Array 1 108322-106320 **** Predicted by CRISPRDetect 2.4 *** >NZ_QNQN01000061.1 Pseudoalteromonas sp. A757 Ga0081536_1014, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================================================================================================================ ================== 108321 29 100.0 32 ............................. GTAGCAACGCCAGAGAGCGTTGGCATCCATTG 108260 29 100.0 32 ............................. TCTGTTCAGTATTATCCGGGTAAACACCCCTG 108199 29 100.0 32 ............................. AGCGCACACTGCAATAGGTATTTCACACCAGA 108138 29 100.0 32 ............................. TGACCTGAACCCCCGCCTGTTTGTTGTTTTCG 108077 29 100.0 32 ............................. CGCCCCCCTTTTGGGAGTGCCTGCGCCAAGTA 108016 29 100.0 32 ............................. CTTTACCCTGCTGTTGCAACTGATGATGCAAC 107955 29 100.0 32 ............................. TGCAGCGTTTTTATGTAGACGCATTATATTTG 107894 29 100.0 32 ............................. ACGAGACCACCGAGGCATTCGATTGTATTTCA 107833 29 100.0 32 ............................. CGACTGCGCTGTCGGGTTGTTGCTGATGGGCC 107772 29 100.0 32 ............................. CGAGCAGTTAGCTGATGAATTAGAGGTATTAA 107711 29 100.0 32 ............................. GTGATCGAGAAACTGCTGTTTTGTGTTTACCA 107650 29 100.0 32 ............................. AGTTGAAATCAATTAAAGAGCGTCTAACTAAG 107589 29 100.0 32 ............................. ATGACGCACTGAGCATTGACTGGTCAGAAACA 107528 29 100.0 32 ............................. AATTGACCAAACTTAATTTAGATGGGTTAGCA 107467 29 100.0 32 ............................. CGCAGAGTGACATAGGAATAATTGAGCTGGGC 107406 29 96.6 32 ................C............ AATGCAATAAACAAACGCATTAGGCAGCTGAA 107345 29 96.6 32 ................C............ GGCTTGGTCCGTTTCTGTACTGCGATGCTCTT 107284 29 96.6 31 ................C............ GGCTCAATTTCGGTGGGGGATAAATTTGTAC 107224 29 96.6 32 ................C............ AGCATATAAAATCAGGCTTTATGCCAATAAAT 107163 29 96.6 32 ................C............ GCCGTGTGGCACTTTTCGTTCATTTCCATTTA 107102 29 96.6 32 ................C............ CTCTCCACTGTAATTGTGATGTCCAGCAGAGC 107041 29 96.6 32 ................C............ TCTGGTAACAGGCTGAATTTAATGATTTTTAC 106980 29 96.6 32 ................C............ TCCATTAGATGGGCGTTTGGCGACCCTTACAC 106919 29 96.6 32 ................C............ TGTGCCAAAAATACCCCGTAATTGTATTACGG 106858 29 96.6 32 ................C............ AGTACGCCGCCATTCAGCACTTTGGTGGTAAA 106797 29 96.6 32 ................C............ GGACAACGGGCTATTATAAATGGGTTTCCTGT 106736 29 96.6 32 ................C............ AAATAATATTGACAGTTATATTTAATTAGGCT 106675 29 96.6 32 ................C............ TATCTTACGTTTAAATTGCCTACCGAACCTTA 106614 29 96.6 32 ................C............ CCCCAGTAATTAACTAGGGCTAGTATAGCGTA 106553 29 93.1 176 ................C...........T GAGTTATTCACGTCTGAATCATGTGCTGTAATTCGTCCATGAAGCAGCATCCTTCACGCATCCATGCGCTCACCTCAGCAGGCTGCGAAACGGTGATGACTCCAGACTTCCTGTCTTTCGCCCTTCGGGTCAGCAGAGCTGTTCAAAAATATTCCAGATATTTTTGTCGGTCCTAC 106348 29 79.3 0 T.CGC...........C...........T | ========== ====== ====== ====== ============================= ================================================================================================================================================================================ ================== 31 29 97.6 37 GTGTTCCCCGTACGCATGGGGCTAAACCG # Left flank : CATTGGCGATGAAGGTCATCGCAGCGGAGGCCCACTATGAGTATGTGTATGGTTGTGACGGAGGCTGTACCGCCAAGATTGAGAGGTCGTCTGGCAGTATGGCTGCTGGAGATCCGTGCAGGCGTGTACGTAGGTGACGTAAGTAAACGCATTCGCGAAATGATCTGGTTTCAGGTAAGTGAGCTGGCGGAAGACGGCAATGCGGTTATGGCATGGGCAACCAACACCGAGTCGGGTTTTGATTTTATTACCTATGGTGAAAATGCTCGAATGCCGGTGGATTTTCAGGGGCTAAGGCTGGTGAAGTACACCCCAAGAGCCGATGACAATCAGGGAGGGGGTTAGCGAATTATTTCGCCATTCTATCTGTGATTTACTGCTCTTTAACAAGTTGGATATTGAGATTTAAAGGCTCAATAATAGATATGTTTGTACCCAAAAGTTTCGGTAGATTTTAAAGTGTGTTTTTTCTTTATAAAAAACAAGTATATAATTTTAGA # Right flank : GAGCTATTCAGTTCTGAATCATGTGCTGTAATTCGTCCGTGAAGCAGCATCCTTCACGCATCCATGTGCTCGCCTTAGCAGGCTGCAAGACAGTGGTGACTCCAGGTTTCCATTCGGGCCAGTGGAGCTGTTCACAATATTCCAGATATTTTTGCCCTTGCCTGTACTCTCGGAATTAAGCTGCTTCGATCCCCCTCTGCTGGTTATTTATCTACATGACCTAAATCACGCTCAGGATCTAATAAGTCTCTTACTCTTCTTTTTAGCACTTTGGCTTCTGGGAAACCATCATCAGCTTTGCGGCACCAAATTAACGTATCATTGTAGTAGATTTCGAATACACCTTTACTGGCTGGTGCAAGTGCAACTTGTTGTAGGTCATCGGAGAAAGTTGAAAGCAACTCTTGTGCAAGCCATGAGGCTCTCAGCATCCACTGGCATAACACGCAATAACGAATAGTGATGATGGGTTTTTGCATAGGATAGATTGTTACAATTTG # Questionable array : NO Score: 5.43 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.43, 8:1, 9:0.73, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTACGCATGGGGCTAAACCG # Alternate repeat : GTGTTCCCCGTACGCACGGGGCTAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTACGCACGGGGCTAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 119977-118664 **** Predicted by CRISPRDetect 2.4 *** >NZ_QNQN01000061.1 Pseudoalteromonas sp. A757 Ga0081536_1014, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 119976 29 100.0 33 ............................. TCTTGAGCAACGCAAACTTGAACAAGAACTTGC 119914 29 100.0 32 ............................. AATATTATCGCAACAGCAGGTGGGATCCCCAT 119853 29 100.0 32 ............................. TTGAGGCTAATTATTGAGTCAGAGCTTGAGGC 119792 29 100.0 32 ............................. ACTTGAGGCCAAGCGCCAACGCAAAGCCAAGG 119731 29 100.0 32 ............................. AAAACCCCACTAGGGGAAATGTATCTGGCATC 119670 29 100.0 32 ............................. TTGATGTTGTGACCGTAGTAGGTCGTTTAATC 119609 29 100.0 32 ............................. AGTTAGCCGCTATTGAGCTTGCCGAACTTTAT 119548 29 100.0 33 ............................. ATACATAGAGATATTCGTGATTTGGTTGATAAC 119486 29 100.0 32 ............................. ATTGAGTCATTTGGCAACCTCAGTGAGTTTAG 119425 29 100.0 33 ............................. CATTCGACGTGTGGCTTGAGAATAAAGGAGTAC 119363 29 100.0 32 ............................. GTGGTACTGCACTCTGAAAACTTTAGTGCCAG 119302 29 100.0 32 ............................. TACCACGGCCTCAGCAATCTAGTTGCGCCATA 119241 29 100.0 32 ............................. GATCTCAACTGGATATTTTTTCAGTTCAACTT 119180 29 100.0 32 ............................. AGTGTACAATGAGCTTGTATATCTTATCTTGC 119119 29 100.0 32 ............................. GTAATTTTACCGCAGAAAACGGCAGAGTTTAC 119058 29 100.0 32 ............................. CCGTTATAGTTCACCCCAATTTCTGCGCGGGC 118997 29 96.6 32 ............................T TGTTCTCACTCATTAGTAAACTCCACAATTTC 118936 29 100.0 32 ............................. GCAATTGTGCTTGCGCTTGACTTTATAGCTAA 118875 29 100.0 32 ............................. TAAGTATGACGAACTACGACGACAGGATTTAT 118814 29 100.0 32 ............................. CGACTACTCCAACGGTATTCTATTGGCAACTC 118753 29 100.0 32 ............................. TGCGTCATCCGTATCGATTTAGATTTTGTTAA 118692 29 93.1 0 .........................C.A. | ========== ====== ====== ====== ============================= ================================= ================== 22 29 99.5 32 GTGTTCCCCGCAGACGCGGGGCTAAACCG # Left flank : AGAAGCCAGAGCACACAGCGTTATTTGTGAATTAGATGGTGAAGCAATCGGATTCGCAGTGTATTTCTTTAATTATTCTACTTGGCTTGGCAAGCATGGACTTTATCTTGAAGACTTATATGTGTCACAAGACAAACGCGGTGTTGGTGCAGGTAAAGGGATCATGAAGTACCTAGCAAGACTTGCACTACAAAAGGACTGCGGTCGCTTTGAGTGGGTGGTACTTGACTGGAACAAACCATCAATCGATTTTTATGAAAGCATCGGTGCTAAAGCACAAAATGAATGGATTATTTATCGCCTAACAGGGCAAGAGCTCATCGATTTTGCTGAGTAAGTATAGGGAAGTTTATTGGTTTGTTGGCTATACATTATTTGAAGAGAAACCCCCGTTCTTTAACAATTGAGCCGAGTAAACATACGTAGAATTTGTACCCAATATTTTTGGTGAACATTGCAATGGTGATTTTTGCCAATAGAAACAATGAGATATTTTTAGA # Right flank : TAGAACATTTTAGTAGGAAAGCTGTGGTGAGTAGCTTGGCTGGAAGTGGCGGCAGGGCGAGACTCGAACTCACATCATATATAAACTGCATATAACCGTTACCCATTGGAAACACTGCCGTCAAAGTTGATTATTAATCAACCATCAAAAAAGTGCTAGCGTGATCTCACTGTTAGTTTGTCTCAGGTCAATGACTTACTTTGTTTGTTTTGATACATTTATTTTACGAAAATTTTACCAGAGTGTTTTATGCAGGCTAAGGAAGAGCTGTATTTTAGATATATTGAAGCAGTATTGTTTTGGCAGGGAGAAATCCAGACCGGTACTTTCCAGAGTAAATTTAAGCTTTCACGGCCCAGCGCACGGCGTTATGTCACCGACTTTATTGAACGCTATCATATTGCCGCAAGCTACAATGAGTCTGAGAAAGCTTATGTGCTGGCAAGCCCCTTTACACCTAACTACATCTCTCAGGATTTTACTGAGTATACTAGTCTCAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGACGCGGGGCTAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACCCGCGGGGCTGAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //