Array 1 126652-123769 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGIKV010000005.1 Paenibacillus xylanexedens strain DSM 21292 Ga0454120_05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 126651 33 100.0 36 ................................. CTGCTGCATCAACCGTTGTGAGTCAGCATTGTTTTG 126582 33 100.0 34 ................................. CTGAGTACATCGAAATCATATTTTACCTCCTTAA 126515 33 100.0 35 ................................. GCCTGCAAATCCACAAGCGTTTTTTTTCGAAGCGC 126447 33 100.0 35 ................................. TTTTGGGCGGTATGGCGATTGGTGAAGCAATGTAT 126379 33 100.0 34 ................................. CTGTCACTGTAAGGGTATCAATCGCACGCCCTAC 126312 33 100.0 35 ................................. AAGTACTGCATACTTAACGAAATAGTCGTGCGTAA 126244 33 100.0 35 ................................. AAAAATATTTTGCTGTGGAGGACTCGCAAATAGCC 126176 33 100.0 35 ................................. CTATTAGGAGCACAATCATAAAAGAGGAGCAATAG 126108 33 100.0 35 ................................. CGCTTACCCTTCCATAGCATCTGGAAGTCAAACTT 126040 33 100.0 33 ................................. TGGTCTTAGTAATACGAGAGGTGCAACGATGGA 125974 33 100.0 35 ................................. CGTGTGTTTAACGTGCAATAGGCGCCATCCTACGC 125906 33 100.0 35 ................................. TTCTACTGTCATTTGTTTTGGTAGAAACCCAAGCA 125838 33 100.0 35 ................................. TAGCAAAGTAAATGACAGCATCTTGATATACATAA 125770 33 100.0 35 ................................. AGTTGATGCCCTGAACCTTTCGTCCTCTGAATCAT 125702 33 100.0 35 ................................. TGTCCAACATTGCACAAATACGATAGAAATCATAC 125634 33 100.0 35 ................................. ATCTCACCTGAATATTGTACAACGCCGCTTGTATT 125566 33 100.0 35 ................................. GTCAGTCTCTATTGTGTTCTTCGTAAGTTTCGATT 125498 33 100.0 35 ................................. CCAATTGATCACCTTTGGCAATATCCAAGTTAACC 125430 33 100.0 37 ................................. TCCAAAAGGAACAAGTGGAGACCCTGCATTGTTAAGT 125360 33 100.0 34 ................................. TGGATCGCTTCCACGGTAGTTAATCCCTGCGTGG 125293 33 100.0 35 ................................. CCTCTTTTTTGGGTGACATGTCTTCAATGGTGGAT 125225 33 100.0 35 ................................. TTTTAATAGTAGCAATGTATTCATCTAGGCGATAA 125157 33 100.0 34 ................................. TCTCAAGTATAATGTACCTGTAATGTCCACACTT 125090 33 100.0 36 ................................. ATCTTGATATGAGGAAAGTCTATCGGTGAGGGTTTT 125021 33 100.0 34 ................................. GATATCAGTCTTTGTGTCCACTTCGTATTGGACG 124954 33 100.0 36 ................................. AGAATCTGCAATTCGACACTGAGTATACCGTCACGA 124885 33 100.0 34 ................................. ATACACTATTTTGGAGCGTCAGGTGAAGGAGTAT 124818 33 100.0 35 ................................. AGATAATCAGGCAAGGCCTCCTCCTAGAGTGTGAT 124750 33 100.0 36 ................................. CTCCAGTGCCGCAACCAAGAATGCCGGGTCAGACAG 124681 33 100.0 33 ................................. ATTTGATGCCGAACCTCCCAGGCAGCGCGATGA 124615 33 100.0 34 ................................. TCCATGGAGGTCAGCGTCGCATCGTTACCTCCGA 124548 33 100.0 33 ................................. TCGGCTGTGTTATCAGACTGTCCCATGGAGCTA 124482 33 100.0 35 ................................. AGGAGGTTAATTTTTAATGACATTTACAGATCCTA 124414 33 100.0 35 ................................. CCATTCAATATTTTCCATGGGTTGACCCCTCCGTG 124346 33 100.0 35 ................................. AGATTGATGTCTGGCACAACTCGAATACGTCTAAA 124278 33 100.0 33 ................................. AAAGGTACATACGATCAATTTGTTAAAGGTGCT 124212 33 100.0 35 ................................. TTCGGTATAGTCAGTAGATGTATTCTCACGGTCGA 124144 33 97.0 33 ............................T.... CATGAGATCCCTGCCCAATATGCACTCTCTAGG 124078 33 100.0 36 ................................. AGAACTGCCCGACCAAACACTACCATACTCTCGCAA 124009 33 100.0 35 ................................. ATCCACGTTGCCGTCACGTACTGACTCCGGTCCGC 123941 33 100.0 39 ................................. GAACTCGGCAAGGAGATACGCTTTTACGTAGACGGTAAA 123869 33 93.9 35 ..T...............C.............. CAATTGGATACGGTTGTTTGTAATACGATCAGTAA 123801 33 97.0 0 ........................A........ | ========== ====== ====== ====== ================================= ======================================= ================== 43 33 99.7 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : GAAGTAGGTGTGATGATTGCTTATTTTGATTACGTATGATGTAAGCACGATAGATAGTGAAGGCCGTAGAAGACTATCTAAAGTGGCGAAAAAGTGTGTGGATCACGGTCAGCGAGTACAAAACTCGGTGTTTGAATGTATACTGGATGCTGCCCAATTTAGACGATTAAGATTCGAACTGGAAGAATTAATTGATAAGGATACAGATAGTCTTCGATTCTATAACTTAGGTGATAATTACAAAAGTAAAGTTCAACATGTGGGTGCCAAAGATTCCTATGATATGGGTGATCCGTTAATACTTTAGCAGGTGCGAATGCCAAGCTCACATGATTTCCCTGGGGGATTCGCACCTCGGAATTTGTCGAAAAGGTCTTTATTGTGACCTTTTGGCAATGATTTATGATCGGAAATTTGTGATAACCGTTTTAAAGAAGTAGAACTATCGAAAATACGTTAATAGTTATTCTTCAAGCATAGTTATTACGTCACTTTTCGCT # Right flank : TGGGTAAGAGGTAGAGCACTGCTTCGTTATCTAACTGTGCTCCTAATACCACTAATGAATTCACACGATGAGGTATACCCAAAAGCGAAGAATGAGACAGGGATTTTTTTATGTGTACCCCTTCACTTTTTAACTCGGCTTTGGTGAAGAGACCAAGAGGATTATATATGCACCAAAAATGAAGCTTCATTAAAAAAACACCAGGGCTTCGAGTTAAATCACTCATAAGCCCTGGTGTTTTTACGGTATCCTATTGCTTCTATTCTGCGCGTACTTTAAAGAATGAGATCAGTTCTTGAAGTTGCTCGGATACAACCGAGAGTTCATCGGAGGCACTCACAATGGCAGCCATGGAGGCTTCCTGCTCATCAATTGACTGCTCAATTTGTTTACTGCTGCTTGCTGCCTTGCTGACATTGGCAGACAGTTCATCGGCTGTGGCAGACATTTCTTGTGTGCTTGCTGAGATCTCTTCAGTAGAACTGGAGATATCCTGAATC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 2 140999-138193 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGIKV010000005.1 Paenibacillus xylanexedens strain DSM 21292 Ga0454120_05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 140998 33 100.0 35 ................................. ACGTTAACGATCTTGCATAGATCAGCGTATCCTTG 140930 33 100.0 33 ................................. ATTAGACTGCTTTAGTAACAACTGCAAAAATCG 140864 33 100.0 35 ................................. TCTGATAGGCGCTTCAGGTGCTTTCTGCTGATCTC 140796 33 100.0 36 ................................. CCATGACTCAATCTCATTAGTGTGCATCAACAACAA 140727 33 100.0 35 ................................. CATCGGGCAAGGTACGAATGTCCAAGTCACAGATC 140659 33 100.0 35 ................................. TTATTTTACGGTTACGCATGATTATTTTGTTAAGT 140591 33 100.0 35 ................................. CAGTAGATGTTGTAAAAGAAAATGATTATCCCCAA 140523 33 100.0 35 ................................. ATCAACAGCCTAATGCCTTTAACGCCCAAAAAATA 140455 33 100.0 34 ................................. TGTTAACAATTTACTCCTGCAGGAGATCCGGATC 140388 33 100.0 35 ................................. AGGCTACCAAGCTTGAGTTTCGCCTGCAAATCCAC 140320 33 100.0 33 ................................. TAGCAATCGCTAATTTTGTATTTTTTTATCGCA 140254 33 100.0 35 ................................. TCCTAATGACATCCCCAAGATCAGGACACCTGGTA 140186 33 100.0 34 ................................. TTTTCTCATGAATCTTTTACATATAGGACAACGT 140119 33 100.0 35 ................................. CCGTAGGTGTAGACAAAAAAGCAAATATCTCTTTA 140051 33 100.0 34 ................................. ATCAAACAACCAACTAATAACAGGATGGGACTTC 139984 33 100.0 35 ................................. ATCAAACAACCAACTAATAACAGGATGGGACTTAC 139916 33 100.0 34 ................................. AATTATTGAAATTTACCCCATGAACCAATTGGAT 139849 33 100.0 34 ................................. CTAATAAATGTACAGCGACGTTAATAACCATAAC 139782 33 100.0 35 ................................. AATCTATGTTCAATAGAACCACCACCAACTCGCAA 139714 33 100.0 31 ................................. AATTTCAAGCGTGAGCTCTTCTAGGTTAAAA 139650 33 100.0 35 ................................. CGCTTGATCCACTCCAGACCCAACTGTGTACCATG 139582 33 100.0 33 ................................. CCTGAAAGAACATGCAGTGAAAGGTATCGCTCC 139516 33 100.0 36 ................................. ACCTTGAACTCCTTACATTAAATCAATTTTGTTTCA 139447 33 97.0 34 ..........A...................... TGTTTTTGGATCAATGTATTGCGACTGTAGTGTG 139380 33 100.0 35 ................................. GCTTAGTATTTCGGTCGTCTCGGAGTCCTTCGGCC 139312 33 100.0 34 ................................. AGCTCATCACGTTTGAGATTCGTTTTGTTTCTCA 139245 33 100.0 35 ................................. TTTGTTGTTGGTGGAGGTGCCAAGCTGCTGAAGCC 139177 33 100.0 36 ................................. CAGTTGTAAAAACGATCGCTGAAGAAATCACAATTG 139108 33 100.0 35 ................................. GAGAATCTACGAAATTCGTTCCGTGGGATTTTGCT 139040 33 100.0 34 ................................. AGCTTGCCGTACTTCTTGGCCAACCACGATTGGT 138973 33 100.0 35 ................................. GCTGTGTCATGCGGACCGCACCCATGGGAGAAATG 138905 33 100.0 35 ................................. TCTGCACACCTGGGAAGCGAGCTGAACGGCATTGG 138837 33 100.0 35 ................................. ACAAGCGCCTGTACGCCCTGCATAATCAAATTCAA 138769 33 100.0 36 ................................. ACGACGGATATCGTAATGAGCGTTGCGCCTACGCAA 138700 33 97.0 35 ...................A............. CCATGGCTCTATCTCGTTACTGTGCATCAATAGCA 138632 33 97.0 36 ...................A............. CTGTATCAAACTATTGAGAGTGCGTTACGTAAGAAG 138563 33 97.0 35 ........................A........ CTCGCCATGTACAACGGCCTGCATAGGCTGTCCAG 138495 33 100.0 35 ................................. TGTTTAACCTGGAGAAAGACGTTAATTTTATTGAG 138427 33 100.0 35 ................................. TATATACCTATGCGTCCATTTAAGCATGAAATGTC 138359 33 100.0 35 ................................. CTTTAATGACAGGTCCGACAAAACCAATTTTTGAA 138291 33 100.0 33 ................................. GTATTTGAAGTTATGATGATTGAGAGCAGCGAT 138225 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 42 33 99.7 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : ACAGTTCTTCTTTATTATCGAAAAAAGTATAGATCGTTCCCTTGCCCACATTGGCAAGTCTCGCAACCTGCTCCATCGTTGTGGCCTTGTAGCCAAACAGGGCAAAGGATTTCTCGGCAGAATCCATCACCTGTTGCCTTCGATCTATCGTTTTCATCGCATATACACCTCCTTGTAGGTTGAAAGGATAATGGGTAAGGTAAACCCTATTTTTTGACCAATTTACTATTATGGTCAGTTGGTCGTTAACAACTGTAGCACTTGAGCAGGGAAGGTGGATGTGATCTTTGTCATAAACGGATAGGACAGGTGCGAATGTGATGCTCACATGAAAACCCTGGGGGATTCGCACCTCAGAATTTGTCGAAATGGGCAAAATTGTTACCTTAAGGCAACATGTAGGCATAATTTGATTGAATAATGATATGGAAAGTCATAGAATAATAGTGAAAATACGTGTTTTTGATGGGTCAAATCGTTAAAATACGTACTTTTTCGCT # Right flank : ACCTTTCGGATCAGCCTACGGAGAGTTGGAAGTGGTCACTCCGTATGGAATGCAAATCGAATCCCTAAAAAAGTCTTACCTTTCTTATGCTAAGCGTGAATAAGTGGGTAAGACTTTTTCATTTCAGAGAATTAAAATAATAAATATAGATGATAATTCCGAAAACTGAAATATCGTATTAAATGCACCTTATTTAAGATGTTTTGTTAAACAATAGATTTGATCTATGGTATAAAAAACAATATAATGTTATTAATTGTAAAATAAGGAGGGAGGGTATGTCGAGGTATAATGATGGATATGGATTAGACTCGACTGTGACACTACTCAGAATGGCTTATAGCTTGAATAATTGGAGCGAAATGATTAGACTAGGCGAAATGTTATATGAGGAGTCCATTAGAATTTACAATTTAAATATGTTAGTTGGAGACACACACATCGTAGAAATACATACAGATCGTGTGCCTATTTATTATATAGGTTATGCTCTGTTGATG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : NA //