Array 1 40684-43595 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZJO01000007.1 Salinicola endophyticus strain CPA92 Salinicola-sp-CPA92_contig_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 40684 28 100.0 32 ............................ ATCTGGCCGCTTAGATCAGGCATGAAGCTCAG 40744 28 100.0 32 ............................ CGCGACCTGCCCAGTGAGCAGCGCACGCTGGA 40804 28 100.0 32 ............................ AGAGCGTGCCGAGCCACGATGCCTGGGGCATG 40864 28 100.0 32 ............................ ACCCATTGAGGGACACCTACGTAGAAGTCCGC 40924 28 100.0 32 ............................ ATATAGGGGAGATAGTCCTGGCCGCAGGTTTC 40984 28 100.0 32 ............................ GTCATCGGCCTGGCCGGCAGCCTGCTCTGCTC 41044 28 100.0 32 ............................ AACTGGCGCGCTGCAATTTATGGTGTCTATAA 41104 28 100.0 32 ............................ AGCTCATGCCGCGCCAGGGCAGCCACCCCAGC 41164 28 100.0 32 ............................ AGACTGTCATGAAAGCGACTGGGATAAATATT 41224 28 100.0 32 ............................ TCACTCGCCCCAGTAGGTCAGTTCTTCGTCCG 41284 28 100.0 32 ............................ AGATAGCGCGAGAACGCATCTCCCAGAGAGAC 41344 28 100.0 32 ............................ AAGTTGAAGAAGGCTTCCTTCGAGGTGACCCA 41404 28 100.0 32 ............................ TGAACGTATGGATGCCAGACCGCAGGCTAATT 41464 28 100.0 32 ............................ TTCCGCACCAGCTCTCCCGGGCGCAGATTGAC 41524 28 100.0 32 ............................ ACCCCGAGAGCGGCACCGTCGTGAAGGGCACC 41584 28 100.0 32 ............................ CCGCTCTGCGTCGCCCTGGCAGCCAGGGCGGC 41644 28 100.0 32 ............................ TCGTGCTTGGACGGCGGCATCTGCAGCAGCAC 41704 28 100.0 32 ............................ CACTCGACTGGCTCGCGCAGGGTGAGCATTAC 41764 28 100.0 32 ............................ TGTAGCTGTCGAGTGGGCGGATGACGCAATCG 41824 28 100.0 32 ............................ ACGCCGCAGACGCCGCATGATGCTGCCGCCGA 41884 28 100.0 32 ............................ CTGATCTTTCCAGACGATGAGTCGACTGGTGA 41944 28 100.0 32 ............................ AACGCTGCAGGAACGCTGCCCAGCCGCGGATG 42004 28 100.0 32 ............................ TACCGACCCGGCCACGGTTTACGGCGCGATCT 42064 28 100.0 32 ............................ TGCTCGCCGTCCTGCTGGCGTGCGCGGATGCC 42124 28 100.0 32 ............................ TGGTCAAGGGAACCGGTGCCGGCACCCCGAAA 42184 28 100.0 32 ............................ CGCTCAAAGCAGGCATCCCAGGCGCCCTCGAG 42244 28 100.0 32 ............................ TCGGTGACGGGCCGCTCAGTGAACGGCCGGGC 42304 28 100.0 32 ............................ ACGCTCAAGGCGTCTTCGTGAATGCGTTGCTC 42364 28 100.0 32 ............................ GTAAGCCAACGGCAAGCCCTCCAGGTCCGTGA 42424 28 100.0 33 ............................ TCCTGCAATGCCTTCGTAATAGGCATTCGACAT 42485 28 100.0 32 ............................ GGGAGGTGACATGGCAGAGCGAGCGGCCTGCC 42545 28 100.0 33 ............................ ATCCACATCGTCGTGACCGGAAACTGCCTGCAT 42606 28 100.0 32 ............................ TACGGCAAGAAGCAGAACCTTCTCGCTCAGAC 42666 28 100.0 32 ............................ ACGGTGAGCACGGCCAGGGTGGTGACCGCGGC 42726 28 100.0 32 ............................ CGCATGCGGAGACGTGAAGGCTACCAGTAGAA 42786 28 100.0 32 ............................ AATTCGACCTCAACCATCTCGCGATGTGGCAG 42846 28 100.0 32 ............................ AATCGCGTGTTGCCACCGGGTAGCCCGGAGCC 42906 28 100.0 32 ............................ TGGCTGCTCGAGCAGGCTGATGAGATCGAAGC 42966 28 100.0 32 ............................ GGCGCCGAGAGGCAGAGCGCCAGCTATTCATG 43026 28 100.0 32 ............................ AGCAAGCTGCTATAACTTTGGCCTAGCTGCCC 43086 28 100.0 32 ............................ ACCTACGCGCGACTGCGCCGGGTGTGGGAGTC 43146 28 100.0 32 ............................ CGTGGAAGGCCGCCTCGTTCAGTTCATTCTGG 43206 28 100.0 32 ............................ TGCCAGTGCAGCGGCTTCGACTTAGCCATCGG 43266 28 100.0 32 ............................ AAGTGGCGAAGGTGCTGCGCGACACGGCACTG 43326 28 100.0 32 ............................ ACCGTCACGAGGAAGTAGGCATGCCGCTGGAC 43386 28 100.0 32 ............................ AGACGGAACAGGCGCAAGGCGGCCTCGGTGTC 43446 28 100.0 32 ............................ CCGAGCATGACGACGCCTATGGCAGCGGCGAG 43506 28 100.0 34 ............................ CCCGGGGTGACGATGCGGTACCGCAGGCCGCGCA 43568 28 96.4 0 ......................T..... | ========== ====== ====== ====== ============================ ================================== ================== 49 28 99.9 32 GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : AGAGCCTGGCGCAGCTCATGACGCAACCCTGGCTCGCCGGCATGCGCGAACTCGTGGAAATCGCCGAAATCTTGCAGGTGCCCGACGACGCGCTACATCGCGCGGTTCGGCGCCGACAGTTCAAGACCGGCAATGATAGCCAGGTCAAGCGCTACGCACGGCGTCACGCTATCGACCTCGAAGAGGCACGAGCCAGGTTCGCACGCAGCAGCGAACCACGCATCACCTTGCCCTTCGTTTCACTCAACAGCCGATCCAGTCAGCAACGCTTTGCCCTGTTCGTCGAGCACGGCGAACCGCAGCCGACACCGATCGGTGGCTCCTTCAATCACTATGGCCTGAGCCAGGGGGCAACCATCCCCTGGTTTTGACCCTTTTCTCGAGCGTTTTTATAGCGCCAGGAAAAACAAGGGGTTAGCGACGCCTCCGCAAAAAGGGAGGCGTCGCGTTTTATGGCTATTGCTCTTTAACAATCAGGGTATTAGCGTGCAAAAGCGCTA # Right flank : ACACCAAGGCATCAGACAATTGATAGTGGATGAAAGGCACATAGGCGCGGCCACTTCGCAAGTGTCTGCGACAGACGAGGGGCCAGTGATGGAGGATCCGCGCCACCGTCGCCATGATCTTGCAACGAGGTCGCCCGAAGACAGACTCTTGGCGAGTGCCGCCCTTACCAGCCGGCAGGCGGTGGCTTTCGTGGAATGCGTGCCGGCGCGCAAACGATCCATTCATGCGAATTCAGACTTCGCTGATCGCACAACAGCAACACACGGATCGTGATGTCGCACTTGGCGCGATAGCCTTCGTCGACATCACGCCAAGCGCTACAGAGTTCACACGATCAGGTCTTCATCCTTCCAGAGGCGGAACCCGCCATCGAAGGCGAGTGCGTTGTCGCCGCGCCGGCATTTCGGTGGGAGTGTGTCGAGCTTTTCAACATTTCCGCCACCGATGACGATGTAGTCGGGCTCCAGTGCCGCGGAGAGACGCTCGACGACATCGAACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //