Array 1 1708894-1711788 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRCN01000001.1 Aggregatibacter kilianii strain PN_528 NODE_1_length_2074821_cov_65.7166, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1708894 32 100.0 35 ................................ TTGTATACTCTGCACTGGTCGAACGACGTCCCAGT 1708961 32 100.0 34 ................................ AGGCGTTCCAACAACCAACCGGTGGTCACCTTGT 1709027 32 100.0 35 ................................ CTTTATCTGTCGTTAGACTATACACTTTGGCGTGG 1709094 32 100.0 35 ................................ CACCTTGCGCATCGCTTTAATGGCTTTCCACAAGT 1709161 32 100.0 35 ................................ TGCATCGGGTCGGTAAAATAGATAATCGACCCCGC 1709228 32 100.0 34 ................................ GTCGAAGGCACACGAGAGATGACCGCGAACAAGT 1709294 32 100.0 35 ................................ TACGCCGAAGGTGATGGCTCAGCGCTGATTATTGA 1709361 32 100.0 36 ................................ GTCTATTGTAGCCATTAAAACCTCAATCTAAAAAGG 1709429 32 100.0 37 ................................ AGCAAAGCCAGGATCTATTTATTCAAAATTTATGACC 1709498 32 100.0 35 ................................ TTTACAAATTCTAATTTCCCAATAGCAGCATATTG 1709565 32 100.0 35 ................................ ATCGCAAAGTTGTTGAAGCCTTCAATAATTTCAAG 1709632 32 100.0 33 ................................ CGGATACCAAATAAAATAATAAAAATAAAATGC 1709697 32 100.0 33 ................................ TGGTTCTGTGGTTAGGGTTGATGGGAATCCTAG 1709762 32 100.0 35 ................................ TCCACCTGCTGATAATGGAGGTTTTGACACTTCAA 1709829 32 100.0 34 ................................ CTATCGTAAGCCAGTCAATATGAAAATTCATTTT 1709895 32 100.0 34 ................................ CCTTTACCATCACCGGAAGATGAAGAACCATTGC 1709961 32 100.0 35 ................................ TTTACCTAATTTATCAATGATATAGCCTGTTATTG 1710028 32 100.0 34 ................................ GATATTTTGAGTAACTATGCCGTCACTTGTCGTT 1710094 32 100.0 33 ................................ GGATTATGTTACAATTCGTAGCGCGGTAAAATC 1710159 32 100.0 33 ................................ ACTATCCCCATCTTTTACTATATTAGGATTTTG 1710224 32 100.0 33 ................................ TCGATGAAATTTAAAGACTTGAGCGAAGCTGAA 1710289 32 100.0 35 ................................ AAGATCGCCCAAGCGATCCGGTATGGACTTACACA 1710356 32 100.0 35 ................................ AGAATCGGCGAATTGTGCGGCAGAATATTTGTGCT 1710423 32 100.0 34 ................................ TGCAATTAAGCTGTCTGATAATGATAGTTTTGAT 1710489 32 100.0 36 ................................ CGCTCGTTGCGCGGATAAAAGTGCGGCCTGTTTTTG 1710557 32 100.0 34 ................................ CATTTAGTGCTGAGTGTTCTCAACTTGCCACTCG 1710623 32 100.0 35 ................................ CATATAATCCAAGCTAACATACCGCTGAAAATCAG 1710690 32 100.0 34 ................................ AATAAGGAGGCTTGACATGAGCAAAATCATCGAA 1710756 32 100.0 33 ................................ AGCAGGGAAGAAATCACGCTTAGCCCACGTTCC 1710821 32 100.0 35 ................................ GGCGTAAGTGTCAAATTTAGAATCACTTGTCATGA 1710888 32 100.0 35 ................................ ATATAAAATAACGGAGGCACAACAATGACATTTAA 1710955 32 100.0 37 ................................ TGGCCCCCTTTGATTGAATTGCATTAAGTAGCTCCAA 1711024 32 100.0 35 ................................ TAAACAAAAATAGGAGAAACATAATGAATCAAGAA 1711091 32 100.0 37 ................................ TGGCCCCCTTTGATTGAATTGCATTAAGTAGCTCCAA 1711160 32 100.0 36 ................................ AAGTATTGAAATTATGCCGAACTTTCGCAATAGCGG 1711228 32 100.0 34 ................................ GTTCGTCTCGCGGTCTGAACCCGGTGCGGTCAAC 1711294 32 100.0 35 ................................ TCATCAATAAGACGTTGTGCATCTGAGAACAAGGG 1711361 32 100.0 32 ................................ GCGCCGTGCTCAATCTTGGCAGTGCAGACAAA 1711425 32 100.0 34 ................................ GGGTGTAACAGAACGCCCCGAACTTCTTCGAGCG 1711491 32 90.6 35 ..........T..G.T................ GCCAAAGGTGACCGTGGCAAGGCACATGAAATCGC 1711558 32 90.6 34 ..........T..G.T................ CAGTATTTAAGTTAAGGTGTTTAAATTTTATAAA 1711624 32 93.8 35 C......T........................ AGGGTACCACACCACCCCGCCGTGCCAGCCTTTAT 1711691 32 93.8 34 ..........T..A.................. TCAAAGTAGATCACAAAGGTGGTGAGCATACCGC 1711757 32 96.9 0 .......................A........ | ========== ====== ====== ====== ================================ ===================================== ================== 44 32 99.2 35 GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC # Left flank : TTGATGAGATAAACCATGTTAATGCTGATTACTTATGATATTTCTTTTGACGATCCAAACGGGCAAGCGCGATTGCGTCATATCGCAAAACATTGCTTAGATTACGGCGTACGCGCGCAATATTCGGTATTTGAATGTGATGTCACGCCTGACCAATGGGTCATGTTGAAAAACAAACTGTTGGAGACCTACGACCCTACATGTGACAGCCTGCGTTTTTACCATTTAGGCAGTAAGTGGCGCAATAAAGTGGAGCATCATGGGGCAAAAGGGGCAGTGGATGTATTTAAAGACGTGCTTGTCATTTAGTTCGCTAACCTGTTGCTCTCATTAAAACCCTGATGGGATAGCGATCTTTATTTTCTTTAACAATTTGGATAAGTTAATTTATTTGTATAACGGCGGTATGGCCGTTATGCTTACTAAACTCCTTATCATAAAATCAGTTAGCGAAATACAGTGTTTAATCTGCTGATTTTTCTTGCTTTTTTAGCTAGGGA # Right flank : CTAACGCTTATATATCAATAAGATCAAGTAAGATCGCAGCCACCTTTGGGTGAGTATATATTTTGTCTTTACGAAAAATAAGTGATGTATAAGTTTCAAGCTTTTCTGCAAAAACGTCTGGAAAATCCACCGCACTTTTCTTTCATAAAAATAAAAAGCTGAACCTCTTTCGAGATTCAGCTTTTCTTTTTGGGTTAGATCATTTTAACCGCTCTTTTTATTTATCTACGCTGAAATATTGTTACATTTTCGGAATTTCAACGCCTGAAGAGAGCAGGTCTTGAATATCCGATTTCAGTACATCAGCTTTTGGCCCATAAATGGCTTGAATGCCAGTGCCTTTGACGATAAAACCCATTGCGCCTGCTTGTTTCCAAGCCGCTGCATCGCCCACTAATTCAGGATTATGCACAGTGATACGTAAACGGGTCATACAAGCATCTACCTCGGCAATATTGTTTCGTCCGCCAAGAAGATTGATGATTTGTACCACTTGCGCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //