Array 1 32763-32555 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWJ01000040.1 Vibrio sp. V32_P6A28T40 scaffold36_size32762, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 32762 28 100.0 32 ............................ TGATGCGCAGATTTATCCAATCAACGAGGTGG 32702 28 100.0 32 ............................ GATAAAAAGCATGTTTGACTTCGGTGTTTCAG 32642 28 100.0 32 ............................ AACTATAGTTGCTGCGTTAGCCATATATCCCT 32582 28 96.4 0 ..........................C. | ========== ====== ====== ====== ============================ ================================ ================== 4 28 99.1 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : | # Right flank : TTGCAGTTGATTGGGCTTGGTTGGATCAATAAAAACAAACTTTTATTGTATTGAAAGCCGTCATTGACTGAACCCAAAAATCAGGCAAAATGTTTACAAGATGCACAACCTCGCCCACTCGGCGGGGTTTTTTTATGCCTGTCATTTGGGGGTGACAATGTCACTAGATAAAGCCACGATTGCTATCGCCACTGGCACTGGAACGACGGTCGGAGTCAGTGCCGCTAAATCTGCGCAAAGTGCGCAATCTTTGTTAAATTCCAGTATTTCACAGATATTAGCGGGTGATTACACACTCTACGGCTCTGATATCGCTACGATAGCCGGTATCGTTATGGGCGCTCTCGGTATTGTGGTTACGCTCTATCGTATCCGCGTCACTAAGCGACTCGCCAATGCGTTATAACAAGCTGACTACGGCGTTAATCGGAGCTGCTATCGGTATAACGGGCGGTTTTGAGGGTTACAACCGCATCGCATACCAAGATAGCGGGGGAGTG # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 81507-81058 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWJ01000065.1 Vibrio sp. V32_P6A28T40 scaffold13_size82583, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 81506 28 100.0 32 ............................ TTCCACTCTCACTGATACAAGCTCGGCTTGTT 81446 28 100.0 32 ............................ GCTCTATCTAGCACTTTATGACCATGAAACAC 81386 28 100.0 32 ............................ GATCAGTCGAAAATCAGCGTCAAGCCGCAGTT 81326 28 100.0 32 ............................ GTTCATTTTTCTAGCGAGCGACATTATTAACT 81266 28 100.0 33 ............................ TCACTACTCCTCCTTGAGGAAGTAACGTTACAT 81205 28 100.0 32 ............................ TTCTTGGCAGGGTAACCCAGTGCGTCAATTCG 81145 28 100.0 32 ............................ TATTAAGTTAGCAATCAAGCTGTTAATCGGGC 81085 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GCAAGCTTTTTGCATGATTTACAAGGTTTAAACTGGCTTGGTCCGTTATCTGGTTACTGCCAAGTGAGTGAGATATTGGCTATTCCTGAACAGGTGCAATATCGAGTGATCTCAGTAAAGCGTAGCAATTTAAGTCAAGCGAAGCTCAGACGTTTGATCGCTCGCGGTAGCATCGATAAAGAAGGTGAAAAACGTTACAAAGTGAAAATGCTTAGCCAAGGTTTTGATAATCCGTACCTAGATTTATTCAGCAGTTCGACGAAGCAGGTACATCGTAAATTCTTTGAGTTTGGTGAAATACAGCCACTGCCAGTATCCGGAAAGTTTGACTCCTATGGGCTAAGTCATACCACTACGGTTCCTTGGTTTTAACCCTATTTTTGCTCTTTAAAAATAACCTTTAAATACAAATAGTTACAGCATGTGATTTAAAATAGGGTAAAAATGGCTTTTTTACTCTAACTGCTTGTTGTAACTTATTTTTATGTTGTTATTCTATA # Right flank : AACCATTACACGCTCACCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACCGATGCCAAGTGCTTAAGTGAGCGATCAATGGTCACCGTTTACTGATACTGCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTTGTGTGGTTTTGGGATATGATCTCCATAGATCCCCGTCATATTTTGCCTGCTACTGTTGTGAGGCAGGGAAATGAAGGTGTAGCGATCATCGAAAACTGATCCACTAAATACAATTAGTCAGCATAGACTCCCACCTTGACGGCAATGATGCTTGACGCTTTGAATATTCGATTATTCACCGTGATTACAAGAAAACGTGAGTTTCTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAATACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAATGAATTGCATTTTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //