Array 1 47359-47586 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDI010000021.1 Clostridioides sp. ZZV13-5731 ZZV13-5731_216, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 47359 29 100.0 37 ............................. TTTGTACCTAGGTGTTAGTATAGCTTTTTGACACCAT 47425 29 100.0 37 ............................. AATTGTGATGGAGAACAACTTCAGAGTGTTATAAAAA 47491 29 100.0 38 ............................. AGGATATAATTTTTTATCATCAATAAATTCCTTTTATC 47558 29 79.3 0 G...................A.AAC.G.. | ========== ====== ====== ====== ============================= ====================================== ================== 4 29 94.8 38 CTTTTATATTAACTAAGTGGTATGTAAAG # Left flank : TAAATAAACAAGATAATATTATCGAAATTTTTACTAACGAAAACTCTTATTGTATATATCTAAAAGCTTTAAGCATTGAAAGTGAAGAATATCTAATAAGTAGACTAAAATCATTTTTTTGATTGTATATATTTTATAAGTAGAAAACAGAGTAGTTAAAACTACTCTGTTTTTGCAATTAAAATTTAAAAATGCATTATAGCTAAAGTGTATATATACGTTATAAAATAACTTATAAATAAAATTATTGATAATGTTTTAAAAAGTTGTTTTCTATATCTAATTTAATTATCAAACTGAGATTCTTATTAGATAAATTATGTTATAATAAATGTATAAATATGCAGTGTTCGATATTTTGAAAATAAAAACTGTAATGCTTGTAAACACTGCGTTACAAGGTGTTTTTGGAAAATATCAAAAAGCACTACTTGTGGCTCACTGCAAATTTATATATTTTCTATATCTTAAAGTATTGAAAATGCTCAATTTATTTTGGC # Right flank : GTGGTTTTAAACTACTCTGTTTTTATATAAAGTAAAAATAGAAATATAAATTAAGAAAGAAGTGTACATATAATTTATAAAATAAATTAAATAATAACTTTTATAAAATGTATATATAAATTTAAATAATTTTGGTTCTCTATACTCAGTTTATTTAATAAACGAAAATTTTTATTAGATAAATTATGTTATAATAAATATATAAATATGCAGTGTGCAATATTTTAAAAATAAACACTGTAATGCTTGTAAATACTGAGTTACAAGGCGCTTTTGGAAAATATCAAAAAACACTACCTTGCGCTCACTGCAAATTTTAATATTTTCTATATCTTAAAGTATTGAAAATGCCCAATTTATTTCGGAGTTTTATATTAACTAAGTGGTATGTAAATAGTTCATCACGTAATATTTTCAAAGTGGTTTTTTCTGTTTTATATTAACTAAGTGGCAAGCAGAGTAATTTTTAATTGCTCTGTTTTTTATTTACAAATTTAAGA # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTATATTAACTAAGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 19048-21172 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDI010000031.1 Clostridioides sp. ZZV13-5731 ZZV13-5731_226, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 19048 29 100.0 36 ............................. TTGAAGCATGTCTACATTTGATACTTCAAGAATTAC 19113 29 100.0 36 ............................. AACACAAATCATCTTGAAGATGCTAAAGAATTTTAC 19178 29 100.0 36 ............................. ACTTTTTTATTATTATTTATAACTTATATGAGCTTC 19243 29 100.0 35 ............................. AAAGAAGTACAAAAGAAGCTTGAAACAATGTACAA 19307 29 100.0 37 ............................. TTTCAAAAGAGAATAAAAAAAGCTCATGAGTTCTTTC 19373 29 100.0 37 ............................. AAAACTTCTAATCTGAACTAAAATGCGAGGAGTATTA 19439 29 100.0 36 ............................. ATATTCTCTTGATGATATAATGACATCAAGTGTAGA 19504 29 100.0 37 ............................. TAGGTTAATTAAGCGATGTGTAGTTCACCAGAAGAAG 19570 29 100.0 36 ............................. AAAGTTGAGAAATGGGAAAGATTTTTAAATAATGAA 19635 29 100.0 36 ............................. TTCTAAAAGTAATTCATGAGAACCTAATTCTATATC 19700 29 100.0 37 ............................. TTTATTTCAAAAGTCAAGAACAAATACAACTTTTTAG 19766 29 100.0 37 ............................. TTTTATAATCATTCATTTTTTTCCCATCTAGTAATAG 19832 29 100.0 37 ............................. TCTAGGTAAAAATCATAAGCCATTTATATCCCTCCTC 19898 29 100.0 36 ............................. GATACGGAAGAATGTTTATATGTTGGGAAAACAGAA 19963 29 100.0 38 ............................. CAATTATTGGGGGCATGATTTTGCTACTGAGATAACTA 20030 29 100.0 36 ............................. CTGTCTTTATCAAAGTATGCTAAATTTAACTCCTCC 20095 29 100.0 36 ............................. AAGTAATGATACCATTCAATTTCAATTTTATGAAAA 20160 29 100.0 38 ............................. TATCTTTTTCTTCTATCTCTCTGCTTTTCTTTTCTATT 20227 29 100.0 37 ............................. ATGATATGGTTCTCTAATATATGTTTGTCCATATAAC 20293 29 100.0 36 ............................. GTACTTTTGTCTTGTTGAACATTATTTTTAGTTTCA 20358 29 100.0 36 ............................. TTAGAATAAAAACTATCATATCTTTTAATGTATATC 20423 29 100.0 36 ............................. ATTGTAGTTGAAGAACAAGTTTGTGGTTATATATGT 20488 29 100.0 37 ............................. GAAGTAAAAGTAAAAAATGCAGATAAAAGTAAAAAAG 20554 29 100.0 37 ............................. TATTAAAACTACATTTACTATCTTATAAAATATTTTC 20620 29 100.0 36 ............................. GTCTATAAAACGATAATAAACTATAATCATAAAAAT 20685 29 100.0 37 ............................. TCTTGTAACACTTTAACACTAGCGTCAGGTTCATTAA 20751 29 100.0 37 ............................. CCAAAATTTTTAGTTACTTCTTTTACTAATATATTTA 20817 29 100.0 36 ............................. GTCTGTAGCATTTAATGAAACAACTTCTTTTATTGT 20882 29 100.0 37 ............................. TCTTTTAACATACTTAATTCTTTTTCTAATGCTTCTA 20948 29 100.0 37 ............................. TCATTTAAATTATTAGTTGATGAAATATTTGCGCTAG 21014 29 96.6 35 .......................A..... GCAAGAGGTAAATTAAAATTAGGACTTTTAGAAGG 21078 29 96.6 37 ....................G........ AAGAGTTCTTTTTTCTGAATAATTCATATTATAATAA 21144 29 79.3 0 ...C............A.AA...C....T | ========== ====== ====== ====== ============================= ====================================== ================== 33 29 99.2 37 GTTTTATATTAACTAAGTGGTATGTAAAG # Left flank : ATTTTATCAATGATGAAAAGTATAAAGTCTTAAAGGCATGGTGGTAAAGAATGTTTGTTATTGTTACTTATGATGTTGTTGAAGCAAGGTCATTAAATCGGATTAGAAAAATACTTAGAAAATATTTGACTTGGACTCAGAATTCTGTTTTTGAAGGAGATATTACCGATGGAAAGTTACATAAATGTATTTCTGAAATAGAAAATATTATTGATAATAGTGAAGATTCAATCTATGTTTATGAGATAAAAAATCCTAATTCAATTAAAAAGAAATGTTATGGTATTGATAAGTATTCTGATGAAATGTTTATATAGGTTTGCAGTGAGCGATATTTATGCTAAAATAGGTGTTAACAGTTGGAATATAAGGGATTGAAGGCATGTGATAACTATTATCAATTGCACTACTGATCGCTCACTGCAATTTTTAATATTTTTATTGAATTATAACTGCTTGAGTGTAGTATTTTCAATGTATTCAATTAGACATATTTTGGG # Right flank : TAAAACATAAATATTCTATAAATCTTGATAAGAAAGTAGTAAAAAATGAGGTGAAATAAAATTTATGATAAGAAAATCAAATAACAAAGATATAGAAAAAATAATGGAAATCTGGGAAGAAAGTACAATCAAAGCACATGATTTTATAAATAAAGATTATTGGAAAAATAGCTACAATACTGTTAAAAACGAATATATGCCTATATCTGAAACTTTTGTATATGATGATGGAGAAGAAATAAAAGGATTTATAAGTATTATAGATAATGAATTTATAGGAGCTTTGTTTATAAGTACAAATTATCAAAGTCTAGGAATAGGAAGCAAACTTTTAGATTATGCAATTAAAGAGTATAAAAATCTAAGCTTAGCAGTATATAAAGATAATAAAAAAGCAGTTGTATTTTACAATAAAAAAGGTTTTAATATAGTAAAAGAACAAGTAAATGAAGATTCAGGATTTAAAGAATATCTAATGGAATATAGTAAACAGCTTTAGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTAAGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 12247-12537 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDI010000036.1 Clostridioides sp. ZZV13-5731 ZZV13-5731_231, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 12247 29 100.0 37 ............................. TATACAAATGAGGCTATTACAAGTGTTACAAATGCAA 12313 29 100.0 36 ............................. AAAGAAGTTGTTACAACTTTAAAAAATAATGGTACT 12378 29 100.0 37 ............................. AACGCTTTGTATTACACTTTTTATACCTTCCCATATC 12444 29 100.0 36 ............................. TAGAGGTACATCAGATAGTATGGCAGTGTTATTCGA 12509 29 86.2 0 .....................C.AA...T | ========== ====== ====== ====== ============================= ===================================== ================== 5 29 97.2 37 GTATTATATTAACTATGTGGTATGTAAAG # Left flank : GGAGGTACAAAGTCACTAGAAAACTTTCATCAAGAGTCCACAGATATTGAGGATTCTAAATCAAGTGATAATGTACAACAAGATGCCTAGTGAGATATTAAGAATTAAAGATGAATATACTTCTTTTTGTTTCGATGAAGCTTGTATGTTTTTAGTAGATGCTATAAAAAATGATAAAAAGCTTAAATTTGAAAAGAATGAAAAGAAAACTATAGCTAAAAATGAGAGAAAAACTTTTGTCCAAATAGCATTAGAGAAAAAGAAAAAAGTTAATAGGTAAAATATTCTAAATGAATAGAGTGAATTAATGTTAATTTATGATATAATGATAATATAGATATTTTGCAGTGTACGATTTTTTATATAAATTGGATGTAATCATTGAAAGTACTATGATATAAGCATATTTTGTGATATATCAAAAACACTACTGGTGACTCACTGCAATTTTAATATTGTTTTATATGTGTAAGGATTGAAAATGCTCAATTTATTTTGGG # Right flank : TTGAATAAACGCACAAAACACCTATTTAAACATATAGGTGTTTTTAGTGTGTTTAAAATATTTTTAAATAATTGGATAAATTTGCTAAATCAATAGACTAAATTATTAATTTTAGATAGAATTATATTTGAATAAATAATTTAATGAGGGAGATTATATTATGAAATTAACTAGAAAAATATTAGCTTTGACTATGATAGTATGTTTTTCTGTAATGATGTTTGTGACAGGATGTACTAGTGCACCAGCATCTAAAATGGAGGAAGTTGGTCAAGAAATACCAAAAGAAGAGGAAGAAGTACCAGAAGAAAGCATAGATAAAGATAAATTAAATCCAGATGAGTTTTTGGATTGTCAAATTAAAGAGTTTAAAGATGGTTGGCATGCATTAGCATATGTAGAAAAAAGTGTAAATAATGGTGAAATGCCCGAAAAAGGATTAAAAACAGTTGCTGATTTGTATGAAAAGCAGTTTAGTACTTTTAATGAAGAAATTGAAA # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTATATTAACTATGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 7172-6544 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDI010000004.1 Clostridioides sp. ZZV13-5731 ZZV13-5731_199, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 7171 29 100.0 37 ............................. AAAAATTTAAAAGTCTAAATACATCCTCTATATCTTT 7105 29 100.0 38 ............................. GTTATAGCAGAAATGGTAATTGGTCTAGATGAGTCTGG 7038 29 100.0 39 ............................. TTTAGAATATTTTCATTATCTATATCATTTAATTCAAAG 6970 29 100.0 37 ............................. AGAAATTAAAAAAAGATAAAGTAATCTAGTTTAATTA 6904 29 100.0 37 ............................. TTTATCAAATCATTAGATAAAAATAATTTGGAGGAGG 6838 29 96.6 38 A............................ AAATACTTAATTTAAAGCAAGTACCATGTTTAGTGCTA 6771 29 100.0 37 ............................. TGTTTGGATGCAGAAAACATACTTGATTATGTTCAAG 6705 29 100.0 37 ............................. TTTTTAGTAGGATGTTTAAATTGGTGGTGGTCACCAA 6639 29 96.6 37 ............................T GTAAATTTATTTGCTAGAAAGTCACAACTTAATTTCG 6573 29 86.2 0 ...............A......AT.T... | G [6552] ========== ====== ====== ====== ============================= ======================================= ================== 10 29 97.9 38 GTTTTATATTAACTATGTGGTATGTAAAG # Left flank : CTTACCTTTAAATATACTAATAATAAGATTAAATATAATAAATCCAACCGTTGAGCCCAAAGCACTAACAGGTACTGATGATATATTAGAGAAATTATTCAATGCTGATAGACATAACATTACTATAGAAACTATAACTAAATAAGATATGACTGTAAAAAATGGAATTGAAATACTTATATTTAACTCTGCTTCATATTCTTTCATAATATAATTCCTTTCAAATTAATTTTATTTAACTTTATTATAGCATTTAAACATAATTAAATGTAAAAATACAGTCAGAAATTAACTAAAAATATCAATTATATGTTATGATATAATAAAAATATAAATAGTTTTGCAGTGCGCGGTATTTTTGATAAAGTGTGGCTTAACAGTTGAAATATAAGGCATTGAGAACATATGATAAGTGTTATCAATTGCACTACTCATGGTTCACTGCAAATTTGAGAGAGTTGTATATATGTAAGTATTGAAAATACTTAGTTTATTTTGGG # Right flank : AAGTTACAATGAGTAGAAGAAGATTTCTATTTATTGTAACTTTTTTATTGCAAATTTAAAATTATAATATATTATAAAAATCATTATAAAAAGATGATTTAATAAAAAAATATAATTAAAAACTTGATTAATAATATATTAAATTGTAAGAAATATCCAACTGTCTACAAAATCTGAGTTTTTTATTACAATTACGAGTTTTTTATTGCATTTGAAAAATAAAAGTATTATTATAAAGGTAAGATAATTATCAAAGACAATTCTGAATAATCTAAAAACATTTCTAGAAATGAAAGGGTATAATTACATAAGTTTTATTAAAATTTATTGGGAGTTTTTAACTAAAAATAAGAACGTAAGTTCTTGTAACAGGGGGATAGTAATATGGAAAATGAAAAAGACAAACTCATCTTATCTTTAATTGAGTTGAAAATAAAGGATGAAGAAGATTATGAACTCTTTGCAAAAATGATTAAAGAAATTTATGAAAAAAATATAAG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 5440-6775 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDI010000043.1 Clostridioides sp. ZZV13-5731 ZZV13-5731_238, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 5440 29 100.0 36 ............................. TTTAATTTCTTATTATGTATCTCTATACCTTCTGCA 5505 29 100.0 37 ............................. AGACTCAGAAACAATATCTCCATAAAAATATAACTCA 5571 29 100.0 37 ............................. GATAAAAGATTCGACAGACCTTTAGACTTAGATACTT 5637 29 100.0 38 ............................. AATTTTTACATAATTAAATTATAAAGAAGTCATGACTA 5704 29 100.0 36 ............................. AATGTAAACAAACTTTATCTTTGGACTGAAAGAGGA 5769 29 100.0 35 ............................. TTTAAGGGAAACATTTAGAGGAGGAACTAAAATGA 5833 29 100.0 36 ............................. ATAGAACCCCATCTGTCAAAACCTATCTCTTGAGTT 5898 29 100.0 36 ............................. TATCTACGTCTAAGTCTCTTATTAATGTGTGACCGA 5963 29 93.1 37 ...............A............T ATACGACTCACTATTTGTGCAGTATCTAAGTAAGATG 6029 29 100.0 36 ............................. AACATCATCAAAAGCATTGCGGATTATCTTGATGTC 6094 29 93.1 36 ...............A............T TAAAAAAATCCATTACGAAAAAACTTATTAAAAAGT 6159 29 96.6 36 ............................T TTGGTGAAGCTGTCTTGCCTCTTTTAAACGAATTTG 6224 29 96.6 36 ............................T ATTAGTAAAATTACTATTACAACAACTACTATGTTA 6289 29 96.6 36 ............................T ATAAGAGTAGTTTTAAGAGTAGTTTAAAAAAATAAT 6354 29 100.0 37 ............................. TACACTAATACCCCAAGACATTATTTTCCCTAATGCA 6420 29 100.0 36 ............................. TATCCAGATCCACCATTATAACATGCAAAGGAACGT 6485 29 96.6 37 A............................ AGAGAAGGACTTTAGAAAATTGCATAATACAGGTGAA 6551 29 86.2 37 ......G.........A...A.......T TGTGATTGGTCTGTAAAGAAAGTTACAAGATTGTTAG 6617 29 86.2 37 ......G.........A...A.......T AAAGGCAGTAGAATAACTATAAGATTGGATGAAGAAT 6683 29 93.1 37 ...............A............T TAAAACATTCTTTGCTAGTTCTAAGTCATTGTCTGTT 6749 27 82.8 0 .............A......-.-.A...A | ========== ====== ====== ====== ============================= ====================================== ================== 21 29 96.2 36 GTTTTATATTAACTATGTGGTATGTAAAG # Left flank : ATGTAGTTTATAAAATTGAGTAAATTCTATTGTATTAAATAATTTAGTTTAGTTTATTTTAGTTTTGAGGGGGATTAATACAATGATTGAAGATTTACTTAATGAATATAATATAAAGGATGATAAAGAGAGAGAAAAGTTTATAAAGTTTGCTAATTTACTATATGAACTACAAAAGAATAATAAAGAAAAGTTTCAAGAATTAACTAATATAATAAATAAACTTTATGAGAAAAAATTAGAGAAAAATAATGATTAAATAGACATATAAAGCACTTGAATATTTCACTGTTTCAAGTGCTTTATGTAGTAAAAAATGATATAATATAGGTAAGAGTTTTGCAGTGTTCGATTTTTCTACTCAAGTATAGTTTAACAATTGGAATACAAGGCATTGAGAAGGTTTGATAAGTGTTATCAATTGCACTATTGGTCGCTCACTGCAAATTTAAGAAAGTTATATATGTGTAAGTGTTGGAAATACTCAATTTATTTTGAGG # Right flank : ACTAAATAAACAAAGAAGCACTTACTTAAATAGTAGGTGCTTTTGTTATTCTTTGCTAGATAAAGTAACAAGTTCGTTAGGTGTACATTCAAGAACAAGACAAAGCTTTTCGAATAAATCTAATTTTATAGAACTTGTTTCATTGTTAGCTAATTTCATCATGTTAGGATAAGCTATACCTACTTCTTTAGCTAACCAATATCTAGTTTTGCCTCTTGATTCAAGCAATTTATCAATATTAAAATACATTTTTTCACCTCTTAAATATATTATACATTGATTATATAATGTTTGCAATATATAATATGCAAATAATATAATTATATAATGTTGACATTATATAGTGTGTACGATATAATATACTTAAGGAATAAAAAATAAGAGCCACTCGCCCCTACCAAGTTTGAGTAACTCTTATTGACATATACTACATATGCATTAATTATAGTATATGCCATTCCTTAAAAAAAATCAATTAAGGAGTGTGTTTTTATGAACAA # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 8497-8915 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDI010000043.1 Clostridioides sp. ZZV13-5731 ZZV13-5731_238, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 8497 29 100.0 36 ............................. TGACACATATTGCTAGCAATTCTGATGCTTCAGAAC 8562 29 96.6 35 ................C............ TTACAATATTCCAAGCTGCTGCGAATACATCATAG 8626 29 100.0 37 ............................. AGAAAATAGAAAGCTCCCACAATTACTCCAGTTGCAG 8692 29 96.6 36 ............................G GCTGGAATTAATGCGACTACAGTAGAAGAAAAGAAA 8757 29 89.7 36 A..............A............G GTTCTAAAAACATTTGCTATTCCAACTACACAAATA 8822 29 89.7 37 A............A..............G CGTATTGCTATGTTTGCTCCATCTATGAATGCTTTCC 8888 28 86.2 0 A...................-..T....A | ========== ====== ====== ====== ============================= ===================================== ================== 7 29 94.1 36 GTTTTATATTAACTATGTGGTATGTAAAT # Left flank : CAATCAAAGGAGACAAGAAAAACTACTATATATTGTATAAAAATAATTAGATTTTAGTTTAGTTTTGAGGGGGATTAATACAATGCGTGAAAGTTTACTTAATGAATATAATTTAAAAACTGATGAAGATGTAGAATACTTTGTGAAGTTTGCTAATGCGTTATATGAACTAAAACAGAATAGTGAAGAAAAATTTCAAGAATATGTAGAGATATTGAGAGAAATACTTAGAGAGCAAGAAGAGAGAGAAAATAAGTAAAATAATATAGATAAAGCACTTGGATATTTCACTGTTTCAAGTGCTTTATTTGGTATAAAATGGTATAATAGAGATAAAAGTTTTGCAGTGTTTGATTTTTATGTTTAAGTATGGTTTAACAATTGGAACACAAGGTATTGAGAGTATACGATAAGTGTTATCAATTGCACTATTAGCCGCTCACTGCAAATTTAAGAGAGTTGTATATGTGTAAGTATTGAAAATGCTAAGTTTATTTTGG # Right flank : ATTAAAAATAATAAAAAACACTTACTTGAATAGTAGGTGTTTTTTAATTGAAAGGATGTGATTATAATGTAAAAATTTTACTTATATAGTATAATATTGCTATAAATTCATTATAATAAAGGGGGATATTATGGGATTATTTAGTGGAAATGAAAGTTGCTGTATATGTGGAGAAAAAGGTAAACAAAAAATATCTGATGGTGTAATATGTTCTGAATGTTTAAAAAAATATAAAGATACATTTTCTATAGTTGAACCAACAGATGTAATTAAAAAAATATCTTCTGAGGAAATAAAAAAATCAATAAGATTAACACTCGAAAATAAAAAACAATTTGAATCTTTTAATGCAAGTAAAAAAGTAGGAATTTATTTATTAGTAGATGAAAATAAAAAACAATTAATTATGTCTGATAAAATAAGCAATTTAAATAAGAATAAGAGAGTATATGACTTTAGGGATATTATTTCATTTGAACTTTTAGAAGATGATGAATCTA # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:81.48%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //