Array 1 9477-10338 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACNBN010000013.1 Pseudomonas sp. FW507-12TSA SRX4123311_contig_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================================================================= ================== 9477 28 100.0 32 ............................ ATTGAAGGCGGGCCGTTCATGCAGGCAACCGA 9537 28 100.0 32 ............................ TGGGAGCTCAGGCAGGTATCTTCGATCTGCTC 9597 28 100.0 32 ............................ GCCATGGGTGTCAAAAAGGGTTGTGCGACCTT 9657 28 100.0 32 ............................ TGATCATGAGGTCGTGATTGTCTTCGACCCCA 9717 28 100.0 32 ............................ ATCGCCACGAAGGACGGCGACTACCTGCGCAT 9777 28 100.0 32 ............................ GTGGCGACACCGGCAGTGGTGGAGCTGGTCAG 9837 28 100.0 32 ............................ AGTCCAGTACGGGCATTCCCTATGTTGAATCA 9897 28 100.0 32 ............................ CGGCCCGGATAAGTCGGTCGCTAGCACCAGGA 9957 28 100.0 31 ............................ GCTTGCGCCGCCCCCACCGACCGCCCCGGCG 10016 28 100.0 32 ............................ TGCACCGGCGTTACAGCCGCATCCTGCTGGAG 10076 28 100.0 32 ............................ AAGGACAAGTCATGCCTGAAGAAAGAACGGTA 10136 28 100.0 32 ............................ AGAGTCGTATTCTTCCTGGCCGAGATAGTCGC 10196 28 89.3 87 ...........C.C...T.......... CCAGTCCTTCAGCGTCCTTCGGTGCTGTTTATCTCGATTGCCGAACAGGCAGGCAACACACAATCCATCATCAATCCATCGGCACCC 10311 27 85.7 0 ...-.........G........G...G. | T [10332] ========== ====== ====== ====== ============================ ======================================================================================= ================== 14 28 98.2 36 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GGCCCTGGGCCAGTTGCTGGCCATCGATTGGCTGACCGGTATGCGTGACCATGTACAGATCGGCCAGCCCTGCTCGGTGCCGACGCCGGTGCAGCATCGCCATGTCAGCCGGGTACAGGTCGATAGCAGCCCGGCACGCCTGCGTCGCCGCCTGATCAAGCGCCATGGGTTGACCGAGGACCAAGCCCGCCAGCGCCTGCCCGACAGCGCGGCGAAACGTTGCGACCTGCCGTTCGCGGTGATGCGCAGCCAGACCAGCCATCAGCTGTTCAACCTGTTCATCCGCCACGGCCCGTTGCTCGAACAACCCCAGCCCGGCACGTTCAACGGCTATGGCCTGAGCTCCAGCGCGACAGTGCCCTGGTTCTGACCCTTTTTTCCGGGTGCCGTGGAGCGCTTTGTAAAATCAATGACTTACAAAGCGCTTCAGAAAAAGGGTGTACAGCAACCTTTAACGGCCTTTCTTTTGAAATTCAGGAGGTTATAGAGAAAGTGCTCTA # Right flank : ACCCGCTGCACCCGTCGCCGCTGGCCTGGGACTCCCGGGCCAGGACGCGGCTTTGTCACATCCCCTTCATCGGCGCTGGCTAAGGTGGCCTCTTTTGACCATGTCAGGGAGTCACCATGAGCGAGTTCAACCTCGGCCGTCGACGGATCATGCAAATCGCCGGGGCGGGGATGTTGCTGCCCAGCCTGGCGCCGGCGGTGATCGCCTCGGTCAAGGATCGGCCCAAGCTCACCGATGGCGTGCAGTCCGGGGACTTGCAGGGCGATCGGGCGATCATCTGGAGCCGCAGCGACCGCCCGGCGCGGATGGTGGTGGAGTGGGACACCCGCAGCATGTTCACCAACCCGCGGCGCCTGGTGTCGCCGCTGGCTGATGCCCGCACCGACTTCACCGCCCGGGTGGACCTGAGCGGGCTGCCGGTCAACCAGGCGATTTTTTATCGGGTGACCTTCGAGGATGCCCGCACCGGGGTGGCCAGCGAACCCTGGTTCGGCCATTTG # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.32, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //