Array 1 581211-583442 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045590.1 Lactobacillus helveticus strain TK-J7A chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 581211 32 100.0 34 ................................ AATGACTGATGAACAAAAGACAGCATTGAAGAAT 581277 32 100.0 36 ................................ TGTTCAGCTCTATCTTGATGTCAAAGATCCTAACGG 581345 32 100.0 36 ................................ ATTCTGTAAGGACTGAAACACAAACTCTAAAATATA 581413 32 100.0 34 ................................ ATCGTTATGCAGGTATTACTACTGCTACTAATAC 581479 32 100.0 35 ................................ TCAGGAGATACTGCCGTTGGCTTTGAAGATAAATA 581546 32 100.0 35 ................................ AATTCATTACTGGCATTACTCCAGTCACTGCGCCA 581613 32 100.0 35 ................................ GAAAGGAAATATATATGTCAGTCAAAGTTAATGGT 581680 32 100.0 35 ................................ GATTTTGTTAGAAAATTAACCGATGATTTTTTACA 581747 32 100.0 34 ................................ TACCCACCTAGCTTAGCACCTACATGGAATGACA 581813 32 100.0 36 ................................ CATTGTAGTAAAAGTTGCAGGGTCTTGAGTAAGAAC 581881 32 100.0 34 ................................ AATTAAGTCTAATCATAGGGGCAATAATTGCTTA 581947 32 100.0 35 ................................ TTTTTCGTCTTCTGCTCCTAGTGACTTAGTGAGCC 582014 32 100.0 34 ................................ AAGTGAATCGACAGGTATTGCAGATGATGATTTA 582080 32 100.0 35 ................................ AAGATGTGGAAGAGTGCAAGCACACACAGTCCCAA 582147 32 100.0 34 ................................ TTAGAATACTTATGATCCTTAGATAGATGAACCG 582213 32 100.0 35 ................................ CTCTGATCTGCTCAGCACGTTGCTCTTGCTTTGAA 582280 32 100.0 35 ................................ GATTATTCGGAACAACAGATGATCCTAAATGCTCA 582347 32 100.0 35 ................................ CTAAAGCATACTTAGTAGCATATGAACTGGCTGAC 582414 32 100.0 34 ................................ TACAAACACTTGCCAACTTATAATCCACAAATGC 582480 32 100.0 34 ................................ AAAGGTGTGTGGATACCTGCTGAATATTGGTTAG 582546 32 100.0 35 ................................ AGCATCAACGGCTCTAATTATGTCATTGCCGGTTT 582613 32 100.0 34 ................................ ACCTGATCAAACGTTAGGCAATAGATTAACCGAA 582679 32 100.0 34 ................................ TTTACGAATGTCTTGCCAATTAGTATATTTACTT 582745 32 100.0 34 ................................ AGAATCAAGACCACCTGTTAGCGTTTTACCACCG 582811 32 100.0 35 ................................ AAAGAACATAGTTTGCAGAACTGTTTCCAAGTAAA 582878 32 100.0 36 ................................ GGCTTTAGATGCGTCAAATGCCGCCTGTGGGCTATC 582946 32 100.0 34 ................................ AGAAGATGGATACAATTTTTAGAAATTCCAGTCT 583012 32 100.0 35 ................................ ACACCATATGTGGTCAACGCTTTAATTGGATTACG 583079 32 100.0 34 ................................ ACTAACTGGAACATCCAAGTACTGTGCGGAAACC 583145 32 100.0 35 ................................ ATCGGCTAATTGCTTTTCAAGTGAATCAGCCTTTG 583212 32 100.0 34 ................................ ACTGAGACGCTAGACGCTATTAGATCACAGTCAC 583278 32 100.0 35 ................................ ATCAAGCTTGCCAACGGGTCGATTTTATTCTGTGA 583345 32 100.0 34 ................................ TTTTGAATAGATGGCATGTAAGTCTGATATAGTT 583411 32 96.9 0 ...........C.................... | ========== ====== ====== ====== ================================ ==================================== ================== 34 32 99.9 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGTGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTTAGGTCCATTGCACTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCGGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //