Array 1 124372-123496 **** Predicted by CRISPRDetect 2.4 *** >NZ_WHJL01000140.1 Limosilactobacillus fermentum strain I2 ODPJPMHE_140, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 124371 36 100.0 10 .................................... NNNNNNNNNN Deletion [124326] 124325 36 100.0 30 .................................... TCAACCTTTGCTTGCGAGCGAACCGCAATC 124259 36 100.0 30 .................................... TCCTCATCCTTCATTGCTTCAATGCGGTCA 124193 36 100.0 30 .................................... ATCGTAATCTTGCCGAAGTCGGTGTCGAAG 124127 36 100.0 30 .................................... TTAAAGGATTGATTACCCTTATTAGGTACA 124061 36 100.0 30 .................................... TCTTCCATACTGCGTTAATACTTCATCAAT 123995 36 100.0 30 .................................... CCAGTTGGATTCCAGATCAATTCCATTGCT 123929 36 100.0 30 .................................... ACCTAATAAGGGGAATCAATCCTTTAAGGT 123863 36 100.0 30 .................................... CTAAGACTAAGATCGATAAACAACGCCCCA 123797 36 100.0 31 .................................... TAACATTACCCCCGATACTTGCTTACATAAT 123730 36 100.0 30 .................................... GATTGTGAACAACAATCCACCTTGCTGTTC 123664 36 100.0 30 .................................... CACTTCCTTTATCTTTTATAAACATATTTT 123598 36 100.0 30 .................................... CATCTGATTGAAATTAAAAACTTTAAACCG 123532 36 88.9 0 ............................TT....TA | A [123500] ========== ====== ====== ====== ==================================== =============================== ================== 14 36 99.2 29 GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC # Left flank : TAATCCAACCAAGCTTGATAGTTACCAAACGGCACTTGATAAGATGATTGTTAAAAATCTTAGCATTCAGAAGCGAGATCGGATGAATGACCTCGCTCGTGGGGTGTTCTCAGAGATGCAAGATTCTTTGTTTGAATTTGATTTGCCCTTGGAAGTCAGGTATGACGAGAGTCTCTTGAGATTATACAAATATGCGAAAATTAAATATTTGACGCAAGTAATAAGGCAACCTTATGGTATAATTGAAACCGATCTAAAATTACATCTCGAATTAAAAGACTGTCAGGTTCTTGGGTATTGTAATGTCGCAAATTACTTATTGCCTGAGCAGATACAGGAATTCGCTACTCTTGTTGAGAAAACCGAATTGGCAGTTTTATTAGTAGAATTCTCAGAAAAGAGAGAAACTCTACAACAACTCAAACAGGATATTTACCGGATTGATCGGGACTTCGTGGACTGGCACGAATAGACCGTTAGTTTTTGATGATAAAACAACG # Right flank : TAGACTAAGGGCGTTGCTGTTTTTAGCAATGCCCTTTTTGAAGTGATGAGGGAAAGGAAAATGTCTTCACGTTGGTAATCTAACGGGAACTTTGGTGGGCGATGTGCTAGGATAGGGCCAAAATGATTGGAAGTGTTTGCCATGCAAATTGATCCCGAAATGATTCGCCCCGAACTGCGCCGGATCGGCAAGGTGGGGTACGCTGTTAACCTGTTGGCCAGCCCCGTACGCCTGCAACGAATGGGACGGATGATGGCGAAGGCGAAAAGGCCCATTCACTCGCGGCGGGTGATCAAACAAGACGTTTGGATTGAACGCCCTGACCACAGCAAGCTTCGGTTGGCCATTTTCCGGGCCAAACAAGTCGTGACCAAGCGCCCGGCCACCGGGATCCTCTGGTTGCACGGGGGAGGCTATGCCTTGGAAAGCGCCGAAAATACATTGGTTTATGCTGAACAATTGGTGGCAGACGGGCGGTCCGTGATGGTGGCGCCGGATTA # Questionable array : NO Score: 3.07 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //