Array 1 41966-42413 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCUV01000075.1 Vibrio sp. 10N.286.49.B3 10N.286.49.B3_contig_9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 41966 28 100.0 32 ............................ TGTAAGATCGCGTCGTGACTTCACCTGTGACC 42026 28 100.0 32 ............................ ACCTTGTGTCTTACCCCAAGCTGTTGCTAAGG 42086 28 100.0 32 ............................ TCATGGCTTGCTGAAAATTCAGAATACTTTCA 42146 28 100.0 32 ............................ CCCTGGTGCAGGATTACCTAGAGGCGTGATCA 42206 28 100.0 32 ............................ TCGATGGCTTTTTTGTAGGCGTCAGGATCTAC 42266 28 100.0 32 ............................ TTTTTCGCCCTAATTTCAAATGTATAACCATA 42326 28 100.0 32 ............................ ATTCCGTAATGCTCGTGCAATTTAAGGGAAGG 42386 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 8 28 100.0 32 GTTCTCTGCCACATAGGCAGCTTAGAAA # Left flank : TAAAACCTGTACCTGAAAATGTATCGCATGTTTGTTTCATTCGACAGCAAGTTAAAGGCTTAATCGGTGTTGAGAAGAAGATGCAAGCTAAGGCTGAATACTTATCTAGTAAATTTGATAAACCGATTAATGAATGTTTGAAGTCACTGGAAAAAAGCAAGCCTAAAGCAAATAGAGATGAAGCCAAATTACCTTTTATTTGGTTAGAAAGCCAAGAAACTAAACAGCGTAATTTAGGTGGAAGTCAAAAGTTTCCATTATTTATTAAAAGAGTTGAAGTTGTAGATCGGCAGGTGGGTGTATTTAATTGTTACGGTTTGAGTGCAAACGATAACAAAGCAGGACTGTTTGCAAGTATTCCCCAGTTTTAACCTTTAATTTTGCTCTTTAACAAATCAAAAAATAAAACAATAGGTTACGACAGTGCTAGAAAGTTTGGTAAAAAGGGCTAATTTTACCTAGCTATCTGTTGTAACTTATTTTTTGCTTGTTATTCTAGT # Right flank : AAAGTTCACAGAGTGGCAAAGCGGGCGTTTTTGGTTCTCTGCCACATAGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCTGCCACATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 43190-45018 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCUV01000075.1 Vibrio sp. 10N.286.49.B3 10N.286.49.B3_contig_9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 43190 28 100.0 32 ............................ TCTGTGATCAGCCCTTTTGCTGCTCTATCTTT 43250 28 100.0 32 ............................ ATTTGCAATTCTTGCTCGATACCAACATGATC 43310 28 100.0 32 ............................ ATTCCCAAATATTCCCGACCAAATCATGCACA 43370 28 100.0 32 ............................ ATTCTAGCTCTCCACTCATCACCACGCGCCCA 43430 28 100.0 32 ............................ TCGATCTTATCTAGCCACTTTTGTCTGAACAA 43490 28 100.0 32 ............................ ATCGATCAAGGCTGGCAATGTGGTTTCTGTGG 43550 28 100.0 32 ............................ TGCCCTGTTTCTGTCGTGCCGTCCAGTGATTT 43610 28 100.0 32 ............................ ATTTAAAACACCACCAACTTCCCATAGCGCAA 43670 28 100.0 32 ............................ TCGACAACTCCCATCGTTGGGTAGTATTTACC 43730 28 100.0 32 ............................ GCCCAAAAAGCCGCTCATTCGCCCGAGCGGCT 43790 28 100.0 32 ............................ GCTTTCTTTGAGGAGTAATTATGTACATATTT 43850 28 100.0 32 ............................ CAAGTGATCCCCTCAGAAATCCAGAAAAATTC 43910 28 100.0 32 ............................ AGAAATGACTGAGCAACCCCCATTATCTCCAC 43970 28 100.0 32 ............................ TATTTCGACTCAGTCGACACGATAACATTATC 44030 28 100.0 32 ............................ CGCAAGTGTGGGTTAGAGCTGAAGAACTAGAG 44090 28 100.0 32 ............................ GCCAATGCCGATTTGCCCTTTTCGCCCAACTG 44150 28 100.0 32 ............................ TGTTGCTGCCGCGCCTTTCACTTCTAGTGCCA 44210 28 100.0 32 ............................ ATCATGAACGACCAGCATTCATCAAAGCCATA 44270 28 100.0 32 ............................ AGTACGGAATCGACGTTACATCTCCCTCACCA 44330 28 100.0 33 ............................ CGCAGTCGCTGCGAGCGGTGCCGCTCACATCGC 44391 28 100.0 33 ............................ CGCCAGCACGTAACTATGATGTGACGCTTGGCG 44452 28 92.9 32 ..........G..C.............. AATCTAAATTCAATCAATCGCTCGGTATCTTC 44512 28 89.3 32 ....A.....G..C.............. ATTGAGTAAGATTTTGTGGGCGAATCAGCGAA 44572 28 89.3 32 ....A.....G..C.............. GAGCCAATCCCCCGTTGGCGTGTAGTTTTTCG 44632 28 100.0 32 ............................ CCAGACGTTAAGACCTTGATTTGCTTGGTTTT 44692 28 96.4 32 ...................A........ GGACGTGTCGAACATTATCTCAACTGATGATA 44752 28 100.0 32 ............................ ACCTCCCCGGTCGACAAGTCAGGCTCTGCAAT 44812 28 100.0 32 ............................ ATCCGTCGCCCTTAGCTTTACATAGAGCGAGC 44872 28 100.0 32 ............................ TTGCGTTCATGGAATGTACTCAGATGCCATCC 44932 28 100.0 32 ............................ TGAAAAAACGTACGACGAATGGCCCGCTCTGG 44992 27 89.3 0 .......................-T..T | ========== ====== ====== ====== ============================ ================================= ================== 31 28 98.6 32 GTTCTCTGCCACATAGGCAGCTTAGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTT # Right flank : TAGCTTAATTATAGGAATAGGGGATATCTACATAACAAAACAGCTTACGAGAAAGGTTTTATTGCGATATTTTATTCTGAACGTGGGAGGGTGGTTACTTTCTTGTTTATAATGGGAATAAACTGACAGTCACCGCTTGAAGGTGGAGACTGCCAGTTTTGATTAGAGCATTTTTGATTGGAATATTGCTTTAAGAGTTACTCTTCAACATTGCTGTAAGTCGTTTGGTCCATAAACTCAATGATACGGAAATCTTGGGTATTTAACTGTCTCATTAAATCAACCATTTCGTGATACGGATTATGCTTCAAATCAACAATGCCTTTATTGGCCGTATCAGCGCCAGTTGTATGATCGTCATCGCGATAAGAGAACCAATGCCAACCTACCGATGAACCGTTATACATCCAACTAAGCACAATGTTTTGGTAAAAGTGGCCTCTTGCTTCTTGAGTCCATACCGTTTGACCTGCTCCTGGTACATTCGAGTGGATTTCTGT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCTGCCACATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [5.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //