Array 1 15193-15426 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPML01000068.1 Paracoccus versutus strain MAL 1HM19 NODE_68_length_15347_cov_70.581413, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 15193 36 100.0 30 .................................... TCAGCGCGACGCCGGCGACATCCCCAGCGC 15259 36 100.0 30 .................................... TCGACCCGTGGGCGGGCGTGCAGGAAATCA 15325 36 100.0 30 .................................... AACATCCGCGGCCGTCCCAGGTCGAGCCGG 15391 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 100.0 30 GTTGCGGTTGGCCTGCGGTTTCTGAAGCGCTAACCT # Left flank : TGCCCGAATCTCATCCCCCGCCAGCGGCTGGCTGGTGGACAGCCCATGCTTCAGCCGCTGCACCCAGAGCCGGCCCGAGGCCAGATCGAGATCCGTCCGCCGCAGGGCGATCAGCTCGCTGACCCGCAGCCCGTGCCGGTACATCAGCAACAGCATGAGATGATCGCGCGCACCGTGTCGGCCGGACCTGGCCGCAGCCAGCAGGCGCTTGACCTCATCGGGGGTCAGGTAATCTCGGCGGCGCCGATGCGCATCCACCGGCGCGCTGCCGTCACTCTTAACAAAATGCTGGTCGGTGCGCTATCGGGTCATCTGATTTTGCCCTGCGATTTCTGGTCCTGACTCTATCCACTCTTTACAAAACGGGCATTCTGTAAAGAGTTTGCTGTGGGTTACGACGTCGCTTCCGGCCCATACTAGCCGGTCGTGGTACCGTTGTGCTGCAAAACAGTATTCGCCAAAGCGGACATTCGTCATTCGCAAACTGAAAGCGGGTATCA # Right flank : C # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGTTGGCCTGCGGTTTCTGAAGCGCTAACCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 19214-19975 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPML01000179.1 Paracoccus versutus strain MAL 1HM19 NODE_209_length_19895_cov_68.408943, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 19214 36 100.0 30 .................................... CATATTGCTGGCCGAGGCGAAGCTCGACAG 19280 36 100.0 30 .................................... CGGCTATGCCGAGCCTTACATGAGCGACCA 19346 36 100.0 30 .................................... ACCCATATCACGCGCCCGCCAGGTGCTTGT 19412 36 100.0 30 .................................... GCGCAGCCTGCATTCCGCACAGTGCATCTC 19478 36 100.0 30 .................................... TATCCCAATTCTGCGCATAACATCGGCGAA 19544 36 100.0 30 .................................... CAGTTCCTTCATGAGCGCTTCGTCGGCCGC 19610 36 100.0 30 .................................... TGCTGCTGAGGCGCTTGGCGTGCGGAGGGG 19676 36 100.0 30 .................................... AGCGCCTGGGCGATCAATCGACCTGGGAGC 19742 36 100.0 30 .................................... AAGGACGGCACACTGGAACTCGGCCGCGAC 19808 36 100.0 30 .................................... CATCAGGATGTCGGCGGCGTCGTGATTTTC 19874 36 100.0 30 .................................... AAGATCGAACACGACCCGCGCTATGTCGGC 19940 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 100.0 30 AGGTTAGCGCTTCAGAAACCGCAGGCCAACCGCAAC # Left flank : ACCGGCCGCCCCGATCTCCTGCTGTTCGACCCGCCCGGCGCGCTCGACTGGGCCGCGCTCGGCCGCGGCGAGGGGGACGGCGCGTGAAGAAGGACCCGTCATATCTGAGCGGATACAGGCTGATGTGGATTTTCGTGATGTTCGACCTGCCGGTGGGCAGCAAGAAGGAGATGCGGGACGCCACGAAGTTCCGCGAGTTTCTGCTGGATCAGGGTTTCGAGATGAGCCAGTTCTCGATCTACGCCCGGTTCTGCAACGGCAAGGACAGCTATGAGTCGCATCTGAAGCGGATCGAGGGTAACCTGCCGGAGAAAGGCGAGATCCATGTGCTCACGTTCACCGACAAGCAGTATGAGGGAATCGTCCGATTCTCCAGCCAGCGCCGCCGCAAGCCCCGCGAAAACCCGGATCAGCTGGCGCTGTTCTAGTTATGTCCAGGATTTGGCATCGCCTGGATGTGCCGACTCCTTGTTTTTAATCAACAAGTTGCCAACACATCC # Right flank : | # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGGTTAGCGCTTCAGAAACCGCAGGCCAACCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA //