Array 1 3941573-3938365 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP075185.1 Dechloromonas denitrificans strain 110 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3941572 28 100.0 32 ............................ CTTCGTCCGCGGAGTCGACAATGCCAAGGCCT 3941512 28 100.0 32 ............................ AAGTGGTCGGCTGCCATTGGTACGTATAGGAC 3941452 28 100.0 32 ............................ CAGCTCGCAACGTAGTCGGCCGGCCTGCACGG 3941392 28 100.0 32 ............................ AATTCGGATAAACAATGTGCGGCCCTTGCTTC 3941332 28 100.0 32 ............................ GACTTCGGCGGCGGTGTCGGATCGCCCTGCAG 3941272 28 100.0 32 ............................ CACGGCGGCTGTTGATGTGGGCAACGTCACGA 3941212 28 100.0 32 ............................ ATGTCACCGACCACGACCAGCCTCCGGATGGT 3941152 28 100.0 32 ............................ TATTGGAAAGGCAAGTACGGCGGAATCCCGGT 3941092 28 100.0 32 ............................ ATCCTCGAAACCGAGGAAAAGACCGCTTTCAC 3941032 28 100.0 32 ............................ AGGCGCTGATCGAACCTCAGGTGCGCGACGAC 3940972 28 100.0 32 ............................ AGAATGGGCAGCGCGGGCCAGAATGGGCGGCG 3940912 28 100.0 32 ............................ GATAAAAAGCAGTTCGAGCGCGATCTATTGGA 3940852 28 100.0 32 ............................ TCCAGTTATCACAGTCGTGGTCGGGCCTCCCT 3940792 28 100.0 32 ............................ AAGCACCGGAGCGCTTGGTGGGGGGTATCTCA 3940732 28 100.0 32 ............................ CAGGGGCCGGTGACGACATCAAGCAGTTTCAT 3940672 28 100.0 32 ............................ AGTGGCAATGTCATGTGCCTGCCTTCCGGTAC 3940612 28 100.0 32 ............................ GATTGAGGAATGGACAGAGTTACGGCCTGATC 3940552 28 100.0 32 ............................ GAATCAAGATCGAGATCATGCGCCAGGTCGAT 3940492 28 100.0 32 ............................ TGAAGCGCTTGCATGCTGGGAAAAGGGCGATG 3940432 28 100.0 32 ............................ GCATCGGGCGGCGTGACACCACGCACACTATC 3940372 28 100.0 32 ............................ CGGAGCGATAGCCATCGGAGCGCCACGGCGTA 3940312 28 100.0 32 ............................ AGGCCGAACGTGTCGCTGAATCCGGCGGGAAG 3940252 28 100.0 32 ............................ AATCGGAACGCCACATCGAGCGGCAGGTTACG 3940192 28 100.0 32 ............................ GTTTCGTGCTGTCCGTCGTCGTCGACGTAAAA 3940132 28 100.0 32 ............................ TGCCCCATGCCTTGCCCCACGATTTACCCCAG 3940072 28 100.0 32 ............................ TACCGCCTCGACGGGGCGCCCTACGTCGAAGA 3940012 28 96.4 32 .A.......................... AGCGTGCCGATTGTGGGCGATGCCATCAAGGC 3939952 28 100.0 32 ............................ CGAGCCGCAGCCGCCGACCAACGGCGCCATCG 3939892 28 100.0 32 ............................ TCCTTGCAAGGAGGTGAGTGATGACCAAATGG 3939832 28 100.0 32 ............................ AGATGGGCAACCAGTTCGCGCAGTCTTTAACG 3939772 28 100.0 32 ............................ GATCCAGTTGGTGTGCGGGTCGAAAACGACAG 3939712 28 100.0 32 ............................ GCCGGAAGCGAGTGGCTTACCCGGAACTATTT 3939652 28 100.0 32 ............................ TTCTTGTCGGAACCGTACTTGTTCGAGGTCTT 3939592 28 100.0 32 ............................ CATCAGGGCCTTCATCAACGGACGTTCGACAG 3939532 28 100.0 32 ............................ GTACTCAAGCCGTCGCAACTTCGCCACCTTAT 3939472 28 100.0 32 ............................ ACGATGGCCGCGCTGTTCAATGCGGCTGACGG 3939412 28 100.0 32 ............................ GATCAGCGCAACCACCAAGGAACGCAGCATTG 3939352 28 100.0 32 ............................ ACGGAATATTCGCTCGGTACGTCGGAAGTTGC 3939292 28 100.0 32 ............................ AGCGTGCCAAGCTGATTAATGCGATAGCCCGT 3939232 28 100.0 32 ............................ GTTGAGCAGGGGAATCAGCCGGACCCAGCCGG 3939172 28 100.0 32 ............................ GAGTCGCGGGTGCTGGGAACGATCCTTGCCGG 3939112 28 100.0 32 ............................ CAGTCGCCAGACACCATACACCAGTATGTAAA 3939052 28 100.0 32 ............................ TTGCTCGCGTCGGTGTCCATCCCGACCACCCG 3938992 28 100.0 32 ............................ TGCTCTGCGATGGTTGCTTGGCCCTCGGCGAG 3938932 28 100.0 32 ............................ AAGATCGATATCAACGACCGCACCCAGATCCC 3938872 28 100.0 32 ............................ CATCGCCCGGGCGGGCGGGGCAGATGGAAAGG 3938812 28 100.0 32 ............................ GATTGACCGGGCAGGACGCGGTAGCGGAAACC 3938752 28 100.0 32 ............................ GTCACGTGAATGACGGCATACTGGGCAAGATC 3938692 28 100.0 32 ............................ ATGTCAGCGGTGATTTCAACTGGCACCAGGCC 3938632 28 100.0 32 ............................ TCGTAGCCGAGCGTTCCATTGACGACGTGCGT 3938572 28 100.0 32 ............................ GGGTTGAAGATCAACAATTTTTTGGACCGCGA 3938512 28 100.0 32 ............................ TGAGTGAATGAGCCAGTCGAGAATTGGCTGAC 3938452 28 100.0 32 ............................ CGCATGATTGGGCGCAAGCGTTTGATAAGCAT 3938392 28 89.3 0 .............T........T..T.. | ========== ====== ====== ====== ============================ ================================ ================== 54 28 99.7 32 CGTCACTGCCGGACAGGCAGCTCAGAAA # Left flank : GATCTTGAGCATTTGATGTCCGCGAACTGGCTACTGGGGATGCGCGATCATCTTTCCTGTAGTCCTGTCAGTCCGGTTCCTGTGCATGCGGCATATCGAGTAGTGCGACGCGTGCAGGCCAAAAGCAGCCCGGAACGGGAGCGGCGGCGCTTGGTCGCTCGCAAGGGGATTAGCGCTGAAGCGGCAATGCAAGCCATTCCTGATAACACGGCGGAAACGCTGTGTCTTCCTTATTTGCTACTCGCTAGTCAAAGCACGCAGCAGCAATTCCGCTTGTTCGTTGAACATCTTCCTGTGCAAAAAGAAGCGGCAAATGGAAGATTTAGCGCTTATGGGCTGAGTTCTACCGGGACCGTGCCCTGGTTTTAGACCCTTTTTTAGGGGGGTGAAATATCCCCCCTGAAAATCAATGAGTTATTCGGTTGTTTGAGATTTTGGTTTTTACGGTTGGAATGGGGATATTTCTTTAAAAATTAGATTGATAGGTAGAATCCTTTGTA # Right flank : TTTGGCACCATCAGTTTTCTGTGCATCGGCCTTTGGCAACGAAGGACGTCGATTGAAACCGCGAACGCCGGGATTGCCTGCCGGGCCGAGAGGCGATGAATATTCGGCTTTATGACAGTTGCACGATTGACGCCATCTGTAGCACGATGACATTCTCTGTCTCGTGGCACCGAATACGACATCGGCAAGTGCCGGCCGGTTTTTGTGTCCCGCATCTGGCGGGGCAAGGAAGGATCAACCATGCGCGTTTCTCTTTTGGCCATCATCGTCGGCTCTCTGGCCATGCCGGTCGAGGCCGCATCGTCCGGTTACGAGCTTTATCTGCTGGCGTGCGACGGGCGTTCCGACTGCCAGCGGGTCGCCGACATCGTGCTCGGTGCGGACGGGCAGAAGTCGGAGCACGCGACGCCCGGTGTGGACGTTCGTATCGAGCATCTGTCGGCCCTCGCCGATGGCACCAATATCCGGATGAGCATGAGCCTCAACCCGCTTCAACTGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTCACTGCCGGACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //