Array 1 2723979-2723367 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013114.1 Staphylococcus equorum strain KS1039 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 2723978 36 100.0 36 .................................... TTGAGTAAATTACTTTCATGATTTTCATATACTTCT 2723906 36 100.0 37 .................................... ATAAACCTACATGACAATCATTTTCTAAATTGTAATA 2723833 36 100.0 36 .................................... AGTAATTCACCTATAACAAAACCTAATATAAATGTA 2723761 36 100.0 35 .................................... TTTTTAACGTTTGTTACTTGATAATAGCCCGTTGC 2723690 36 100.0 36 .................................... TTTACGCCCGTTGTTTCTGTTTCCATAGTTTTTAAT 2723618 36 100.0 37 .................................... AGTTTTGAAATGCTTAATACTTTTGTCTCTGAAACGT 2723545 36 100.0 37 .................................... AAGGCTACACGATGAACACTCACAAGGTTAAAACCGT 2723472 36 100.0 34 .................................... ATAATAATTCTTGGTTCTTTCAGTTTATTAATTT 2723402 36 97.2 0 .................................T.. | ========== ====== ====== ====== ==================================== ===================================== ================== 9 36 99.7 36 AATCGACAACCACCCCGTAAAAGAGGGGACGAGAAC # Left flank : TCTTTTAAATATCAGAGTAGTTACATGATTTTTCCTGAGGTTAAACGTTTCTTTAGAAGTATTATGATACAATTTGATGCTTTTTTTGAAGAATATAAAATGTACGATAAAGAAACATTAGATTTTTTGGAAAAAAACATTAATATTGTTGACTATAAATTGAAAAGTACACGATTTAACTTAGAAAAAGTTAAAATCCCTTCATTTACAGGAGAAATAGTGTTTAAAATTAAAGGACCCTTACCTTTTCTACAACTAACTCATTTTTTATTGAAGTTTGGTGAATTTTCTGGATCAGGTATGAAAACAAGCTTAGGCATGGGGAAATATAGTATAATATAACTAGAATATAGCTGAAATTTAGTTGTCAAAAAATGTGACATTCTGCACTTATAGTACAAGTGATTTGTCGCTATTTTTGACAGCAAATTTTGCCTTTGAACTATTGATGTGATAGGCTTTAAAGAGCTATCTATTCGATAACTACCCCGGAGAACAGG # Right flank : CTCATCTTGATGATCTCAATTGGCTTGGTTCAAAAGAAATCGATAACCTCCGTAGAATAGAGAATAAGTATTAAAAATATATTTGATTTGACAAAATATTCTGCAAAAAAAGGGAACAAAAAATCAAGATTTAAACTGTAATTCATTATCTTTGCAATTAATTGACATTCATTTCTAAATAAGCAGAAACAAAATAACGTTCATACAAATAATTTCTTTATGATTAAGTTAGAATTAGAAAATCAATGCGAAATACGAATAACAGCGAATGGAACGTATATTATTGAGAGATTGGATGCAGTGTATTGCAATTCGAGAGTTGCTACTTAAGAAATTAAAAAGAAGAAAAACAATCTAACGAACATCAAAAAAATGTAAAATCGAATGAGCAAACGAAAGAGCCATCTGCCAATGATAAACAGAACTCTGGCACAACAGAAGAAAATAACAATGATAAAAATACTGAGAATAATAAAAAATCAAGTCAAAAACAAAAAAAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCGACAACCACCCCGTAAAAGAGGGGACGAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,15] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.30,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 2 2733194-2732729 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013114.1 Staphylococcus equorum strain KS1039 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 2733193 36 100.0 35 .................................... GTTATCAATTTGGTTATTATGAAAATTAGTATTAT 2733122 36 100.0 36 .................................... TGTACCATTAATTTTTATGCTTACCGCTTCTTGATT 2733050 36 100.0 36 .................................... TCATGTTCTAAATCTATATTGTAATCAAGTTTATTC 2732978 36 100.0 36 .................................... TTAAGTTCGTTCAGCATCTCGACCATTTTATATAAA 2732906 36 100.0 36 .................................... CGCTACCCACTACTAAACTACTCAACATTTTTTTAA 2732834 36 100.0 35 .................................... CTAATAAGTTTTCTATAGTTTTGATAAATTTCATT 2732763 35 91.7 0 ..............................-...GT | ========== ====== ====== ====== ==================================== ==================================== ================== 7 36 98.8 36 GATCGACAACTACCCCGAAGAATAGGGGACGAGAAC # Left flank : TTGATTAATCGATTTAATAATTCTAACGCAACATTTTTTTGTTTCAGTCATTCGACATCTTTTAAAAAGTCATCAGACAGGATTGGTAAATCGGGTTGTTCAAGGCCTAGAGTTTAATAAGTGTCAAGTCAATGAAATCTTCAGTTAATAGCGTATATTTGATTATTATTAGTTTAAACATATTAAAATTAAATACTTATTATATATGGCTTTTTTATTATTTTAATATAGAAGTATATTTTACTTTCCTGAACAGTAGTTATTAAATTTATCTTTTATTTTAAATTAGAAAGGAAGAAAAAGTTAAATTTATATTAAGTTTTATATATGATTAATTATTAACGTATTAAATGTAGTATACTTTTAATATAAGGAAAATCATCATAATATTTGTCAAAAAAAGTGACATTTTATATAATAGCATGGTGTTAGTTGTCACAATTTTTGACAGCAAAAATAATAATTGAACCCTTGTGGTTATGCTAATTATTAAAGTATCG # Right flank : GTAAATTTAATAACACTTTAAAAAATTGTAAATTTTTAATGAAAAACGTATTGATTAATTTTTAGGGGTTGAAAAATGAAAGATGTTATTTATGTAGAAAATCATTACTTTGTTACTGTGAAAGAAAATAGTATTAAATTTAGAAATGTAATAGATAAAAGTGAGAAATTTTACTTATTTGAAGAAATAGAAGCAATTATTTTTGATCATTATAAAAGTTATTTTTCTCATAAGTTAGTAATTAAATGTATTGAAAATAATATTGCTATTATTTTTTGTGATAAAAAACATTCTCCATTAACGCAACTTATTTCTTCTTATGGTATGACTCATCGTCTTCAAAGGATTCAAAGTCAGTTTCAATTATCTGGGAGAACTAGAGATAGAATTTGGAAAAAGATTGTTGTAAATAAAATTATTAATCAATCAAAATGTTTAGAAAACAATTTACATAATGAGAATGTGAAGTTATTAGTAAACTTAGCAAAAGATGTTAGTTC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCGACAACTACCCCGAAGAATAGGGGACGAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,14] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA //