Array 1 40152-35581 **** Predicted by CRISPRDetect 2.4 *** >NZ_LTBA01000023.1 Clostridium tepidiprofundi DSM 19306 CLTE_contig000023, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 40151 29 72.4 37 ACAACGGG..................... AATTATTATTTATTTTTACTAAAAATTTACTGGAAAT 40085 29 100.0 35 ............................. TAGTTTTCTAAAATTTTAAATGCAATCCAACACAA 40021 29 100.0 37 ............................. TTCGTTTTTCTATATCCTCCAGTATTCCCTCCAACTG 39955 29 100.0 37 ............................. AGAGTTGAGAATATAGTATTTGCTTCACCTGTTCCAT 39889 29 100.0 38 ............................. AGGCTCAGAACATTTCAAAATTTTTAGGATTTTAGAAC 39822 29 100.0 37 ............................. AAATATTCTTCAAAGCATCTTGGGTCTAAATACAAAT 39756 29 100.0 37 ............................. ACAAATGTTTATAAGTCCAGCTAGGTAACTTGTTTAC 39690 29 100.0 37 ............................. TCCCTTTTTTAAATTTTCAACTGAAATTTGCTGAACG 39624 29 100.0 37 ............................. AGAGTTGAGAATATAGTATTTGCTTCACCTGTTCCAT 39558 29 100.0 37 ............................. AACTAATGTGCATAGTCCCATTTCTATTAAAGCCTAA 39492 29 100.0 37 ............................. TAATGGACGGATAGTTATTGATAATATTTTAAACGCA 39426 29 100.0 37 ............................. GTCTCGAAACATATCTGCGCTACGTATTTCTTGCCTT 39360 29 100.0 36 ............................. AAAAATCTAATGGAAAATATAGATATGTGTGGCTCT 39295 29 100.0 36 ............................. TTCCTTATTATCTATTCTTCTACCTCTGAATTTAAA 39230 29 100.0 36 ............................. TACTGCATTAGCTTGATACACATCAGGAATACTGTC 39165 29 100.0 37 ............................. AAGCACTTAAAAAAGTCCTTATTTGTATTTGAATTGA 39099 29 100.0 37 ............................. TGAAAGGAGGCTTTATTAACTTATGACCAATGATATC 39033 29 100.0 38 ............................. TAGCTTACAGAAGGTTAATAGCTTGGGGAGGCGAATTG 38966 29 100.0 38 ............................. ATAAAATCAGTTAGGTGGATATTTTCTTTTATTAGTGA 38899 29 100.0 35 ............................. TAAGGATTTTGAAACACATAAGAAAACGAAGCTTG 38835 29 100.0 35 ............................. GTTATCGAAGCATTGAAGCAGCTAGGGCGTTATAC 38771 29 100.0 36 ............................. TTTTCAACTGCTTCATCTCCTGTGTACCATGTTTCA 38706 29 100.0 36 ............................. ACGATATTTGAAATTATAAAAGGGATGAATATTTCA 38641 29 100.0 36 ............................. TCTAGATAGTTTAGCATATCTTGTATACGCAAACTC 38576 29 100.0 38 ............................. GTTGCTCCACAAATGTATGTTACTTCCAAATTTCTCCA 38509 29 100.0 37 ............................. GTTTTTGGGGAAATTGAACCAAAAGAACTTGTTGAGT 38443 29 100.0 38 ............................. TAAACTTCTAACATCAAGTTTTCTAGCAAGTTTTTCGA 38376 29 100.0 38 ............................. ACACTATCCCTTTTCACTATTGTATTTGCAGTTTTAGA 38309 29 100.0 39 ............................. TTTCTTTGAACTTTAATAAGCTCTGTATTTCTTCCTCTG 38241 29 100.0 36 ............................. TTTTCATTACTATTTTAAGATTTTTAAACATATTAT 38176 29 100.0 37 ............................. CACATAAGCATTGCCATAGTGATTTCTGTTCATTTCT 38110 29 100.0 37 ............................. TGTTCTTTTATATTGTTTTTAATATTGCTCCATACCA 38044 29 100.0 36 ............................. CAACATAGGGCATATATATAACTTCTATTCCTTTGG 37979 29 100.0 36 ............................. TCCTCTACACTTCTTATTCTTCCACCTTGCATACGC 37914 29 100.0 37 ............................. GCTCTAATTTCTCTTGCATAACAATTTTCGCTTGCAG 37848 29 100.0 36 ............................. TCAAGGGACGCTATTTTCCCTATAGGCTCTTGAATA 37783 29 100.0 37 ............................. ATGTAATGTATATAAGTTTTTAGAAGCCTTTCTATTT 37717 29 100.0 35 ............................. TTGGATGCGGAGGATTTTTCTGTTATCGTAAAAGG 37653 29 100.0 36 ............................. TATTTATTCGTTTAGGCATTATAACACCTTTTCTAT 37588 29 100.0 37 ............................. ACATTAGCACTTGGGTTTAGATCTAAAAAATCTAATG 37522 29 100.0 38 ............................. AATCAAGAAATATGTGAATATGTAAACTGTTATGTTTG 37455 29 100.0 37 ............................. GAAAATATATTAAACATATTAAGAGCCTTCTATTATA 37389 29 100.0 38 ............................. AAAAAGAATTTATATATTTATTTTTCTTTCTATTCTTT 37322 29 100.0 38 ............................. GTCCTTTAAAAATCAAAGTTTGATAGTCTTTTAATTCC 37255 29 100.0 38 ............................. TGTGAATACGAAGATAACGTTAAAGTTGTGGCTTACGG 37188 29 100.0 36 ............................. TTAAAAGCCTGTTCCCATTTAAAATAAATATTATAA 37123 29 100.0 37 ............................. GAGGATTTATTGACTGAGGATGAGCTGGAGGAATATT 37057 29 100.0 36 ............................. ATAAAGGTAGCTTTGCAGAAGTTAAACAGCTAATAG 36992 29 100.0 37 ............................. TAGCTTTTTGAGTCGGCATATTATAGTCTGTACCTTT 36926 29 100.0 38 ............................. TATTTATAACGACATATCCCCTTTTTGTTCGTATGATC 36859 29 100.0 39 ............................. TTAATTAATTCTTTGTATCATATAGCACTTTTTTATTAT 36791 29 100.0 39 ............................. TTGAAAATGACGCTAGAGTTATAGCAAAATTGCTTAATA 36723 29 100.0 37 ............................. ATGGTGATGAACTTGAAAAATTAATAGCTGAATATAA 36657 29 100.0 36 ............................. ATTCTTTCCCTTTTTAGAATACCTATAAGGAATCAA 36592 29 100.0 37 ............................. AATGGAAAGGTTATATACACAGTTGCCCAAGAAGGTT 36526 29 100.0 36 ............................. ACGGATAATGATTTAATGGTTGGTAATCATGGGTAC 36461 29 100.0 35 ............................. TATCAAGTGCCATTTTTTCACTTCCTTTTTCGCAA 36397 29 100.0 37 ............................. ATCCCAAACATTGATTGGTGCAGATAAAATCAAGGAG 36331 29 100.0 35 ............................. TCTAAAATATTCTTCTGAAAAACTGGTTCAAAATT 36267 29 100.0 37 ............................. TGTTTCGAGATGTTCTTCTTGTATAGACAGATATTGT 36201 29 100.0 36 ............................. AGCAAAGCTGAAATTCTTCTTCATACAAATTTTTTA 36136 29 100.0 36 ............................. TAAGAAATATTTGTTCATCTGTAACTTTTTTATTTT 36071 29 100.0 35 ............................. ATGTTTGTCCGCCTTACATATTACATCACAAATAT 36007 29 100.0 36 ............................. TTCTGTATAGTAAATTCAACTTTTCTTCGCAATATT 35942 29 100.0 39 ............................. TCTATATCTAATTACCTGATGATTCTTTTTAGTTCTAGG 35874 29 100.0 37 ............................. TTGCAACCCTTTACTATATCGGAACTGTCTTAAGTTC 35808 29 100.0 39 ............................. TGAAGGTAACTGCTCCTATAGTTGGATTAGGGACTGCAA 35740 29 100.0 36 ............................. ACTAATTCAGATAATTTCATCACTATGTTATGTTCA 35675 29 100.0 37 ............................. GATAGTTGCTATTAATACCCTTCTTCCTGCCTTCTAT 35609 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 70 29 99.6 37 GTTTTATATTAACTATGTGAGATGTAAAT # Left flank : GAACAACTAAATATTCAAAGAGTACTAGCAAAATCTAAATGGGGCTTTATTACTAGAATAATTAATAAAGTATTAGCTCATAATCTTTGTTTCTTTATCAATAAAACGTTAGGTATTAATGTAAATCCAGCTAAAATTAAACAACTTATATTTGGTTAATTATTCCTGAAGCGAACTTGATTTTAGTGGATACTTATACTTATTCTTAATGGAATAATTATCATTTAAATAAAAATTATTCTATTAG # Right flank : TCAAAACTTAAAACAATAACTTTATCTCCCTCCTTTTTTGTTGAACCTCAACATGAGATGTATTTAAATTCAGTTATAGCTAAAACAGGCTCATTATCATTTTGAGTTGAGCCTTAACATGAGATGTACCCATTTTTCAAATTTTTCTGCACTCGGGTTGGGTACTTTGCAGATGGAAGATGAATTGTTACCAATATTCAAAAAATATTATAATTGTGATAATATTTATTTAACTTTTATATTATTTAAAGATTTTGCTAGTCAGTATGCTAGTCTATTTTGCATCATACTGCATCATTAAGTTTCATTGATAGCCCAACTATCAACGAAATCTGTCTCATTGTTTAACAAAAAATTGTACGTCGTATATTTGACTTGTTATTTTCTTTCAAATACCTTATAAACGTAAAAATGAAAAATTCTTTCAAAAACATAAAAGCACTAATGAAACTTTAAATGATTTGAAAATACTTAAAAATATATTTCGAATTTTCTGAATT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGAGATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.77 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 11098-491 **** Predicted by CRISPRDetect 2.4 *** >NZ_LTBA01000026.1 Clostridium tepidiprofundi DSM 19306 CLTE_contig000026, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 11097 29 100.0 37 ............................. TTTATACATTTATCCGTAAGAACTTCTATATTATTTT 11031 29 100.0 37 ............................. AAACGTAAATACATCTAAATTTAATTTCTTCATTAAG 10965 29 100.0 35 ............................. TGTAGGTTGAATATCATCTTGTCCTTTATACTCTG 10901 29 100.0 36 ............................. TACGTTCTTTATCCCAACCCTGTGGTGGAACTAAGA 10836 29 100.0 37 ............................. GTATATCCATTTAAATGCTCATCTCCATCTATACTTT 10770 29 100.0 38 ............................. TATCTACCTTCTCTAAGTAGATATTTCAACCATACATA 10703 29 100.0 37 ............................. TTATATGTACTTAAAAACTTGACTATCTTATCAAACA 10637 29 100.0 37 ............................. TTATAATCACTCCTCCTAGCTATATTCTCATATGTAA 10571 29 100.0 38 ............................. TACTTGTTAGCATGTGTAAGTTATCAAATAGGTTCGAA 10504 29 100.0 36 ............................. TCATCTTCAAATACTTGATTATAGAAATCTAACAAA 10439 29 100.0 37 ............................. TACAGTAATCTTTGATTAAAGTCATTATCATTTGTAT 10373 29 100.0 38 ............................. ATTTGAGAATCTACACCGTAATATTGTGTTTCACATAC 10306 29 100.0 36 ............................. TTCGGAATCTCTTTACAAACTATCTTCATTACCTTA 10241 29 100.0 37 ............................. TACTTGTTGGCACTAACGTGTCGTGATAAGGGTGGTG 10175 29 100.0 35 ............................. AAGAACTTCTTCAGTTAAACTCTCCATCATTTTAG 10111 29 100.0 36 ............................. TTACATTGTTATAAATCTCTATATCATCAGGCTCGA 10046 29 100.0 38 ............................. CATTTATTGCATTACGGCTCAAGTCGTAATGAATTTAT 9979 29 100.0 36 ............................. ATTAAACTTCTTAAATCAATTAAGTCGTCAAACTCC 9914 29 100.0 35 ............................. TTGAGTCCCCGGAATACAGTTATTTGCGTCTATGG 9850 29 100.0 35 ............................. TTTTATCAACCTTCTTTCAATAAATTTCTCAATAA 9786 29 100.0 36 ............................. GTTTGAATGACTTTTTAATATTAAAATCAGGATATA 9721 29 100.0 38 ............................. TTTCCTTGCGTTCTTCTTTTCTTTTCTGTGCATTTTCT 9654 29 100.0 37 ............................. TCAAAAGTTGGTGAATGTGAGGAATTTGGAAAAATTT 9588 29 100.0 37 ............................. TTAAATAATTTTAAAAAACTTTTAATTATTTATTTTA 9522 29 100.0 36 ............................. CCTTTTGAATCTTTTGGTTCTGTATCAACCTTTGGA 9457 29 100.0 37 ............................. TACACCACAAAATCTTCTGCCTTACACTCATACACCC 9391 29 100.0 35 ............................. TAAAATTAAATAAGCCTTACTCCTATTATAAGTAA 9327 29 100.0 35 ............................. CTACTACACATTTATTTAAACTCTCCCCTATTGAC 9263 29 100.0 37 ............................. TTCCTTAAATCCTCTTTGGTAATTTGTTGAACAGCTT 9197 29 100.0 36 ............................. TCTATTTTCATTGAAATTTTTAACTTCAACTATTTT 9132 29 100.0 36 ............................. CTCAAATCTAAATCTTTTAATATAGTACGTTTTTCT 9067 29 100.0 37 ............................. TAGCCACGTGATTCTTTATACGTTGTTTGGTATTTAA 9001 29 100.0 37 ............................. TAATTATTATTATGTAATTTTGTTAGTATACATAATA 8935 29 100.0 37 ............................. TATAATCAGTTATTTCTGTATCTACAATTCCTACTCC 8869 29 100.0 37 ............................. AAATCAGATTGAAACAAAATTATATCATCATTGATAT 8803 29 100.0 38 ............................. TACTTTTTTGACACACAATTTTTTGTTGTGTGTCAAAA 8736 29 100.0 37 ............................. TTTGAAGAAGAAATAAAATTTATTGAAAAATGGGCGA 8670 29 100.0 35 ............................. TTTTATCTTTTATATATCCTTTTAATATAGTATGC 8606 29 100.0 37 ............................. GTCTAAAAGCCTTTCTTTTGATTGATTCATAACTCCT 8540 29 100.0 37 ............................. ATGTGGACTCTCTTTTTATTCCCTTCATTGAAAACAA 8474 29 100.0 39 ............................. ACATACATAATAATCAACTCCTTATATTAATTTATAAAA 8406 29 100.0 37 ............................. ACTCTCGGTATGTCTTTGATAAGTACGTTTAATATCC 8340 29 100.0 37 ............................. TTGTTTACAGGGCTTTAAATTATTCTTCCCTTGTCTA 8274 29 100.0 37 ............................. TTGGATGTTTTATATCCATTGCCTGGAACTCTTCGGT 8208 29 100.0 37 ............................. AAAGTTGAAAATATAGTGTTTGCTTCACCGGTTCCAT 8142 29 100.0 37 ............................. TTGTGCAGAATTTGCAAAATTTAAAAGACCTGATGGA 8076 29 100.0 37 ............................. TCATTCATAATAATTCCTCCTTAATATCTAAAAATAA 8010 29 100.0 38 ............................. ATAATTATAATGCCTAAAAACGAAGCAAGAGTTTTAAA 7943 29 100.0 37 ............................. TCGCTATCCCCTTTTTGTACTATATAATGAAGATAAC 7877 29 100.0 36 ............................. GTATGATTTTTTGTTTCTATATCAAAACCACTTGAC 7812 29 100.0 37 ............................. TTTGTATTTGCCTGACATAATAAATCATACGCTATTT 7746 29 100.0 37 ............................. TCTGCTAAAACCATACCATACAACCAACCAAAATCAC 7680 29 100.0 38 ............................. GTTAGAACCTTTTATATTAAATTGAAAGTAGTTGCCAA 7613 29 100.0 36 ............................. CCTTTCTTTTTTTATTTTACAAATAACATACCAATA 7548 29 100.0 37 ............................. TCTTTTTTATTATTCAACCACAATTCATGTTTTCTTA 7482 29 100.0 36 ............................. ATGACAGAATTAGGCAGGTTTGTTTATTACAGAACT 7417 29 100.0 38 ............................. AAGTTCATCTGTTTGTACAAACATCTTACGCCCATTTG 7350 29 100.0 37 ............................. TTAATCCTGTCATTGTTTTATCTAAAATACCTGTAAC 7284 29 100.0 37 ............................. CTAGACAAAGCAAAGCATTAGCAAACTGACCTCTAAA 7218 29 100.0 37 ............................. AAAGGTGAAAAGTTAAATACTTTTGGTGGGACAGCTA 7152 29 100.0 37 ............................. TTAATTTCGTTTTCTTTTTGTTGCTTTTTAATATTTT 7086 29 100.0 35 ............................. TAAACTTTCAGGTAAATCATCATCAAGGTTTTTAT 7022 29 100.0 37 ............................. TAAAGTCCCACAATTCCTATTATTCCATACAAATGTA 6956 29 100.0 37 ............................. ATATAACAATTTTCTTCAAACATATTTAAATTCTTTG 6890 29 100.0 37 ............................. ATTAAAATATTTTGTACTTAAAAGAAAATCTTTTAAA 6824 29 100.0 36 ............................. ATGTTTGTGCATGACAAAAGATTAAGAGATTATAAA 6759 29 100.0 37 ............................. TTAATTGAAGCTGATTTGGATTTTAACACATGGAATG 6693 29 100.0 36 ............................. TTCTTTTGTTTATTTTTAAAAGTTTAATATCTTTTA 6628 29 100.0 36 ............................. TGTATAATATGTGCTTTTAATTCTTTGACAGGATTT 6563 29 100.0 36 ............................. CTATATTGCGTCAGATTGTTCTGTATTGCATTTTAA 6498 29 100.0 35 ............................. TAATATATATTTATTAACTTGTGTATCTGTACTCC 6434 29 100.0 37 ............................. TATGGTTCAGCATGGGTACGTTCCCTGGATACTTCTA 6368 29 100.0 37 ............................. ACATGACAGCCATAGTAGGAGAAGTAGATGAGTGTAA 6302 29 100.0 36 ............................. CAGATTCAGATACAGAAGTAGGAACTAAGGAAATAG 6237 29 100.0 38 ............................. CTATTAAATCTCCTTCATTACTTGCCATTTTAACTAAT 6170 29 100.0 36 ............................. TTTTTTAGGATTATCAGAAGGACTTTCTTTTTTATT 6105 29 100.0 36 ............................. AAAGCAAACAAGATAGAATTAAAAACAAACAAAAAC 6040 29 100.0 37 ............................. TGTATAATATGTGCTTTTAATTCTTTGACAGGATTTA 5974 29 100.0 37 ............................. TAAACGCGTAATTGTTTTCCAAATTATTTGAAAATTA 5908 29 100.0 36 ............................. TATAAATTAATTCAATATTTACTCCAAATTGTTTGG 5843 29 100.0 35 ............................. GCATTTTACGTTGTTTTCTCTGCTGCGATATCTCT 5779 29 100.0 37 ............................. TCTTGTATGTTTTAACTTTATTAATAGACTCATAAGT 5713 29 100.0 35 ............................. TCTGCTTGAATTAAAGCCACAAAAGAAAGTTGTTT 5649 29 100.0 37 ............................. TTTAATAAAGCATCAGCAATATCCTGTCTAAATTCCT 5583 29 100.0 37 ............................. CCTCTTTTATATATTTGACATGATAATATCATTGAGC 5517 29 100.0 36 ............................. TCAAATTTATTATAAAAGGTTAAATAAGGTGGCACA 5452 29 100.0 36 ............................. CAGGAGTATTTATCCCTACTATAAAATAGTCTTTAA 5387 29 100.0 36 ............................. CATATTTTCTTTTATATAACTTAATAACAGGTTTCC 5322 29 100.0 38 ............................. TTATTTTTATCAATCAAGTAAGGGAGAAGATAGGTTCT 5255 29 100.0 37 ............................. GGGCAACAACGTATACAACTTTGCCGCCAGGCAACTC 5189 29 100.0 37 ............................. TTTTTTATAACTATCGTATTGATTAATTAATACTGCT 5123 29 100.0 36 ............................. ATTTCCATACATCCATTAATATCACGTACAGGTATT 5058 29 100.0 35 ............................. AATATTTTTAGATGCATATTACTATGCAACTGCCC 4994 29 100.0 36 ............................. TAGGTTCTTCATCTTCTTCTACTTCCTCTGCTTCAA 4929 29 100.0 36 ............................. CTTAATTTACTAGCTATTTTAAACAATTCTTCATAT 4864 29 100.0 39 ............................. ACAAACAGAGTGGGAAAGATACAAACAGACCACAGCTAC 4796 29 100.0 36 ............................. TCTTCTATATAGTTACCATTTACATCTTTTATTCTG 4731 29 100.0 38 ............................. TATCTATTAGCTTTAACATGTTATGACATAGGCTCTAA 4664 29 100.0 36 ............................. TATGGTTCAGCATGTGTTTTCTCTCTCGAAATTTCC 4599 29 100.0 36 ............................. TTGTGTTGAATATATAAATTATTTTTAGCATTTATA 4534 29 100.0 37 ............................. CAATAAAAATAAAGGAGCTGGTAAATGAAATAATAAA 4468 29 100.0 37 ............................. ATGGGGTATAGTACTGCAAAATATGATTGAATAACAA 4402 29 100.0 37 ............................. TTGGTTTTTTAAATCCTGTACCTTTTAATTCCTTATT 4336 29 100.0 37 ............................. CTATAACGTGAATATGCTTCATTTAATTTTTCTCCAG 4270 29 100.0 35 ............................. GCGGAAAAATGACAGGGGTATTAAGCGCTACACAA 4206 29 100.0 37 ............................. TTACAATTAAACAACTTCTTAAATCTTCTTCTGACAT 4140 29 100.0 37 ............................. ATGGATTATAAGTCATTAACAGACATAGACAAATTAA 4074 29 100.0 36 ............................. CCCAAAGGGTCCCGGACATTAGCACCTCGGCTAAGA 4009 29 100.0 37 ............................. AAAGATTGAAGAACTTGAACGTAAAAGCAAGAAGTCA 3943 29 100.0 35 ............................. CCCTAAAGACAACTCGATGACCAAAAGTTAGTGTA 3879 29 100.0 38 ............................. TCGAAAGTTGGTGAATGTGAGGAATTTGGAAATATTTA 3812 29 100.0 36 ............................. ACTTTCGATGGATTAAACTCTATTCTAACCATTTCA 3747 29 100.0 36 ............................. TTCATATTTTATACAAAAAGCAGGAGATGCTCAGCG 3682 29 100.0 36 ............................. ATCATAGTACCCATAATTGTGATACCGACTGGTAAA 3617 29 100.0 36 ............................. CAAAAGGAGTATAAAACTCTTCTGTGAAATCTTGTT 3552 29 100.0 36 ............................. TAATTTTATGTATTTCTTGTTCACTTTGCAAATAAC 3487 29 100.0 36 ............................. TGGCAATTGTTAAACGAGATGATGAGAGGTTGTAGA 3422 29 100.0 37 ............................. CTTACATTGTTTGGTTGTCTTACTATTGTTAGAGTTA 3356 29 100.0 36 ............................. ACTTGTTTAGTAGGTTCCCAGGAACCATTCGTAAAA 3291 29 100.0 36 ............................. ACGTAAACAATAGGACATTTGAAATTCAATAGAATC 3226 29 100.0 36 ............................. ATTTAAAGTTGACATTTTATATTCTTAGTGTTATAC 3161 29 100.0 38 ............................. ATTGCATAATGATAATAGGGACAAAAAAGAGTTGCCGG 3094 29 100.0 37 ............................. TTTTTTCTTTCTTCAAGAATTGTATCAACTAGCTTTT 3028 29 100.0 39 ............................. ACGCATATTTCCTCGTAGCTTTATTTCACTAGAACCTGT 2960 29 100.0 36 ............................. AGGGTCGGAACAATCTTCCGAACCTTTTCATCATCC 2895 29 100.0 37 ............................. TTAGACTGCATAACTAGAGTAGGATTGGACAAATATA 2829 29 100.0 36 ............................. TTCTTTTTTAATTCCTCATCATAAGCATCAATTTCA 2764 29 100.0 36 ............................. TTCTTTTTTAATTCCTCATCATAAGCATCAATTTCA 2699 29 100.0 37 ............................. TCATTTTCTTTTCTTTGTTAGTAACAGTTTTTAAACA 2633 29 100.0 37 ............................. TGTTTAAAAAATCATCTTTATTCATAATACATAACGT 2567 29 100.0 39 ............................. ATGGAAGGCAAGATTCAATGAAGAATATTCACCCAACAT 2499 29 100.0 35 ............................. TTTGTTAAACTGGAATATATTATTCCTGCTAATCT 2435 29 100.0 38 ............................. TTTATAGGAGCTCTTGTTATTTCTAATCAATGCTCAAG 2368 29 100.0 35 ............................. AAAACATGATATGTGATACCTGCTTGGTTCAAAAG 2304 29 100.0 36 ............................. CGCAAAAATATTTTCTAAAATTCAACCAAAAGTTAA 2239 29 100.0 38 ............................. TCTATAATCATATAATCACCCTCTCTTTGAATACTCAA 2172 29 100.0 37 ............................. CTAAGCATGAAATAGAACATGTCAACATTATAGAATA 2106 29 100.0 37 ............................. TCGTGAGAAAGCGAATAACAAAGACAAGGTGAATCAG 2040 29 100.0 37 ............................. AAGATTACCATATACAAAAAAAATTGATTGTTAAGAT 1974 29 100.0 38 ............................. CACGCAATAAAACCTTGGGGGACTAGCCCCCCAAACCC 1907 29 100.0 37 ............................. TAGGATGTTTTATATTCATAGCCTGAAATTCTTCGGT 1841 29 100.0 36 ............................. TGTCGATATAGTAACAAAATTGCTTGTTACACTAAA 1776 29 100.0 37 ............................. CAAATTATTGCTATTTTGGAGGCTTGGTTGGTTGCTA 1710 29 100.0 36 ............................. TTGCAGCAAACTATGCAATCATCTTTAACATCAATT 1645 29 100.0 38 ............................. ACAAGTTTTGTTATGCAGGACATTGGAAAGTATGTTTA 1578 29 100.0 36 ............................. ATTGAATTAGTTGGATTGCTTGAAGACGTAGAAAAA 1513 29 100.0 37 ............................. TGGATTTACTTGTCGAAGACAGAAGGGCGGGCAGTTG 1447 29 100.0 37 ............................. ATTCTGTGCAGATGTACCTTTTGCCATTTCGAAATGA 1381 29 100.0 39 ............................. TTTTTAAAAAAGAGGGCATAAAAAATACACCCTCTAGGT 1313 29 100.0 37 ............................. TCTTTCTCACCTCCTTACGCACTCTTTTCTAAAAATT 1247 29 100.0 38 ............................. ATTAAACTATTTTTATTGTTTTTATCTGTAAATTGCAT 1180 29 100.0 39 ............................. AGGGTTGGACATTAGATGAAATGATAGACATAGTTACAA 1112 29 100.0 37 ............................. TTTAATTGGTCTTTTATACTGTTAAACCACACAGTAA 1046 29 100.0 37 ............................. GTTTTTGGGGAAATTGAACCAAAAGAACTTGTTGAGT 980 29 100.0 36 ............................. GTCCATCTTTAGGTTTAAAGTGAGGCAAAGGGAATA 915 29 100.0 37 ............................. AGTAGCTCTATAACAATATCTGATACAAATTGATGTA 849 29 100.0 37 ............................. TACCTATTAGCTTTAACATGTTATGACATAGGCTCTA 783 29 100.0 36 ............................. TTTAGCATACTATTTAAACTATTTAATTTAGTCTTT 718 29 100.0 36 ............................. TAGGCATACACTCATTTGATATAGCTTTTGCAAAAG 653 29 100.0 39 ............................. TTGGATGTTTTACATCCATTTCAGGATTTTCGGAATCCT 585 29 100.0 37 ............................. AAATGATGATACTGAATATGATGAGCTAACTCATGAC 519 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 162 29 100.0 37 GTTTTATATTAACTATGTGAGATGTAAAT # Left flank : TTTATTGGTTTATGCAATAAAATTTATGATATAATGGAGCTGATGATATGTTTGTGATATTAACTTATGATATTGAAGAAAAAAGAATAAATAGGGTCAGAAAACTATTGAAAAAATATTTAACGTGGACTCAAAATTCTGTTTTTGAAGGAGAAATAACTGAAGGAAAATTACACAAGTGCTTATCTGAGATTGATAAGCTTGTAGATAAGAAAACGGATTCAATTTACGTATATAGAGTAAAGATATCTAAAAATATCAAGAAAGATGTTATTGGAATAGAAAAGAGTTTTGATGAACTTTTTCTGTAAAGAAACTGCAGTGAAGCAAACATATATTCTAAATAATCAAAGACATTGATATGTCTATGATTTCAATCAAAATATAAATAATTAGCAGAACACTACTGATGGTTTGCTGCAAAATTGCACTATTTAGCAATTTCAATAATCCGCTAAACATTAGTAATATCAACGGATCTGAAGAGTTTATTTTTTAGG # Right flank : TACACAAAATTATTAATACAAATAGTGGTGGACATAAGGTTTTATATTAACTAACCCGTTGTGCTAGTTAAAATCTATAACAATAATTACAACTAAAAAAACTCCAGCATTTATGTTAACCTATCAATGAAAACACCACTAGTCAAAGATAGGGGGAAACATATATGCTAGAGCTTAATAAAAATTCTATCACAACAATAAACAATTTAAAAGATTTTATTACTGTTGTTTTTGTTATTATTGATGATATTTACCATGAAATAACTCCAGCACATATTAAATTTCGTAGAAATATTGATAAAGCCATTATGAGCGATAGCGAAATAATCACAATTTCCATAGTAGGTGAACTCTTAACTATTGATTCTGAGAAAGCTTGGTTTGGATTCTGTTCAAAAAATTTAATAGATTTATTCCCTAAGTTCTGTACAAGAACAAGATTTCATAGAATTAGAAAATCACTGTTTAAAGTTATGGAACAAATCCGTAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGAGATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //