 36 100.0 37 .................................... ACAAGGCTCCGGTAAAGGTGTGTGAGAAGTCGCGGCG 3262 36 100.0 36 .................................... TATCACAACAGTAGTTTTGTCCCGACTAAGGCAAAT 3190 36 100.0 34 .................................... ATTTTATATTCCTTAAGAGGGCAGTACCCCCAAC 3120 36 100.0 37 .................................... AAAGCTTTACAGAAGGCAATGAGACAAATTGGGTTAG 3047 36 100.0 36 .................................... CTAGTGGCCAAGGAAAATTCTTGGCATCCCGTTCGT 2975 36 100.0 37 .................................... CTTTATTTGGGCAATTCCCCATCAAGATTAAAATTGG 2902 36 100.0 36 .................................... CTCCTGGTTCCGCAGGAGTTACCAGCCAGCAAATTA 2830 36 100.0 34 .................................... TATTAAAATCACCGACACGGGACGGCATTTGTAC 2760 36 100.0 35 .................................... AAAGTTTTGCACAAACTTATTCCCCTGAAAATTTT 2689 36 100.0 35 .................................... AATCTTTTTAGGGGCAGAGGTGGCACTGGTAACGC 2618 36 100.0 38 .................................... CATCTGTGTTTCGCCTGTCGCCAGCTTGAGAAAAAATA 2544 36 100.0 36 .................................... GGATTTATTACTACGCCGGACACGGATGTTTATGCA 2472 36 100.0 35 .................................... AATCACTTTTGTTTGCAATTTACGATCGGTTTATT 2401 36 100.0 35 .................................... AGAGGCTAGTCGCAAAAGTATTTCAATCTTTTCTA 2330 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 57 36 100.0 36 GTGTACTAACCTTTGATGCCGTAAGGCGTTGATCAC # Left flank : GTCCGCAACGCTGGCGTAAAGCTTACAAAATTTTAGGCGGTTACGGCGATCGCATTCAATACTCGATTTTTCGCTGTTGGTTAAGTGCGCGAATGCGAGAAAAATTGCGCTGGGAATTGGAAAAAGTCCTCACCCCAAAAGACGACTTAATTTTAATTCGTCTGTCGGAGCAGTGTGTGCGCGATCTGCCTAAGTACAACCGTCCTAACACTTGGCTTTTGGACGAAAAAGGGTTTCGGGTAATCTAAAAAAAACAAGCATCTCTGGCTGGGAAAAAATCCACGGGCTAAAATTTATTTGTATTGCTAATGCTGTCTCGGTTTCAGGGTTTGACAAGGAACAATTCCTGCTTGCATTTTCTAAAAATCTCACTGGATAACGGTTTTCAGATTCGGTGCTGTCACTCAAAAGCTCTGATCAGAAGATTTCTTGGCGTTTTTCTAGAGGTGCTTGTAAAATGGACTGTGAAGCTATACACCAAAGGCTTTTTCAGCCTCGCC # Right flank : AAAGACACCCTACTGAACTGTTTCAGCTAAAATAGAGCAATAAATTTGAGCTTAAAGTCTTAGATTATAGAATTTATAGCATTTTTCTAATACACCAAATTAGCTGAAACAATCCACTACAAGAAATTAAGTTTATTACCCCTTCGGTGTGATAAAGTGGGAAGCGGAGATAGACGATAGAGTTGCTCATTTGTAGGGGCTGACCGATGAGGAAATAAAGATTATTAGGGGGGAGTAAATCATGAGTACAGAAGAGGAAATTCTCAATCAAATAGCAAACTTCACTTCCACGGAATGGAATATGTGGAAAAAACAACAAGAACAGAAATCATTACACAGGTTGTCTTTTCCAGGCTTCCATCGATTTTCAAATAAAAACTTTCAATATTTTGATTTCTCTAAAATAGATTTTCCTTCTAATGAAATATGGAACTGTGATTTCAGTAACACTAATTTAATTGAAGCCACCTTAAAATCTACTAAAATTTATCAAACCGATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTACTAACCTTTGATGCCGTAAGGCGTTGATCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 204-1272 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOLN01000168.1 Microcystis aeruginosa NaRes975 Scaffold168_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 204 36 100.0 36 .................................... ACAAGTATTGAATCCGGAAATATTGGAGAAAGCCTT 276 36 100.0 33 .................................... AAACGGACAAAGAGCTCGTTCACGACACTCGTG 345 36 100.0 34 .................................... GGCTGATCGTTATCTTGATGCTTTGGGCTTGCGA 415 36 100.0 35 .................................... TTGGAATTACCGTCTAAGCGGAACCAATGACTATG 486 36 100.0 36 .................................... GATTATCAACGCCTTCCTCATGGATCGTGATATCTC 558 36 97.2 35 ..................................C. ATCGAGTGGTTCCACGCAGGCTCTTCTCTAAACTG 629 36 100.0 43 .................................... TTCAAGGAATTTTATCTGAAATCTGGGAGATTGTTAAAACTAC 708 36 100.0 41 .................................... GGACTAAAAGGGGATAAAGGAGACCCTGGGGATGCTGGTAT 785 36 100.0 42 .................................... CTGATTTTCTTGCTATGGGCTTCAGTCAATCTAGTCTAGAAC 863 36 100.0 39 .................................... CAAAATCAAATTAACTCGTAGCAACGCAACTAAGCAAGT 938 36 100.0 39 .................................... AATCTTATCTCGAGGCCGCTGTGCGGGGCATATCACTGG 1013 36 100.0 39 .................................... GAATTAGGCCCTGTAACTACAGAATTTTACGATGGCCGC 1088 36 100.0 38 .................................... GTAGCCCAGATCGGCTTGATTCTGTGCTTCCAGAGGAA 1162 36 100.0 39 .................................... AAAAAGAAATTTCTGTTTTAGAGCGGCAGAAATACAAAG 1237 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =========================================== ================== 15 36 99.8 38 GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Left flank : CTGAGCGACTTAGTTTTTGCTGCGCTTTTTTCTGGCTTGAGATTTTAGGTTCGACAGCAACTCCTTGATTGTTTTTTGAGTTACCCCTTGACAATCAAGACAGTCGCTACGTTCATTTTATATTTAATTCCACCCACCTACTTATAGATATTTCGACAAAATTGAAAGGCAGAAAAAGGGTTTATAAAGAAACCCTTTTTCTAG # Right flank : GAGTACCCCTTGGAAAGTCTCATCGAGAGGGGAAGACAGACCCCCAAATCGACGCATCTCCAAAAAGGTGGTCCTGGGGGGGGTAAAAGTCCCGATACCAAAGGGTAGAACCCTGACTGGGAGAGCAATCGACACATCTAACCAGAGAATCGGGGTTTTAGGTCGGGGAGAGGGTGCATCGATTTTCAGTCAAGAGTTGGGGGACAAGCTAGATGATGTAGAGATTTGGGGGTGGTTGAGGAGGAGAACCTCCCATCACCAACAATCTAGAGACAGCTTCTTCGGGAATCCCATAGAAGCGCACATCATCCTCTTGAGGATTGACCCTTTCTACTACTTTAGCGTACAGTTTCCGCCTCTCGATGTGTAATTAATTTTGCTTAAGTAATTATCTGTAATTAAGTAGCTGGTTATAATTAAATTAAAAATGGATTTTAGGTTCGATCCCCCCTGCCCCCCTTGATAAGGGGGGTGCCGATAGGCGGGGGGATCTGACAATT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 6485-113 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOLN01000073.1 Microcystis aeruginosa NaRes975 Scaffold73_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================================== ================== 6484 37 100.0 36 ..................................... TTGATTGAAGCTTTGAAACTAGAAGAAATAGCTAGA 6411 37 100.0 35 ..................................... ATCTAAAAACTATCAATGTCTCCACTTTTAGCCCT 6339 37 100.0 36 ..................................... CGATAAAATTGCTATTATTATTCGCAGTTTATAATC 6266 37 100.0 35 ..................................... TTGATCACTTGAGCTTCGGCGGTGGTCCCGATTAG 6194 37 100.0 38 ..................................... CCTTAAAGCTTTACCAAAAATCTGTGCTGATTACCCTA 6119 37 100.0 34 ..................................... TACTTATTGTTTACACTCTCTTTATAAGCATATC 6048 37 100.0 35 ..................................... ACTAGAAAGGATTGAGGCCTTAGAAGCTAAACCAA 5976 37 100.0 37 ..................................... AAAAATCGAGCTAGGCCGCCTCAGCGAGGCACAAATG 5902 37 100.0 34 ..................................... AGCGATCGATAGATTGATTTTCAGGCGCTTGGGT 5831 37 100.0 35 ..................................... AAGCTGAAGTCGCTCTCCCAGGGATTCCCTTCTGC 5759 37 100.0 35 ..................................... CCTTGCCCAAATCGGTAAGAAATCCGGATAATTTC 5687 37 100.0 39 ..................................... AACCAGACTGGACTACGCGGCAAAATTTGGGAGAATGGC 5611 37 100.0 33 ..................................... ACTTCATGGATTATACGCAGCCATAGGGCAAAC 5541 37 100.0 36 ..................................... GAGAGTAGGATTAATTTGATAATTGAGATTATTATT 5468 37 100.0 35 ..................................... TGGAAAGATTCTTGGCCGATCAATTATTTTCCTTT 5396 37 100.0 34 ..................................... CAAAACTAAATTTAAATTAGTTTGAATATTTGCA 5325 37 100.0 41 ..................................... AGTAAAGGAGCCTCAATTGCGAGAGAAGTCCCTAAAGTCAA 5247 37 100.0 34 ..................................... CAATTATTGCCAATGTGAATATGATTTGCGATAT 5176 37 100.0 35 ..................................... ATCTTCTGTCCTTGGCGCGTCGTTAATTTCCCCTT 5104 37 100.0 37 ..................................... CGGCACAGTTTGGGCATTCGATCGATTTAAAAGAAAT 5030 37 100.0 40 ..................................... CATTGGGTAAAGGCTGCCCTAGATTAGCTAAGTTGGGATC 4953 37 100.0 34 ..................................... CATAATCCCAAGGGGATTAATCAATATCCTGGGC 4882 37 100.0 37 ..................................... AGAAGCGATCGATCTATGTGATCGCCGAAAAGATTGA 4808 37 100.0 34 ..................................... TAGGCATTCTTGAATTTCAAAACCACAGTAGTTA 4737 37 100.0 36 ..................................... CATTATAAAGAAAAACCATTGGTTCTGCCCACGGGT 4664 37 100.0 36 ..................................... TGATTTGTCCCGTAGTCTTAACAATCTCCCATATCT 4591 37 100.0 33 ..................................... ATGTTTTAATTTCCTTCTAAGTAAAGCCAAGAA 4521 37 100.0 35 ..................................... AATCATCAAAGCGCACCCCGGATAACTAGCCACCA 4449 37 100.0 36 ..................................... CCCCTTTATGGTCCGTACTTAAGTGCCTACGAAATT 4376 37 100.0 35 ..................................... TTTTGGATTAGTTGCCACTTGCAATATAGGCGGAT 4304 37 100.0 34 ..................................... AAAAGACTTCTTTGTCCCGTCGTAAAGCATCGCT 4233 37 100.0 38 ..................................... CCAAGTCACAAAGTCTCAGTCCTAGTGATTTTCTACCT 4158 37 100.0 41 ..................................... AGAATTGACAAAAGCCAAAACCTATTACATGGATCGGCGTG 4080 37 100.0 35 ..................................... TCGCATAGGGATATACAGCAATATGATCTGTGGAG 4008 37 100.0 38 ..................................... GATAATCAAATGAAAGTAAGTATAATTCTGATATTCAA 3933 37 100.0 37 ..................................... AAAAGGAATTGTGATGATTCATCTAAAATCACTAGCT 3859 37 100.0 34 ..................................... AAATAAAACCCCGGGAAGTTGCCCAAAAATTCGG 3788 37 100.0 34 ..................................... AGTAGTCCATCCATGATACCAAACGATACCAGAG 3717 37 100.0 34 ..................................... GTTTGACTGTGCCACTTTAAGCACTGGCACGATG 3646 37 100.0 39 ..................................... AAAGAATTTACGCAGTCTAGAGGCATCACAATCTATAAA 3570 37 100.0 36 ..................................... TTACAGGCGATCTGCGACAGGTATGAAGTACAGCCT 3497 37 100.0 34 ..................................... CTACACCCGCCGCAAAACAAACAAATTGTCTCCC 3426 37 100.0 36 ..................................... TGGATCAAATATCCAATTCAATAAATGGATACTTAA 3353 37 100.0 35 ..................................... TCAATGAACACGCTAGAAACAAAATTAAAAAAATT 3281 37 100.0 37 ..................................... TGTTTTAGAGAGAGGCGATCGCATAATTGCAAGTTGG 3207 37 94.6 32 .................A.....C............. ATCCAAATTAGTATCTAAATTAGTATTCAAAT 3138 37 94.6 37 .................A.....C............. AAAATTTCCCTCTCAAGTTTCAATGGATGAGTCTGAC 3064 37 94.6 34 .................A.....C............. AGAAAAGATCATGAAGCATACGTCGCTCGATACG 2993 37 94.6 34 .................A.....C............. GAGCGTTGTCACCGTTGTAAGCCGCACTGTATAA 2922 37 94.6 39 .................A.....C............. ATATAATATAATATAATATATAACCTATTGACATATACA 2846 37 94.6 52 .................A.....C............. CTCGCAATTGCACGGGCTATATGCAGCCATAGGCGCGGTTCTTGCCACAAGA 2757 37 94.6 33 .................A.....C............. ATCATGGCATCGGTGAAATATTGCCCCCCTAAT 2687 37 94.6 34 .................A.....C............. AAAAAAGATCATGAAGCATACATCGCTCGATACG 2616 37 94.6 34 .................A.....C............. CCTAAAAAAGTCACTGGTACACCCATGTTAACCC 2545 37 94.6 35 .................A.....C............. TCATCAGCCAAGTCTTGCAGGATTGCTGATACCTC 2473 37 94.6 42 .................A.....C............. AAATTAATTCTCTTAGTGCCGTTGGCAATTTTTTTTAAGCCG 2394 37 94.6 35 .................A.....C............. GGTGATGGCCGGCTCGATCAATCCTTCCGCTTTCC 2322 37 94.6 35 .................A.....C............. TCACTCTTGATAGAATAGATACTAAGAGCCGCAAT 2250 37 94.6 35 .................A.....C............. GCTCGATACGGACGTACTTGGCTAAATCATTCCCA 2178 37 94.6 34 .................A.....C............. CAAAACTAAATTTAAATTAGTTTGAATATTTGCA 2107 37 94.6 34 .................A.....C............. TTTAATAAAGTCATTTTATCAATTACCCGCGATG 2036 37 94.6 34 .................A.....C............. GAGTTAGATCGAGAGGAGTACGATCTTGACTATG 1965 37 94.6 34 .................A.....C............. TTTAGCCCATCAGGAAAGTTTAAAAACACAATTT 1894 37 94.6 35 .................A.....C............. GAATGGGCGGGCTGGAGTCCGGGCTGGTGGCTGGG 1822 37 94.6 35 .................A.....C............. AATTCTCTTAGTGCCGATGATTTTTTTTAAGCCGT 1750 37 94.6 35 .................A.....C............. ATCGGCGGCGATTACCAAATAGCAATGGCAAACTA 1678 37 94.6 35 .................A.....C............. GCGGTTACTTGACAGTTGCTGGTGGGTGGGTCCCC 1606 37 94.6 37 .................A.....C............. GAAGAAAATTAAAAAAAATCCGCAAAAAAGAAAAACT 1532 37 94.6 35 .................A.....C............. AGAAAATCTGATAGATAGCGCTTCACTGATTCTGC 1460 37 94.6 36 .................A.....C............. CGTAAGATTCGCGGAGCCACAGGAAGGAAATCCCTG 1387 37 94.6 34 .................A.....C............. CGATCGGTTGCTCGCGGCGATCGGGGCTTGCTGG 1316 37 94.6 36 .................A.....C............. TACTTATTTTAATCATGGGAATGGTGTAATTAACCC 1243 37 94.6 36 .................A.....C............. CTGGCCACGGGGGGTGCGGGGGGATCGGACTTCATC 1170 37 94.6 41 .................A.....C............. GCCAGGGTGGCCTGACTTCCTATGGCAAAAATATGATCCAG 1092 37 94.6 36 .................A.....C............. GCTGACTTGGTAATACTGAAACTTTACCTAAGAATG 1019 37 94.6 35 .................A.....C............. AAATTTTCCTTTTGAGTCAACCCCCACAGTTAAGG 947 37 94.6 34 .................A.....C............. GCAAGCTAACAACAACAACGATAAAAAAAATTCT 876 37 94.6 38 .................A.....C............. TGTCGCCCGCCCTGCCGGGGAAAAGGTACTCGTTCGGG 801 37 94.6 35 .................A.....C............. TAGCAAGTGAAGATAATTGGCGATCACGAACTCGG 729 37 94.6 37 .................A.....C............. AACATGAGCAGTAAACCACCGATTAGCTTCAGACTTT 655 37 94.6 36 .................A.....C............. CTCAATTGGGAATTCGAGGATGGTAAGGGCATTGAT 582 37 94.6 35 .................A.....C............. TACCGTTGCCGCCGTTGTAAGCCGCACTGTATAAG 510 37 94.6 35 .................A.....C............. ATCGGATAATTCTATTGGCTTAAAATCACCTAGAG 438 37 94.6 36 .................A.....C............. AGATCATTCTCACAAACACTAGCAGCAGAAAGCCCT 365 37 94.6 34 .................A.....C............. TTGCTTTCCAGTAATTTTATCGAATTCCGGCCAT 294 37 94.6 35 .................A.....C............. AGCAATCGGATGATCACAATCAGAAAAGCAAATAC 222 37 94.6 36 .................A.....C............. TCGCCCCAGGAGGAGTGCCGGGAGGAGATCGAAAAT 149 37 94.6 0 .................A.....C............. | ========== ====== ====== ====== ===================================== ==================================================== ================== 88 37 97.4 36 GTTCCAATTAATCTTAAGCCCTATTAGGGATTGAAAC # Left flank : TTTGTTGTCAGTTACGATATTTCCGACGATAAGCGACGAACCAAAATTCACAATACGTTAAAGTCCTACGGCCAACGGGTGCAGTATAGTGTTTTTGAGTGCGATCTGACCGATACCCAGTACGCTAAGCTGCGCGGGCGCTTGAGTAAGTTGATCAAACCCGATACCGATAGCATCCGCTTTTATTTCCTCTGCGCCTGTTGTCGGGGTAAAGTGGAACGTATCGGTGGTGAGTTACCCCGGGATAATACAATTTTTTTTGTTTAGCTCGGTTGCGCCTCGGAGTAGCTGTAAAAATCCTTAACTATTATCTGGTGGCTGGAAAGCTTATGCAATATGGATTCGAGATTATTTTCCTTTCCAACGTGGGGCGCACCTTATCCCGTAAGGTTTTGCGGGTTCTTGAAGAAGTGGGTCACTTGCTGTATAATTGGTTTATTGCGGGTGCGGCGCAAATGAACCTTGAAAACTCCATAGCGTATGGCTTTTACCAGTGGGCG # Right flank : CAAGGTTCAAGGGGTGACAGAGGGGCTACAAGCTAGATAGAGCGGGGGGTCTAGCCAAACGACCCCCTAAAGAAATAGAGTGGTTAGGACAACCACTCAAAATTTTAAAATGT # Questionable array : NO Score: 8.87 # Score Detail : 1:0, 2:3, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAGCCCTATTAGGGATTGAAAC # Alternate repeat : GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.30,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //