Array 1 29140-29703 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADMNT010000003.1 Lacticaseibacillus rhamnosus strain 1001287B_170213_A1 NODE_3_length_400366_cov_27.6537, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     29140	    36	 100.0	    30	....................................	CCTCCAGAGACCTTAGCCACCTTTGTACAG	
     29206	    36	 100.0	    30	....................................	ACAAAAACGTCCCCGGTGGCAATGGCTATG	
     29272	    36	 100.0	    30	....................................	ACGTCAGATTATTTTTAACACATATAACGG	
     29338	    36	 100.0	    30	....................................	TTCATGTCATCAGTAATGAGCACAACATGC	
     29404	    36	 100.0	    30	....................................	CGCATCAGTCGAATGATTGTTGACGAGAAC	
     29470	    36	 100.0	    30	....................................	ATGACCGGTTCGTTTTTGGGCGATCTTTCG	
     29536	    36	 100.0	    30	....................................	ATTTGAGGTCGTTGACTGTAGGACAATTGG	
     29602	    36	 100.0	    30	....................................	GCTTTGCGAGGGAAAGGCAATGACCGTGTC	
     29668	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
         9	    36	 100.0	    30	GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC	                              	       

# Left flank :   GAGCTGGATTTGGACAAGTTATTTCAACGCTTGCTCATCAAGAAGGTAAGCCAATTGATAGATGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAGGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTGCCAACATCAGTCATTATTTAGATATTGGCAGTCTGAGTAAGCTGTTAGATCAGGTTAAGGACACATCGTTGGAATTACTTCTCATTGAATTTTCAGATGTCGAACGTAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAAAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGACTGTGTGAAAACACCG
# Right flank :  CTTCACTCTCTTCCATGTTCTAAAGTGTAGAGTCTCAGGCAAATATCAGATCAAAAAACACCTTCAGTGAAGACGCTCCTCATAAATGCTATGCAAATACAAAAAGAAGGTAACATCGATGTCAAAAGCGAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.50,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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