Array 1 255981-257665 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSTR01000001.1 Streptococcus ilei strain OM06-9 OM06-9.Scaf1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 255981 36 100.0 30 .................................... CTTCTTTAAACTTCGCGACCTTATTCGAAA 256047 36 100.0 30 .................................... CAACTTGCCTTGGTATGCTCAAGCGACACG 256113 36 100.0 31 .................................... TTGTGCTCATTCATATAACTTGCTGAGATAT 256180 36 100.0 30 .................................... CCAGTAGTATTGACACCTACAACACGCTTG 256246 36 100.0 30 .................................... TTGTATCCACTACTGGTACTTTAGATTTAG 256312 36 100.0 30 .................................... TGGTTTTATTTCCCGGTTGATGGTCAACCG 256378 36 100.0 30 .................................... TGACCTTCTTCAATCGCTTGTTTTGGGTTT 256444 36 100.0 30 .................................... TGTTTTCGCCTTGGTTGAATACTTCGTCTT 256510 36 100.0 30 .................................... GAACCTGGACGATGGTGTCTTTGTTGATAA 256576 36 100.0 29 .................................... ATATCGTCCATGTCTGGGATAGGCCCGCT 256641 36 100.0 30 .................................... TCTTTCTTGGCATTTATAATAGTTTGACGG 256707 36 100.0 30 .................................... TCTTTCTTGGCATTTATAATAGTTTGACGG 256773 36 100.0 30 .................................... TCTTTCTTGGCATTTATAATAGTTTGACGG 256839 36 100.0 30 .................................... TATTGGGTCTAAAATTGGTATGATTACCAA 256905 36 100.0 29 .................................... GTCATGGTCCAAGTAAATCAAGCCTTCAC 256970 36 100.0 30 .................................... ACAGCCAGATCAACAATTATTTGACGAGAT 257036 36 100.0 30 .................................... TCTGCAGGGACTGGACAATATCTAAATGAA 257102 36 100.0 29 .................................... TAACGTATAGCGGAGGTTGAAGGCAAGCT 257167 36 100.0 30 .................................... TTTAACGTAGCTGAAAGCGGATGGGAAAGC 257233 36 100.0 31 .................................... CTAAAGGCTTCGGAGACTTTGAAGCATCACT 257300 36 100.0 30 .................................... CAAGCGATAGTCAACCAGACCCTATCACGG 257366 36 100.0 30 .................................... CGTCAACTGTAAATTGATTACCGTACATGT 257432 36 100.0 30 .................................... AGGACGCAAGCTACACGTATCTCCAGAGTT 257498 36 100.0 30 .................................... TTTACAGCCGGACAAGAAATTAAGGCCGGA 257564 36 100.0 30 .................................... TCGCATAGACAATATAACGAGTACTGTCGA 257630 36 94.4 0 ....C......................G........ | ========== ====== ====== ====== ==================================== =============================== ================== 26 36 99.8 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GATGATTATTTATCTTATAAGGAATTTGTTGAGTGTTGTGAACAATTAGAGAGATTAACTAATTATTGTAACATGTTATACACTATTTCATTTCCTTCAAATGAAGGTTATCTTCATGTCACGAAAGAAGTATTAGAGGAGATTAATATTGTCTCTGATTACATTGATCATTTTTATTCATTAGAATTTATGTATGAACGTTTTACTGATCAATATCCAATAAATCAAATACCTAGTAAACAAGAGTTTTTATCATCTTTAAGGAAGATTGGGCCTTATTTATTTAGTTCTGATATTCTTCATATGAGCTTATCAATTGAGGATCAAGTAGCATTGAGAATATTAAACAATTTGTACCAGTATGAAATGAAAATAAAATTCCATATTGAACCAGTCAACCCAATGTTATTGAAGTATTTAGAAGAATAGTATTGACGAGTTATGTCTAAGACTTTATAATGGTTTTTGAGAGGACAAAAATCAAAATTGACGAATTTGAG # Right flank : CTGAATGCGAGGGAATGGAAGTTGAGGAGGTTGAGTTAGTTTTAGAGCTGTGTTGTTTCGAATGGTCCCAAAACTATTATTTGTATGATATAACAGAATATTTAAAAAAATGAAGGGGTTTTCTATGGAGAGTGATGTGTTTTTTGATTATTTTTTAAGATCACTTAGGTTTTATTTTCGTGATAGGTGTAAGGATATTGGATTTATAAAGTTTTTTAAAGATGAAAATAATTGTTTTATTACTATAGAGGATTATGTTTTGGAATCATTTGTAGTATTGTCAAATATTTTGAGTAAGGATAGGATTGTGTTTACTTGTGGAATTATTTATAGTAAGGGGGTAGTTACTGGAGTAGAAGTATATATGAATGTATTAGAGTTAGAAAGATTAAATAAATTGTATAAGATATAGTTTTGATGAATATTAAAAAACATAAGGGTATTTATCTACGTGGGATGTGTGGAGTGATAGGATTAATGTTTCCTAGTTATAGAACTCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //