Array 1 67260-70029 **** Predicted by CRISPRDetect 2.4 *** >NZ_QOVB01000006.1 Lactobacillus delbrueckii subsp. bulgaricus strain MBT 92059 NODE_6_length_87116_cov_142.093, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================================================================================================================================== ================== 67260 28 100.0 33 ............................ TTGAAGACCCAAGAGTAAGACAGCTATTGGAAA 67321 28 100.0 33 ............................ CTTCATTTTCTTAGGCTTTCCTATTGGGTAGGT 67382 28 100.0 33 ............................ TGCAAGCCTTTGGCAAGCCTTTTTTATATTTTT 67443 28 100.0 33 ............................ TTATGAACAACTGTTTGCATGGTTAGCCTATGT 67504 28 100.0 33 ............................ TATCTATTTGACGAACAACATCGATATTTTCGG 67565 28 100.0 33 ............................ TCATCAGAGCAGGCCTCTACAACTATGAGGTTG 67626 28 100.0 33 ............................ TAATAATGCTGTTGGTCAACGGGGAGTAGCCTA 67687 28 100.0 33 ............................ TGACTCCTTCTTTTTCTTCTTCGGTCAAGTCGA 67748 28 100.0 33 ............................ CATGTTTCCGTTGGAAATACAAGACTTTTTAGA 67809 28 100.0 33 ............................ TCATCGCTTTCCTAGACAAACCGCACTGCACTA 67870 28 100.0 33 ............................ CAGGGTGGTGAACTTGCGCACTTCGATCACACA 67931 28 100.0 33 ............................ TGGAAAGCGAAGCGTTCGCCGAAGAGCTAAAGG 67992 28 100.0 33 ............................ CACCTTTCCGTCGGTAGTGCAAGCCTTTGGCAA 68053 28 100.0 33 ............................ TCTTTGCTTGAAGATTATCCACACTATGATGAA 68114 28 100.0 33 ............................ CGATGAGGAGGTCCGGGACGAAATTGCGGCCGC 68175 28 100.0 33 ............................ CCCGGCCGCACGGGGCTACGGAATTATTACAGA 68236 28 100.0 33 ............................ TAAAAGACTTCACAGAACTGTATCTTCTTGCAC 68297 28 100.0 33 ............................ CCCGTCCCAAATGAATTCGCCAATTTCACGCGT 68358 28 100.0 34 ............................ TTTAAAGACTACGTTACCCGCGAAATTGGAAACT 68420 28 100.0 33 ............................ CCACGGGGACGACTTCGGGGAATGGACTTCAGA 68481 28 100.0 33 ............................ CGAGTATAATTAAGAGCGTAAGGAAAAAGCCCA 68542 28 100.0 33 ............................ TTCGGGAGCTGGTAGCAGAGCGACATAAGCTTC 68603 28 100.0 33 ............................ TGATGAAGTATTGGATTTCTGCCAATTAGAAAA 68664 28 100.0 33 ............................ CAATCTGCCCATTAACTACCTGCGCAATGGTCG 68725 28 100.0 33 ............................ TCGCCGTCTGAGAAGCCATCGCCATTCATTTCA 68786 28 100.0 33 ............................ TGACTGGCTATCCTCTCTGGTTGGTCCTAAAGG 68847 28 100.0 33 ............................ TTAACCAGCAACAGAAGGCCCAGGCGGCCGTTA 68908 28 100.0 33 ............................ TACTTAGGTAAGCCTATTGAAGGGCCTGTTAAA 68969 28 100.0 33 ............................ CTGGAAGCTGGAAGCATGATCCAGTTGGAACTG 69030 28 100.0 33 ............................ CATGCTTTAAGTTTGATAAAGGCATCGATTACT 69091 28 100.0 33 ............................ TGGGCAGATTGTTGCGGCGATTAATACGAATTC 69152 28 100.0 33 ............................ CTATGACATGCACGATTATCGCATGCTTTACTG 69213 28 100.0 33 ............................ TCAAAGCCGTACTGCGTCAAATCAATCCGATAA 69274 28 100.0 33 ............................ CCACGGCGACGACTTCGGCAACTGGACTTCGGA 69335 28 100.0 33 ............................ TAATGACTACTGAACAAGAATTTAAGAAAAACT 69396 28 100.0 33 ............................ TTAAGATCCCCAGCAAGTAAGATTTTTAGATAA 69457 28 100.0 33 ............................ TTTTCTTGCGCATGAGAGAGCTGACACTCCAGG 69518 28 100.0 33 ............................ TAAACGCCGGGCGCAAAATTCCCTATAGCGTCA 69579 28 100.0 33 ............................ TGAGCCAACCTACGCAAAGTCCGGACTGACTGG 69640 28 100.0 33 ............................ TTTCTGCTATGAATCCGGTTTGACCGACTAAAA 69701 28 100.0 33 ............................ CTTACGGTAGATCAGACGATACTGACAGCCAGG 69762 28 96.4 33 ..................A......... TGTTCTTGCCCAGAATGATAAACTCCTGCCCGA 69823 28 100.0 150 ............................ TGGGGGGCGTAGTACACCCCACTGTTATAGATCTATTTTACTTAATCGGCTGTGATCTCACTGCCATTAGTGAGTAACATGGGGCGAAACAATATTCCTCACGTATGTGAGGAGAATTCTTTCTTTATGCTATTGTGTTTTTCGTACTGT 70001 28 78.6 0 ...........AT.T.C....A.....A | T [70007] ========== ====== ====== ====== ============================ ====================================================================================================================================================== ================== 44 28 99.4 36 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGACTGAATACCGAAACTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATCACTTCTGAAATGCTAAGTAAGGAATGCGTTCCATTGCAAGATGCATTGGAAGAACTGACTGACTTTGTTGGAAATGTACCAATTGTTGGGTACAATTTTAGATTTGATTCTGCATTTTTGAATAGGGATTATCGGAAATGCGGGATGCAAGAATTGAAAAATGAGATCAAGGATTTACTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAATAAGGTGCCGCATAACGCTGTGTCTGATGCGAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTCTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : ATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGATAGAGTAGAGGTAATAGAGAAGGAGTGAGGAACAAACATGAGCATTTACGGTAAGTACGCCGATTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGAAAAACACGGGCAAAAGCTATATGGGCACCTGGAAGGTCGCGTCAAAAGCGAAGAAAGCATGGCGCAAAAGTGCGAGAGAAAAGGTTTGCCGCTGACGACAGAGTCTGCATTGATCGAAAACCGGGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGGTCATACCACTTGATCATGGAAGTAGTCACTCCCTTTGAAGACGTCCATGGCAACAAGCCTGGCACC # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.23, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //