Array 1 65406-66471 **** Predicted by CRISPRDetect 2.4 *** >NZ_QZYZ01000014.1 Pseudomonas aeruginosa strain HUM-231 PA3_G1_NODE_21_length_108575_cov_31.8823_ID_41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 65406 29 100.0 32 ............................. CCATGACTACGTTCACCAGCATCGTTACCACT 65467 29 100.0 32 ............................. GTGAACGATGCGAATCGGGCGGGGGTTTGGTC 65528 29 100.0 32 ............................. GCTTGGTAGATGCCTGGAACAAGTCGGTCAGC 65589 29 100.0 32 ............................. CGCGCTGTCCTCGGCCTGGACTGGACCATCGA 65650 29 100.0 32 ............................. TGGGCGAACGACGGCAGCGTCACCCAGGCGCA 65711 29 100.0 32 ............................. ACAGGGACGTTCTCCGCGAGCTGGCCATCGAC 65772 29 100.0 32 ............................. GCAGAGCGGATTGCTGCCCGCTTTGTCGGCAC 65833 29 100.0 32 ............................. GGGGTGGTAGCACCGGACTCGCGGATCTTGAA 65894 29 100.0 32 ............................. TCATATAGCTTGTATTTTTCCTTGCTATGAGA 65955 29 100.0 32 ............................. AAAAACGACGGCATTCACTACGCGCGCCAGGC 66016 29 100.0 32 ............................. GCGTTCATTTCCCAGGACGTGGACCAGCTGCG 66077 29 100.0 32 ............................. GCCCCAAAAAGCGTTGGCGTCATCGGCTGGCT 66138 29 100.0 32 ............................. TTCATGAACGGCAGAACGTTGAGCGCCGATTT 66199 29 100.0 32 ............................. GTTGTTCTAGAGTCCGTTCAGGAGATGCTTCT 66260 29 100.0 32 ............................. AGGTATTCCTTGCCCTTGGCCAGGAGCACGCC 66321 29 100.0 32 ............................. TCATCGATCGTGGCGGCTGCACTGGCTGCCTG 66382 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCG 66443 28 79.3 0 A..........A..C..-.....A....T | C [66447] ========== ====== ====== ====== ============================= ================================ ================== 18 29 98.3 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTCGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACCGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTTGCATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGAATGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : TGTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCATGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTAATCACCAGTGTCAGCCGCCAGTTGCCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGTGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGGAGCAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 75644-76955 **** Predicted by CRISPRDetect 2.4 *** >NZ_QZYZ01000014.1 Pseudomonas aeruginosa strain HUM-231 PA3_G1_NODE_21_length_108575_cov_31.8823_ID_41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 75644 29 100.0 32 ............................. GCGTTTGTGGACCGCTCCACGTCGCCCCAGGG 75705 29 100.0 32 ............................. ACCGGATGCAGTCTTAATCCCTTTTTGCGTCG 75766 29 96.6 33 ............................A GTTATGCTGGTGCTGTCATAGATCATGTCGAAC 75828 29 100.0 32 ............................. ACGTTGAGTACGTCGGCGCCGTACTTTTCGTC 75889 29 100.0 32 ............................. CGGGCCTTGGCAGCGAGCAGGGCCTTCATGCC 75950 29 100.0 32 ............................. CGCACTGATGCCAGAGCCGGAGTCGCGACCGG 76011 29 100.0 32 ............................. TCGGCCATCACTGGCAAGGTGCGCGAAGGCGT 76072 29 100.0 32 ............................. GCGCTTCACGGAGACGGCCTGCTGTTCCCTGC 76133 29 100.0 32 ............................. TTCAGCAGGGCGTCAGGGATGGCATCGTGTCC 76194 29 100.0 32 ............................. GCTACTGTCGAAGCCGGCACCACTCTGGACGC 76255 29 100.0 32 ............................. GCCGGATTCCGCTGCCGGGCTACATCATCCCG 76316 29 100.0 33 ............................. CGGGGCATGACTTCAACCCACCCCCAGCCCTCC 76378 29 100.0 32 ............................. TCGCACTTCCAGCCATGGCTGGACAAAGCGGC 76439 29 100.0 32 ............................. CAGTGACGGCAGCAGACGCGGCGATGCTGGAT 76500 29 100.0 32 ............................. TCGGTAGACGCACAGATGGTCGAGCAACTTCG 76561 29 100.0 32 ............................. GCGCAGGGCAAAGCCAAGGTCACCGCCGGCAC 76622 29 96.6 32 ...........A................. TTCGAGGTCAGCGGCTTCGGCCCCGGCGAGCA 76683 29 96.6 32 ...........A................. CCGGGAATGAACGTTCCCATGTCGGCTACGCC 76744 29 96.6 32 ...........A................. GTCGCCAGGCCCACGTCGGCGGATCACCAACA 76805 29 96.6 32 ...........A................. ATGTAGCTGTTACGCGGTCCCGCGGTGCTGAG 76866 29 96.6 32 ...........A................. GTGATGGAGCGGACCGCCCCGAGCACCGCAGA 76927 29 93.1 0 ........T..A................. | ========== ====== ====== ====== ============================= ================================= ================== 22 29 98.8 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTCGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGCCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATTCTGTACGGTAAGT # Right flank : GTGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGATAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : GTGTTCCCCACATGCGTGGGGATGAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 37901-39008 **** Predicted by CRISPRDetect 2.4 *** >NZ_QZYZ01000126.1 Pseudomonas aeruginosa strain HUM-231 PA3_G1_NODE_33_length_77143_cov_28.6399_ID_65, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 37901 28 100.0 32 ............................ AACCAGCACGACAAGACCGTCGAGAAGTATGT 37961 28 100.0 32 ............................ ACCAAGGCCTAGCCACGACCATTTCCCATCAG 38021 28 100.0 32 ............................ TCCCCGGCAATAGCTGGGGCGGAGAGGTATTG 38081 28 100.0 32 ............................ TCGGGAGGCCGGCACCGGATGCAGTTGCATTG 38141 28 100.0 32 ............................ AACTCCATCTTCGAAGCGTTGCGGCGCACTAG 38201 28 100.0 32 ............................ TTGATGGACATGGTGAGACGAGCGGACTTGTT 38261 28 100.0 32 ............................ ATGAAACAGATGCGCGCTACATCGGTCGGCTC 38321 28 100.0 32 ............................ ACCACCCGTTCCAGGCGTGCCGCCACCATCAC 38381 28 100.0 32 ............................ GGGCAATGAGCGACTTCTTCCGTACAGCCTCC 38441 28 100.0 32 ............................ TTCCCCGGATTGAGCCGAAACATGATGCTCCC 38501 28 100.0 32 ............................ AGCAAGCACGCACCGGACGCCGCCCTGTGGGC 38561 28 100.0 32 ............................ ACAGATACCGGGCCGTCCGCGCTTGAGCCGCG 38621 28 100.0 32 ............................ ATCGTCATCCGCGGCAAGGCCAGCAGCATGCG 38681 28 100.0 32 ............................ TCATCTCAACTGCGCCAGCTCGCGCGACAACT 38741 28 100.0 32 ............................ TGCGCCGGAAAGTTCGACAACATCCTGAATTT 38801 28 100.0 32 ............................ TTGTTGGTGCGCACCGACTCCAGCAGCTTGTC 38861 28 100.0 32 ............................ ATCCGCGCCGAGGGCTGGGCATGGGTGGACGC 38921 28 96.4 32 ........................A... TGTCCCGAAGTTCATAAGCGGGCTTAGGGCGA 38981 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================ ================== 19 28 98.5 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAGAGGGTTAGAGATCGCTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGTTTTTTGGTCTT # Right flank : ACGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCACCAGTCGAAACGAAGTCCCTTTCCATGGAACTTCGTTGCGGACATGCCGATGAGGTGCTGATGGGGTTCTTCAGAACCAGGGAACGGAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGTTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGGCGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGGTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 48691-47523 **** Predicted by CRISPRDetect 2.4 *** >NZ_QZYZ01000126.1 Pseudomonas aeruginosa strain HUM-231 PA3_G1_NODE_33_length_77143_cov_28.6399_ID_65, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 48690 28 100.0 32 ............................ TTCTATCTGGAGGCTATCGCGAGCGATGCGAC 48630 28 100.0 32 ............................ AGGCGAGCATGCTGGCGCGAGAAGAGAACAAC 48570 28 100.0 32 ............................ TGGCCGTGACGTTTCACTGGGCGCCGGACCAT 48510 28 100.0 32 ............................ TGAGGGTTTGCTCTGACCATGTCGTGGTGCTC 48450 28 100.0 32 ............................ GTGCGCGGATGGCTGGTATCTCGAGCACGATT 48390 28 100.0 32 ............................ AGGCAAACAACGGAAAGATCACCACCGAAGGC 48330 28 100.0 32 ............................ AACGAAACAGGCCCAGCACAGCCGCTTGATAA 48270 28 100.0 32 ............................ AAGGTGACGATGCACAGCTGTTGCGCGCGGTT 48210 28 100.0 32 ............................ TTCGCGAAGGCGTCCTCGACGTGCGCCCGAAC 48150 28 100.0 32 ............................ ATCCTCGAACAGCCCGGGTTCGGTCGCCTCCA 48090 28 100.0 32 ............................ AGGAGTTTGCGGCCCCGCTCCCTGCGGCTCTC 48030 28 100.0 32 ............................ TTCACGGCGGGCTTGATGTCCGCGTCTACCTG 47970 28 100.0 32 ............................ TTGCCGAGTACGATGCCTGATACATGAATCCA 47910 28 100.0 32 ............................ TATGCGCCAGGCCGCGTGCTTGTGTGCGGTGT 47850 28 100.0 32 ............................ TGGCTGTGGTGCCGGCAGTCCGGGGAGGCGTG 47790 28 100.0 32 ............................ AAGTGCTGGCACAGTACAGGGACAAGCGGTCC 47730 28 100.0 32 ............................ ATGGCGCACCCGAAGGAAACCCGCGACGCCCT 47670 28 100.0 32 ............................ TGGCCGCAGGCGAGCAGGTCAGCCGGGGCCAT 47610 28 100.0 32 ............................ CCCAGACTCTCAATCATCACGTCATTGCGCGC 47550 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 20 28 100.0 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGGGGCATCGCCCATCAAAAGACCTTTCGCGCCCGAACGGCACGGTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : CTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCACTACCAAACATCCGAATATAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGGGACAGGCCACGGTCAGCATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATTGGTAGGCTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //