Array 1 146962-146003 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AZYV01000015.1 Streptococcus sp. BS29a contig00003, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    146961	    36	 100.0	    30	....................................	AATCTCGGATCTAGAGTAGATTTTGGGACT	
    146895	    36	 100.0	    30	....................................	TAGGACAACCGTTCGAAATTGTTCGAAGTG	
    146829	    36	 100.0	    30	....................................	TATCTTCCTAATTCAATGGTCATTGTAGGT	
    146763	    36	 100.0	    30	....................................	TGCTTCTAGATTACTCTTTGTAGAGCAAGG	
    146697	    36	 100.0	    30	....................................	CATCACTGTTCACAATGGGCAACAGAGATT	
    146631	    36	 100.0	    29	....................................	CAATTACTAGAAAGTCTAGAACCAGATGA 	
    146566	    36	 100.0	    30	....................................	CGATGAAATGATGCCTGCAATTCAGGTAGT	
    146500	    36	 100.0	    30	....................................	CACCAATACGAAACCCTAGATTAACACCAG	
    146434	    36	 100.0	    30	....................................	TTACTGATGTTTCCGCTCTTTGTAATGCCA	
    146368	    36	 100.0	    30	....................................	ATAAATACGGGGACAGCTTTATCAAAAGTG	
    146302	    36	 100.0	    30	....................................	CTTCACTTATGGTTTTGCCTAGTGAAAAGA	
    146236	    36	 100.0	    30	....................................	TAATGAACGAATAAAGTCAAGCATTTTTCT	
    146170	    36	 100.0	    30	....................................	GAAATGGACTGAAGAACTCCAGGACAATGA	
    146104	    36	 100.0	    30	....................................	CGTTCCAAGTCATCCCACTTCCAGGGTTCG	
    146038	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        15	    36	 100.0	    30	GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC	                              	       

# Left flank :   GATGATTTTCTATCCTATAGTGATTTTGTTGAATGTTGCGAGAAAATGGAGTTTCTTACTAATCATAATAATTCATTATATATTGTTTTGTTTCCTTCCAATGAAGGTTATCTTCATGTCACGAAAGAAGTTTTAGAGGAAATCAATATTGTTTCCGATTATGTTGATCATTTTTATTCTCTAGAATTTATGTATGATCGCTTTGTCAATCAATATCCAATAAATCAAATACCTGATGAACAAGACTTTTTAACTTCTTTAAGAAAAATTGGATCCTATTTATTTAGTTCGGACATTCTTCACATGAGTTTATCTGTAGAAGATCAAGTAGCATTAAAAATTTTGAATAATTTGTATCAGTATGAAATGAAAACAAAATTTCGTAGTGAATCAGTCAATCCAATGTTATTGAAATATTTGGAAGAATAGTATTGACGAGTGGAATTTAAGAATTTATAATATTTTTGAGGGGAGCAAAAATCAAAATTGACGAATTTGAG
# Right flank :  ACCTCATGCTTGAAGATGGCCGATTGGCTGAAAAAGAAAGTTTCAACATCGAGCCTGACGGATTGATCACTACAAAATAATTTTTTAAAAATAGAAAGGAAATTTTCTAAAATATTGTTCGAATTGTAACCGCAGGCTCAGGCTTGCGGGCTTTTTTGTTTGCAATAATAAAAGCAGTGACGGAAATCACTGCTTATCAGCTGTAGCAAATTCATAAAGTTTTTCTGCTGTGAGAAGTGCCATTTTGTCCATGCTTGTTTTTCCTTTTCTGAGGTCAGAAACGGTAGTCCATGGCACACCGGCACCTTGTGAAATAGCAGATGTAGAAATAGAACTATTAAGTAATTCTTGAATAACTTTTCTCATATTTTTCTTTACCTCAATTTTTATCTTAATCATATTATATAACGGAGAACCGAGATGTCAAGCGTTTTGATAAATTATTTCTAAATATTTTCGCCCAAAACTTGCCCCCAAAAACTTATTTTTTTATATTTTTT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.20,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,4.77   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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