Array 1 105821-102361 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNHP010000005.1 Bifidobacterium adolescentis strain 1001095IJ_161003_A7 NODE_5_length_112598_cov_24.9921, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================================================================================================================= ================== 105820 29 100.0 32 ............................. TATGCAGCCAAACCGATGGCCGAGATCACCTC 105759 29 100.0 32 ............................. TGTAGTATGCGCGGATGTTGGTTTCGCGGCCA 105698 29 100.0 32 ............................. CGACGAAAGGATTTGATTGGAATGAATGACAG 105637 29 100.0 32 ............................. CCATGAATCTTGCCAGTTTCGATAGCGCCCGT 105576 29 100.0 32 ............................. ACACTCCATCAAACACGAAAAAAGGCGCGTTA 105515 29 100.0 32 ............................. GTGTGATTCACGGCACTCCACTGAGTTACGGT 105454 29 100.0 32 ............................. CAGTCAAACCAAGCGTACTCAAGTCAAACGAG 105393 29 96.6 33 ...............A............. TGTTAAAACCACGACGGCGGGGCTACTCGAAGG 105331 29 100.0 32 ............................. GTAGTGGGTGTGTGCCTAATTCGTTCGCTAAT 105270 29 100.0 32 ............................. GTACTTGCGTACGGTCACGTCGTCGTATCCGG 105209 29 100.0 32 ............................. AGAATCGGGACAAACACCAGAACACCAGAACA 105148 29 100.0 32 ............................. GGCGGCATGAAGGACAACCACTGGCCGGCCGA 105087 29 100.0 33 ............................. GCCCTCTACGACGGCGTGCAGGTGTGGCCGCCA 105025 29 100.0 32 ............................. TGCTTGTCGGTGCCGTCCGTGACGAGCATTTC 104964 29 100.0 32 ............................. TTGCCTATTCGAACCTTGTATTGTCGGATTCC 104903 29 100.0 32 ............................. TTGTCGAGCAGGTTGCCGTTCTGATCGAACAC 104842 29 100.0 32 ............................. ACGATCATCAGCCTGATCTACGGCGACAAGGA 104781 29 100.0 32 ............................. GGCAACGTGAGCCAGACGCAGACGCTGAAAGG 104720 29 100.0 32 ............................. CGATGCCGTCCTTGGATTCCGAACGCCCCTTT 104659 29 100.0 32 ............................. TGCAGGCCGCCGGAAAAAACGTGCAGGAGATA 104598 29 100.0 32 ............................. TCGTAGCTGACGGCCTCGCTGTGGTCGGTGTC 104537 29 100.0 32 ............................. AGAAGGAGCCCATCATGGCCACCACAGTCTAG 104476 29 100.0 32 ............................. CAGCCTCCTTGAGACAGTGGATCACCAGACTG 104415 29 100.0 32 ............................. ACCGGGTTCGACAGCAACGTCGAAACCGCTAT 104354 29 100.0 32 ............................. GACTTTGGAGACCACAGTCAATAATCTGACCA 104293 29 100.0 32 ............................. ACCGGCGCGACCAGCGCCCAATTGGACCAGCT 104232 29 100.0 32 ............................. CCGTGCGACGGCATCGAGACGCCACGCAAGAA 104171 29 100.0 32 ............................. AGCGTCAGGCAGCCGGTGTCGAAACCCTGCGC 104110 29 100.0 32 ............................. GCGAGGACATCGACTGGAAGGTCAGCGACCTG 104049 29 100.0 32 ............................. TACATCAACGTCGGCACCGACAGCGAACGGAA 103988 29 100.0 32 ............................. TTGTAGCTGATCGCCTTGACCTTGAGCGTGGT 103927 29 100.0 32 ............................. GAAGCGCGCCCGCCCTCAAGGCCGCCGCCGAC 103866 29 100.0 32 ............................. ACAGTCGGTTCAGGCGTGGCGAATGCGATTGG 103805 29 100.0 32 ............................. GTAACTTAACAACATGTTGCACATACAACAAT 103744 29 100.0 32 ............................. TCCAACGCCCTGGCCGCCATCGTATTCCTGAT 103683 29 100.0 32 ............................. TTTCCGGTCAGATCGGCCTTGGCCTGAGTCTT 103622 29 100.0 32 ............................. GTGTTCACGGCCGGTGGCGTGACCGACGGTGA 103561 29 100.0 32 ............................. GATTTGGAGGCGCGCGACCGTATCAACATCGC 103500 29 100.0 32 ............................. GCGTCAACCAGCGTATCCAAGCCCTGAACCAT 103439 29 100.0 32 ............................. TGGAAAGCGACAAGTACGCGGCCGACATGGAG 103378 29 100.0 32 ............................. AACTTCAAAATCGCGGACAAGAGCTTCACCGT 103317 29 100.0 32 ............................. ACTCGTGGACGTGTGGCTCAAACAGGTGGACT 103256 29 100.0 32 ............................. CGAGTACGAACACCGCACAGGATGTTCCGCTG 103195 29 100.0 32 ............................. CAAGGACGATTCTAAGGAGACGCATATGGCAG 103134 29 100.0 32 ............................. GCGAGAGTCCAGATATGGAACAATACGACGCA 103073 29 100.0 32 ............................. ATGCTGGCAGTCGAAGAACTCGCAAGCCAAGG 103012 29 96.6 32 ........T.................... GACCTTCGGACGGTACGTTCTGCTTGTCGAGC 102951 29 100.0 32 ............................. TGGGTGCCGGCTTCGGCTCCGATGGTGCCGTT 102890 29 100.0 32 ............................. CGACTGCCGGACATCGGTTTGATCTGGCATGA 102829 29 100.0 32 ............................. GTCTTACCGAGACCACGCGCACTGATAATGAA 102768 29 93.1 32 ...T.........G............... ACTTAAATTTGGACGTCAGGCGCCCAGATTGT 102707 29 89.7 167 ...T......T.....T............ CAACGGCACGAAACGCATATCCGCGAGCTATAGGTGCTCGACATATCGGGACTGCATCAGATCCAACTGAAATAGAAAACCCGAAGATAACCCCCCGACTGATGTTCCAGTCTTGAAAGCTGGTCGCGTGGGATCTTCGAGCAATCTAATTCTACCACCACGGCACC 102511 29 93.1 32 ...T...............A......... CACGACATGCAGGACTACCAGCCACTCGGCAG 102450 28 93.1 32 ...-.......G................. GCGCTCGAAAACAAGCTGCGCCAGCGTTTCAA T [102443] 102389 29 82.8 0 ...T.......G..............TGT | ========== ====== ====== ====== ============================= ======================================================================================================================================================================= ================== 55 29 99.0 35 GTGCTCCCCGCACATGCGGGGATGATCCC # Left flank : TTGGGCTTTGGGATGATAAGCAGGGCGAGGTTTCTGCAGGCAAGTCCTACTCGGATAATGACGAATGGGATGGTGGGACATGGTAGTGATTGTGCTGACTGCTTGTCCTGTGGGATTGCGGGGTGATCTCACTCGTTGGTTGCTTGAGATAGCCCCAGGAGTTTTTGTGGGACATATCGATGCTCGAATTCGAGATAGGTTATGGGAGAGAATCATTGATTTGCTCAGGGATGGTCGTGCCGTAATGGTTTATTCGGCCAGAAATGAGCAGCATATGGCTTTTAAGGTGTATGGGGCTGACTGGTCACCGGTCGATTGCGATGGATTGCAATTGATCAAACGTCCTAAGGAAGCAAAAGAAGGATCCTTTGTTGGCACTCCTAGAAAAGGATGGAGTAATGCGAGCAAATACCGAAAGGCAAGGAAATTTTCAAAACGAAACTGAATGAAAAACAGCCAGTTGTCCTTTCTTTTCCTTGGAATTATGCTATTTTCGAAGT # Right flank : ATTTGTCAATCTATCAGTCGCATCGCATGTGCGTTAGCTACACTTATCCGCATAAGTGTAGCTAACGTTAAAATAAGCTACATTTATCTCGATAGGTGTTGCTTACGAGAGTTTTTGCGATGGATAATTATTCAGCCATTTCGACATACAATGAATCCGTAGGGGCCACAACGACTTGTGTTTCCGATTTACAAGCGTGGCTTTGCTTAAGAACGTGATTTTGTCCGGGGAACGATGCGCTTGACACATACTGGCACTACCAACGGAGGAGCACCATGAAATACGAGATTACGATTTGCAAAAGTATGAAACGCAAGAAAGGACGCAGTCGCGCTTCGATATGTTTTTGATTGCGTAACGGCGCGACGGCATCGCTTTTGCGCATGTCGGGCGCTTCGTTGCCGCAACCGGCGTAAGATATCTGCGAATATCAAACATAAGCGAGATATCTGAAGGAGAGAAGATGTCAACAAACGAAGCAGCATTGCCGCAGTCGACGG # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.21, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACATGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGATCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //