Array 1 2054144-2061537 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033240.1 Saccharolobus solfataricus strain SARC-O chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================ ================== 2054144 25 100.0 37 ......................... TCACATCCCTCACAATCCATAATGAAAATGTCGGCAT 2054206 25 100.0 38 ......................... ATTTTAGCAATGCAATAGATCAACAATTGAAAGAAACT 2054269 25 100.0 39 ......................... ATTTTCATCTCTTGGATTGAAAATAAATGAATTTTCTTC 2054333 25 100.0 41 ......................... TGTTTCACAAATTTCAAACTTGCAAACGCAACAATTAAATA 2054399 25 100.0 40 ......................... GTTTTTGGTCAAATATTTGGACAACACTTACAAGAATTGG 2054464 25 100.0 38 ......................... TAGTCAACGACAAAGTGCTTAAAACCCGTGTTATACTC 2054527 25 100.0 39 ......................... GCTGTAATAGTCGCAATAGCAAAAGCCGAAACAATGAGT 2054591 25 100.0 41 ......................... CAATAGAATTTTTCTTAGTTGGCATTGACAAGTATAATTCT 2054657 25 100.0 40 ......................... CAAAATTCCAAACTTTGGGAATTTCTAGTTTCCAAATTTC 2054722 25 100.0 39 ......................... TTTAAACGCCTTGCAATGGTAGAAACATCAGTAGAAGAC 2054786 25 100.0 41 ......................... CGCTTTCGACTGCGACAACTGTCGTTTGGCTCATTTGTTGC 2054852 25 100.0 38 ......................... TTATTTCAAATACTATTATCTCCGCCATATGTTTACAT 2054915 25 100.0 38 ......................... ATTATCTGCAATTTTAGCAACTGAGAGGGCAATAATTT 2054978 25 100.0 40 ......................... TTTTTTCTTTAAAAGCTCTAGGCAGTTCATTTCTATTTCA 2055043 25 100.0 39 ......................... CATGCCAAATTTGTAATCCCTAGCTTGCTGAACAAAATA 2055107 25 100.0 44 ......................... AGTACTGATAATCTGAAGGTATTGGACTAGAACCCATGAAGTTC 2055176 25 100.0 37 ......................... GCTTTAACTTGGTACGCACTTTACGCCATGATAAACG 2055238 25 100.0 39 ......................... GAATTTTGTGTTACTGCAACGCCAAGATTTTCAAATGTT 2055302 25 100.0 36 ......................... GTTGAATTTTTGCAACTGGTATGTTGTATTTTTGCA 2055363 25 100.0 42 ......................... AATTTGTTACACGGCTAGGATTTTTTTTCCTAGATGTACAAT 2055430 25 100.0 38 ......................... TTCTAATCTTTTGCCCATTACTGCATCATATCTACTAG 2055493 25 100.0 38 ......................... ATCTTTACCTTTATATAAATCTTGTTCGTAACAAATAA 2055556 25 100.0 37 ......................... ACAAAACGAGGAGTTTATAGTAAAATCAACTATGAAA 2055618 25 100.0 35 ......................... ATTATTTGAAGAGAGGGTGAGAGAAGCATGAAAAG 2055678 25 100.0 36 ......................... AACTACAACGAGGTGAGAAACGATGACTAAACGTTT 2055739 25 100.0 38 ......................... TTTAACCAGCATAACAGCATCTAAAAGAATGGGAATTG 2055802 25 100.0 36 ......................... TAGATATATGGCGATGAATTGCATTAGTCAGTGGTG 2055863 25 100.0 39 ......................... ATTTTTAACGCTATGACGCTAGCCCTCATGTTAGCTTTT 2055927 25 100.0 37 ......................... AAAGTTTGTTCTTCTGTTTCGTTTTGTTGTTCTGACT 2055989 25 100.0 38 ......................... CCCCTTTTGCCGTCTTTTTAGTTACCACAATGCACCAA 2056052 25 100.0 39 ......................... CCGTATCCAGAAATAATTAACCAATCGCTTGTTTGTGAC 2056116 25 100.0 37 ......................... AAATTAACGTAAAGAGGGAATTTCTCGCACCTATCAA 2056178 25 100.0 42 ......................... GAATAAACATTGGTACTGTACTTTGTAGTACTGCATACGGTG 2056245 25 100.0 39 ......................... GCATCTGTCGGCAACCTCACTTATTCACGTGGGGGTGCG 2056309 25 100.0 37 ......................... TCTCTCAGAAACTCCCAACAAATTTGCTATTTGTTGA 2056371 25 100.0 39 ......................... TGCAATTTGTTGAATTGAATAACCTTTTCTAATTAGTTG 2056435 25 100.0 42 ......................... TTGAACTTGTAGAAATTGTTCATATGAAACAGCATAATTTTC 2056502 25 100.0 40 ......................... TTTACAGTTAATGGAATTCCTTTTTGTGCATACAATAACG 2056567 25 100.0 36 ......................... CTCATTATTTCATCATAAAGATTATCCACTGCAATT 2056628 25 100.0 39 ......................... ATGCATTCCACCTCTGTTTCTTCCTCTTTACGCATTTCT 2056692 25 100.0 36 ......................... CTCTATATTCTACTATCCTCCCTCTCTGCTCTGGCG 2056753 25 100.0 39 ......................... ATCTCTGATTTCTCAGTTCTCTAATTCCGAATACTACAT 2056817 25 100.0 41 ......................... TAAAACTGCTCAAAAATGCTAGAATTATAATTATGGCTATG 2056883 25 100.0 41 ......................... ATTTTGAATGTTACGACTCTCGTCATTTTTCCACCTCTTCT 2056949 25 100.0 36 ......................... GGAGTAATCTTTCCAGTCAAAAGACTTTCAGCCCTC 2057010 25 100.0 36 ......................... TTTATAAGCTTCAATAGAGCTTTATCTTGAGCAATC 2057071 25 100.0 39 ......................... ATAAATGGTACGTCTTCAGGCGGAAAGCCTTCCATTTGT 2057135 25 100.0 34 ......................... ATATTACCTTGCTGGATAAAGTTAATGATTTCAT 2057194 25 100.0 38 ......................... ATCTTTAATAAATCCTCCTTTATTCTCATGTAATGCAT 2057257 25 100.0 40 ......................... TTATATTACGATAAAAGTGCCAGATATGGTTGTTGGCATT 2057322 25 100.0 40 ......................... CCCACCAGAAAAAAAGAAGGGTGGGGGGCAAGGGCCCCGG 2057387 25 100.0 40 ......................... GCATATATTATTGGCTGAGGTAAGGTCGGCATATCTGTCG 2057452 25 100.0 39 ......................... CCATCCAAGCCTTGATTTGATATTCCTTTTAATGTCTGC 2057516 25 100.0 40 ......................... TTCATTATCCTCAATTTTTTCTATACCCTTGTTGTTCATT 2057581 25 100.0 39 ......................... CCCCACTGGAATGCACCATTTCTTGCAAGTAATACATTT 2057645 25 100.0 40 ......................... ATGCAGTTTGGCCTAAAGGAATATATACGTTAATGTCTGC 2057710 25 100.0 38 ......................... CCATTATTCGGCACTGCATTTAATTGAAGCACTATACT 2057773 25 100.0 39 ......................... AATATTTTGAATATTTGTACACCCATATGAAAAACGCAG 2057837 25 100.0 37 ......................... TATCTCTTATTCGTAAGGGTTAAAACAAAATTATCTT 2057899 25 100.0 35 ......................... TTTTTATTTAAGAACACTGATGGAAAGATCTATAG 2057959 25 100.0 37 ......................... ACCCATATTGAAGAGTTTGAGCATAAAAATGATTCTA 2058021 25 100.0 38 ......................... TGATTGCGTTACGTCACCATGGGGCTATTCGTTCTGAT 2058084 25 100.0 39 ......................... TTAATGTGAAGAAAATTGTTAAACGCGTTTTGCGACATT 2058148 25 100.0 40 ......................... CACTACATCTATTGTTTTTCCTTTTGTAAGACATTCCTCA 2058213 25 100.0 40 ......................... CTGTTATTACGTCTCTAATTGCCACGGGCTTAAAAAGCGG 2058278 25 100.0 39 ......................... ATCAATTTACGCCTTTTAGAAATCCAATTTCAATTATTC 2058342 25 100.0 42 ......................... GAAGCAATAGCCAACCCACAAAGCTGACACTATTCATTCGTC 2058409 25 100.0 38 ......................... GTATTCAAAAGAGAACTGGGGGATTCAAGGTAATACCT 2058472 25 100.0 36 ......................... CTCCGTAAGGCCCCCATACAGTAAAGTAGCAGTTTT 2058533 25 100.0 37 ......................... ATAGAAATATAAATCTCAGCAATTCTTGATATATTGT 2058595 25 100.0 36 ......................... TCCGTTATCATGTTGACTGGAAATGCGTTTAATAGT 2058656 25 100.0 39 ......................... ACCCACAGCACATTGCCATATCCACTAAAATTATACTGA 2058720 25 100.0 38 ......................... ATAAATATGTTAACGAATGTTGTAAATTGGTATTCGTT 2058783 25 100.0 38 ......................... AAAGGAATAATAAGCATGAACCGGGGAGTTCACGCTTT 2058846 25 100.0 38 ......................... TCAAACTCATGAAGCTACTGTAATCCATTTCACATAAA 2058909 25 100.0 38 ......................... ATCATTTCGTGAAATTTTCGCAACAAACGAAAAAAATT 2058972 25 100.0 40 ......................... ATTATATTGATAAATTGATAAGAATGCCCGAAAATGATTT 2059037 25 100.0 42 ......................... AAAAACTTTTCACATTCGACATTAAAAAATAAAATAATTTTG 2059104 25 96.0 39 ...............A......... AATTCGTATACCTTAGTAGTATTATCATCAATATTGTAT 2059168 25 100.0 39 ......................... TTCTCAATTGCCTTTCCCACGATAACCTCAATCCAGTAG 2059232 25 100.0 37 ......................... TCTACGTTGTTAAATTCATATACAGCTTGGCTCATAT 2059294 25 100.0 38 ......................... ACGTATTTAAATTTTTTGGTAGTACTTTCCTTGTGTAT 2059357 25 100.0 41 ......................... AGTATACAACAATGCAATAAGTGTTGATAGCTTTGCATCTT 2059423 25 100.0 40 ......................... CGCTTCTCCGTCTTTTCAGTTATAATGCGTAAAAGCTTAC 2059488 25 100.0 37 ......................... CAGCAAGAAGTTCACTCTCTACATCTTATGATTTCGG 2059550 25 100.0 36 ......................... CGTTTTCGTCTGGATTATTTATTATCTCTAAGCCCT 2059611 25 100.0 36 ......................... ACCTTTATTTTAAGTCCTAGCCTCTTCCCTATCCAT 2059672 25 100.0 38 ......................... TTGTTTCACCTCCTTATTAAAAGCGACAGACGGTCGAC 2059735 25 100.0 37 ......................... TCATTTCACTGTGTAGAGGTTGAACACCTAATTTTTT 2059797 25 100.0 40 ......................... CTTTGATTGTCCGCTCTCGTTCTTTTCCACACTGAAGATG 2059862 25 100.0 38 ......................... AGCTTTATGACACTCATTATCATATACTCAAAATTATA 2059925 25 100.0 40 ......................... TCGATTTTTTTCGAGGATGGATTTGTTTCATGAAAGAGCC 2059990 25 100.0 39 ......................... CAGCTCGACGATGACGAATACAAGATGCTGTATAATGCG 2060054 25 100.0 40 ......................... TTTCTCAACTGATCCACGGCTTCAGAGAAGATGTTTGGAT 2060119 25 100.0 39 ......................... GAACGAACATGGTAAGCCCTGAGGACCTTGAAAACGATG 2060183 25 100.0 40 ......................... CTCAGCAGATTTAAACTAACGATATTAATTGTACACACTG 2060248 25 100.0 39 ......................... TTAAGTTGTTTTGCTCTATTTAAAACAAAAATAATCCAA 2060312 25 100.0 39 ......................... CAAGTGCAATAGCAAACTACTACTAAATATAACATATAT 2060376 25 100.0 38 ......................... CTATATGGGGTCAGGGTGGAACTAAAATCGTGGCTTTA 2060439 25 100.0 39 ......................... CTTACTTAAGCCTAATATCTCCGCAACTTCATCAATAGT 2060503 25 100.0 41 ......................... GAACTCTCTATTGCTGACGAACTAAGAGAAAATTGTTTCAA 2060569 25 100.0 38 ......................... TCTAACAATGAATCTGTCATAAAGTGCCCGCAACTCTT 2060632 25 100.0 36 ......................... AGATTATCAATCAAGTGATAGAGATATTGCAATTTT 2060693 25 100.0 39 ......................... TGTTAGATACGGCAAGGCAAAGATTACAAACAAGGATGT 2060757 25 100.0 39 ......................... AAAATGGTGCTTATCGCTATTAGGTAGTCGGCGTTGTTT 2060821 25 100.0 36 ......................... ACTACTCTTACTTTTTGCATTCCTTTTGGAGTAGGC 2060882 25 100.0 39 ......................... TATTTACGTGCATAAAGAACATACCTCCAGCGCCTCCTC 2060946 25 100.0 37 ......................... TCGTAAACTTGAAACTGACCCGTATATCCGAATTTAC 2061008 25 100.0 39 ......................... GTATTATTCTCATAATAGGAACCGCCCTAGTGTATGCTA 2061072 25 100.0 37 ......................... CGTGATTACATGGAACATTACTTTTCCACCGAATATT 2061134 25 100.0 39 ......................... TTTATGTTTTCGAGTTCTTCTGGTCTTAACATCACTCTA 2061198 25 100.0 36 ......................... GTCAGTTATACGCTACATATGAAAAGATAAATGAAG 2061259 25 100.0 38 ......................... ATCTCTCTTAGTTTTGTCAAAGCTTCTGACCCGCTCCT 2061322 25 100.0 40 ......................... TCTATCTTTATTGTTACAACTTTTGCATACGACATAATTT 2061387 25 100.0 39 ......................... TCCTCTATCATCTCCTTTAAGCACTGTGTAATCTCACTT 2061451 25 100.0 37 ......................... TAATACTGCAGTAACGGTACAAGTCATTGACAGCGCT 2061513 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ============================================ ================== 117 25 100.0 39 GATTAATCCCAAAAGGAATTGAAAG # Left flank : GGTAAGAGCTGATGTATATAATCTTTTTGTATTTATGCATATATGATAAAACTTATTCTTAATTCTCAGATAAACGATTTTCATTATATTGGCGGTTATTAATTGGGAAAACAAACGTGCTTAAAAAGCTGTTTAAAAAGATAATGGTGCCTTAAAATGAAAAATTTATAATTGAAGTCGGAATAGTAGTAAACGATTATTTACGTGATGTAACGGTTTTATGAAAGTAAAGAGATAAAGAGAAAACCGGTTAAGTTCGTTTTCATGAAGTTGTTTAAAAGTGTGAAAGTTCGAGTCTCAATGCGACCGAAACGAATCTTTCTATAATAATTGAACGTTTATAAATGATAGGGTGTATTTCAATTTAACATAAAATCCTTGCGACCAGAAATTGTTAAATTAATTACAACTAAAATTGGTCGCATGAAGAGTAAAGGGTAGTCATGAAGATTTATAAGTAAGAAAAGAGAAAGAAAGATAGGAAGTATAAAAACACAACA # Right flank : GATATGGTATTCAGTAAATTCATGCTATAGTCAATTTCTTAGTAAGTGCGAAGAGAAATAGCTTTTGTCTATACAAAGAATACCAGTTAAATCCCTTAACCCACTTATTTCCAACATTCCCCATTTAATAGCCCTTTTTATTTCTTTGCAATTATTACGAAAAAGACTATATTTGCAAGTGCTCAAATGTTTCACGTCAAGAATCCGCAACTAACCCGTTCCCTAAGAACTAAGTATATTTTACACTTCTTTAAACTAATGGCTTACCATTGTTTGATGATGTGCATATCAAGTTATGATAAATCTTATAATGAGAATTCCAGCAAATTAAAAGAAGGCATTACATGCCTCGCCTCTAACAGACCTGAGTTCGCAACTGTAGGAAGGAATTTTGAGGGAAGTGAGGATATGGAAACAATATGTTTCCTTTTTGGCTACGTTACGATGAGAGTTACTTGAGATAAAAGAGTTATTAGTTTGCATTGTCTATCTATATAATG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAATCCCAAAAGGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.00%AT] # Reference repeat match prediction: F [matched GATTAATCCCAAAAGGAATTGAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.30,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 2080523-2076060 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033240.1 Saccharolobus solfataricus strain SARC-O chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================ ================== 2080522 25 96.0 40 .........C............... CCATATTATTTGAAGATTGGGGATTTACTTTTTGGGATTG 2080457 25 96.0 38 .........C............... TAATATTCTTCCACTGAATCATCTTTAAACAAAAAATT 2080394 25 96.0 37 .........C............... TTTGCTAATGATTCACCTTCAATTTTCACCATATTAT 2080332 25 96.0 38 .........C............... GTACTTATGTGTTGATGCAAACTCTGCGAATAGATCTA 2080269 25 96.0 36 .........C............... ATCTTAGAGAATTCTGGAGTACCTTCATAATGTGGT 2080208 25 96.0 40 .........C............... GGAATGAGTTTAGATAGCTCTTCATCTATTTTCAAATCAT 2080143 25 96.0 36 .........C............... ATGCTAACAATGCTCCGATAATACCTCCAACTCCTG 2080082 25 96.0 40 .........C............... TACATTATTGTTAGTCGGTACAGCATTTATTTGGACAACA 2080017 25 96.0 41 .........C............... TATTATCCATATTTTCATTATACATTGCACTCAGAATTTTT 2079951 25 96.0 38 .........C............... AAGTCTCCCTCAATGAAAAACTGCGCACAAATTGAGTA 2079888 25 96.0 38 .........C............... CATTTCTTCCTCATTTAGTTCGTCTTTTTCCTGTAATT 2079825 25 96.0 38 .........C............... TGTGACACCTAAGAGTACGTACAGCGTTGGGAAGAAGC 2079762 25 96.0 35 .........C............... ATAATTATTCAAGATGCGATATTGTTTCAAATTTT 2079702 25 96.0 34 .........C............... CTCTAAATGGAATTTGAGAATTTAATATTTTATC 2079643 25 96.0 37 .........C............... AAACAACGCAGCAAAAACGAAGAAGATAACGACATAA 2079581 25 96.0 37 .........C............... GCAAGGGGTAGACCCGCGACCTGTGGGGCACGCACCC 2079519 25 96.0 39 .........C............... ATGTGTCCGTTCGGTGCGATGTATATTTGTACGTCTTTT 2079455 25 96.0 36 .........C............... GCGTTTCTCTCAGTGGAACTCAAGGGCAGACAATTA 2079394 25 96.0 39 .........C............... CCCGAATCCATTAGGTGTAGTTGGAACGAAATATATTAT 2079330 25 96.0 43 .........C............... TTAACCAAAATACACGTTTACCCAGATGGCACGCTGGCTAATT 2079262 25 96.0 36 .........C............... TTGATAGTCACAGCACCTGGGTCTCCATGATATAAT 2079201 25 96.0 39 .........C............... GTTCTAGGCCCTCCACTTTTCACGAGAAAATAAATATCA 2079137 25 96.0 40 .........C............... AATAAACTCTTTGCTTTGAACGGCCACTTTGTGGATTTAT 2079072 25 96.0 38 .........C............... ACATAGAAGATGTTAGCCTTTGAAATGGTTTAGCTAAT 2079009 25 100.0 40 ......................... AATGATATTGCATGGTTCAATAACTATAGAGAAACGGCGT 2078944 25 100.0 40 ......................... CTTTGTGTAAGTGATCGCTTGTACTCGCAATCTTAGCTTG 2078879 25 100.0 39 ......................... TTACTTCTGATGGCATCCTCAAATCTCGCAATTAGTGCT 2078815 25 100.0 34 ......................... ATAAATACTTAAAGACAATATACAGACCATTACC 2078756 25 100.0 41 ......................... AGAACCACACTATATCACTAGCCGAACCGGCAATATTAACA 2078690 25 100.0 39 ......................... GAACATTTCCATGATTTTATCACTAAACTCTTCCAAGTT 2078626 25 100.0 36 ......................... AATCCAACTGTAGCTAGCACGATTCTTGCTAATGTG 2078565 25 100.0 36 ......................... AGCTTCAAACATTTTTATAACTTCATCAACTTGAAG 2078504 25 100.0 38 ......................... CACACCAAGGAACTTCAGCCAAAGATATGCCAAGTGGA 2078441 25 100.0 44 ......................... TGATAAATATGAAGTATTTACTTCCGCAATACTTGATAGAATTC 2078372 25 100.0 37 ......................... GGTTTTAAACATCTCAAGAAGTCTGAGCGGTGGTAAA 2078310 25 100.0 36 ......................... ATCTTCTTTAGAGGTGAAACATTAACAAGTACTTCA 2078249 25 100.0 38 ......................... TCTTCGTCGCTATAAGTTTTTACCCATATTCTAATGCC 2078186 25 100.0 40 ......................... CTAATTTTTTCAGTTAGTTCGTCCAACAATTCAGTGACTT 2078121 25 100.0 38 ......................... ATTTTCTTCTGTGCGAGCTTGTTTACGTCGTTCAGCGT 2078058 25 100.0 39 ......................... AAGATGAAGAAACGCTTAAGATCTTCAACTTGCTGAAGG 2077994 25 100.0 41 ......................... GAGACCAATTAGCAGCAGCAGCCGAAAGCAGCGGTTATGCC 2077928 25 100.0 40 ......................... AGTTAAACGAAGCGAGCAAAAGCGGAAAGAGAGGAAGGGA 2077863 25 100.0 40 ......................... TTGGGATGCGCTGCTAAATGTCCAAACGTCCCCGTAACCG 2077798 25 100.0 35 ......................... TTTACCTCGTCAATTGTGTTACCTTTGCAGAATTT 2077738 25 100.0 40 ......................... CTACTTATTCAGGCCACTACTACTACACTACTCACACTAC 2077673 25 100.0 38 ......................... AGTTGCTGTACCCCCTGTAGTTCGCCTCTAAAGATGTG 2077610 25 100.0 37 ......................... GTAACCTTCATTGTCTCACCCTCCTCCCGTTTCCATG 2077548 25 100.0 36 ......................... AGATAAAAACATGACTGTTACTGTATCTGATCACGG 2077487 25 100.0 38 ......................... CCGTTCTCTGTTCTCTATTCTCTATTCTCTGTATATTC 2077424 25 100.0 42 ......................... ATATATCTAATATTGCATCATTCTTATCGCTCATAATCATAT 2077357 25 100.0 40 ......................... AGTATCACCCTTATCGTAAGTACATTATTGCTTGCGGTTT 2077292 25 100.0 37 ......................... TTACATTCAAATGTTCCATCACTGGTGAAGTTTTGTT 2077230 25 100.0 39 ......................... CTTACCGTAATATCAGTGTTAATGATCATGGTCTCACTC 2077166 25 100.0 40 ......................... TTTATTTTCGTTATTACCAAATCACTAATATTTAATATTG 2077101 25 100.0 38 ......................... TGTAATACTTGAAATCTCCTGCAAACTTTTTCCCTCTG 2077038 25 100.0 40 ......................... TCACCATACACCTCTTCTAACACTTCCTCGAATGGATTTG 2076973 25 100.0 37 ......................... ATCCATGCTGAGTTCAACTACGATGAACTGATGCATG 2076911 25 100.0 37 ......................... TTCTCATCGTAAGGCTTGAAATATATTTTAACACTAG 2076849 25 100.0 39 ......................... TATCTTCCCTTATAACGTATGTGGCGTTGGGGATTTTAC 2076785 25 100.0 39 ......................... TTAGAACTTGCTGATATGGGCATGCTTTCTATTACCCTT 2076721 25 100.0 41 ......................... ATATTATCGAAATCAACTACTCCACCAATATTAAACATTTT 2076655 25 100.0 39 ......................... CCATTATTCGGTACAGCGTTTAACTGTAACACTATACTA 2076591 25 100.0 39 ......................... CCATTATTCGGTACAGCGTTTAACTGTAACACTATACTA 2076527 25 100.0 35 ......................... CGCCTACAACAACAACAACTACCACCACTACCACG 2076467 25 100.0 40 ......................... TGTACGGGTTGGAAGAGACTCTGAATGAGTTTCTATTACT 2076402 25 100.0 38 ......................... ATTCTGTCAAAGTATATTACCAGCTTTATTGAAGAATC 2076339 25 100.0 37 ......................... ATATCTTTTTGGTTATATATTCCAAGTTTCACTTGGT 2076277 25 100.0 39 ......................... TCAACTTATGCGCAATATGACAATGGAGAAAACGTATTT 2076213 25 100.0 41 ......................... TTGACAAATATGATATCATAATAGACGCAAGAGGTGTAGAC 2076147 25 100.0 38 ......................... TTTTGTGTCATCAAAAGTTCATTTAACTCTATCTTCAA 2076084 25 96.0 0 ........................T | ========== ====== ====== ====== ========================= ============================================ ================== 71 25 98.6 38 GATTAATCCTAAAAGGAATTGAAAG # Left flank : CCTTTTATATATAATTTATCCTCATAATTATCTATATACCGTACGTTAATAAAAAGTAATTCTGACGTTAAAAAGATTTTACTTTATCAGCCTTAGTGAAATTAGGAAATATTACGTATTTAAAAGTAAGTTTAAAAAGATAATTATACGTTGCAATGAAAGAAAGATGAAAGGAGAGCGATAAGAGATAAAAAATATTTTTCGATATGATACGAAATCAGTGAAACATTATTATCAAATAGAGAACTTCAAACTTCGTTTTTATGAAGTTGTTTAAAAGTGTGAAAGTTCGAGTCTCAATGCGACCGAAACGAATCTTTCTATAATAATTGAACGTTTATAAATGATACCCAATGTTTCAATTTAACATAAAATCCTTGCGACCAGAAATTGTTAAATTAATTACAACTAAAATTGGTCGCATGAAGAGTAAAGGGTAGTCATGAAGATTTATAAGTAAGAAAGGAGAAAAGAAAAATAGGAAGTATAAAAACACAACA # Right flank : TACGCAATAGAGTCTAAGTAAAATAATCCTCATTAGAGTGAGAAAATAGCGTTTCATTAACCATTAAGTGATTTTACTTCTACCTCTCCAAAGCCAATGTTCCTACTCTTTCCCACGCCGAAGTAATTTACGTAATCCAATAGCCTCCTAATGTTCTCCCTTATCTTACTGCCTTTTCTAGCACTCAACTCAAACACAACCCATCCCACAAACCCCTTATTGGGTATGTTTCCGTAATAAGCAGTCATAGGTCTTATCCTATAGTTCACCTCTCTAAAGTAGTATAACGTCTTACTACCAGTAACTCCAACGATCTTCTTATCCATATATCTATTCCAGTGGGAGGCTATAGAGTAGAAGAGGAGTGGAACGTAAGGGAATAACACGTATCTGTTCTCTTTTCTTTTCATCCTAGGCCTAGGGGGTTGTAAAAGCGTAGGCGTCTTGAAGTGAACTCTGTAAAATCTGGCGTCCTCTGCCATGACGTTTTCCTTTACTGA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAATCCTAAAAGGAATTGAAAG # Alternate repeat : GATTAATCCCAAAAGGAATTGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.00%AT] # Reference repeat match prediction: R [matched GATTAATCCCAAAAGGAATTGAAAG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 2091898-2099872 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033240.1 Saccharolobus solfataricus strain SARC-O chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================ ================== 2091898 24 100.0 38 ........................ TTTGTAAAACGTATAAGTCCCGTTAATGAGAAGACGGC 2091960 24 100.0 40 ........................ CAACGCCAACTCCGCCAATTTCCGCATTGATGTTCGCTGG 2092024 24 100.0 42 ........................ TCTTCAAACTTCCCACGGCACAACGGAGGCATGCAAATTATT 2092090 24 100.0 40 ........................ GTAGTAAGCTTTCCTTCTTTATCCTCTAGACCGCTGTAGT 2092154 24 100.0 38 ........................ AGCAATGTACGAACCACCACCTGCTCCAGTACTGTTCA 2092216 24 100.0 39 ........................ GAACTGTCGTGGTGTTCATGAAATATGGGTATGCATATT 2092279 24 100.0 39 ........................ GCAAAGAGTCCATTCAATAACACATATTTTGCACATAAG 2092342 24 100.0 39 ........................ AACATCCTGATCTATACTACCCCTAATCTTTCTGTAGCT 2092405 24 100.0 39 ........................ ATCTGGATGAGCTGTTGATCGGAGACATTAGTTAGGTCT 2092468 24 100.0 40 ........................ CAGTCTGACTCTGAGTTGGCGAATTATTATGAGAAGCTAA 2092532 24 100.0 39 ........................ CTATCCCCAAATCATTCTGCCTAATGCGTCAGGAGGGAG 2092595 24 100.0 39 ........................ ACCACGAGCACGACCTCAAATATAACACCGCCAAAAATC 2092658 24 100.0 40 ........................ TATCTTCCAGATGTCTCAGAAACGCCTTAAAATTATTGAT 2092722 24 100.0 38 ........................ TACATTAGACCCTAGTTGGTTTATCGCTGGTAACGTCG 2092784 24 100.0 40 ........................ ACACTTAGCGACATAAAAACCGCACTGACTTACAATTACC 2092848 24 100.0 40 ........................ CGACATACATATATATGCATTTCCGTGGGAGTGTTACAAA 2092912 24 100.0 37 ........................ ACATATGGTTGGTCTCCAACATTTGGTGAGTATATCT 2092973 24 100.0 38 ........................ GCTTCTACCACGATCGTATAGTATTTCTTCCCTATCTT 2093035 24 100.0 39 ........................ ACTTAAGACATTAAACGTTGCCCTAGGTGAACTAGGCAA 2093098 24 100.0 38 ........................ AAACAAACGAGGTTAATTATTCTTAACTGTATCGTGAA 2093160 24 100.0 38 ........................ CCTGGGACAAGTTCTGTTGTAGCTGAGGAGAAACGTAT 2093222 24 100.0 41 ........................ TCTGATAGCACCAGACAAGTAAAAGCGTATATCCTAGTCAA 2093287 24 100.0 39 ........................ AACATATTCTGGTACGGGTTCGCCATCTGGTACACCATT 2093350 24 100.0 39 ........................ TTTCTGTATTTTCTCGCCCTTCTAGCTAAATTTTCTAAA 2093413 24 100.0 37 ........................ AGACGCTGATGATAAGCTGTCTAAGAAGGTTTCAAGG 2093474 24 100.0 38 ........................ CATCCATTTCCGGTACACGATCCCACGTTTGTGTAGTC 2093536 24 100.0 40 ........................ ACATCGCAAGCGATCTATTGTTCAGTCTATTCCTGGCGGC 2093600 24 100.0 38 ........................ AACTCCTTTGCAATCCTATATCTAGTGTAGCCGTCTAA 2093662 24 100.0 37 ........................ CTGCTCCATCAAACGGCCCCGTGAGGGATACTATGAA 2093723 24 100.0 40 ........................ AATTTGAACATAATTCGGCCTCGTCAGTTTTCCACAGATA 2093787 24 100.0 39 ........................ TCCCTAACTTAGGTTGGGGTAAAGAAATAGAACATAGAT 2093850 24 100.0 38 ........................ TTTACTGACAACGCCATCATACTTACTAGCCCAACTAA 2093912 24 100.0 40 ........................ GTCCATTCTCCATTTATCTCAACCTTATCACAAATTTGGA 2093976 24 100.0 41 ........................ TCAGTTCTAGAAAGAATTATTAGCATTAGATCTTCTAGACT 2094041 24 100.0 37 ........................ CTCTCTATCCCAGATGGAATTCCAAAGGATCAAGCAG 2094102 24 100.0 39 ........................ ATCTGAATTTCCTCAGCTTCCATTGCATAATTTATTCTA 2094165 24 100.0 40 ........................ TATTTACCTTAATATTATGTATAATAGATAAGAGCTCCCT 2094229 24 100.0 38 ........................ ACTATGGACCTACTACAGGGCCTATCTGACTTTCTGTC 2094291 24 100.0 38 ........................ TTATTGTCAGAAAAAGAAATTATACTCCGATTAATAGC 2094353 24 100.0 40 ........................ GTCAAAATTGCCCAACCGAACGTTAGCAAAAATGCAGCAC 2094417 24 100.0 41 ........................ TCCCTTTCAGATTTGCAATATGTTAGAGCGAGCTTCGCAAA 2094482 24 100.0 39 ........................ GCTGAATTGTAAAATTACGTTTATTACTTTCAGTCAACC 2094545 24 100.0 39 ........................ GTTTTATTTATAAACGGCGGGTCTAGATAAAATACAGTT 2094608 24 100.0 40 ........................ TCACTCTTTCAGTCATCATTCTCTTTGCTGAGATTGCTCT 2094672 24 100.0 35 ........................ GCGAAAACAATAGCAGGCGAAATAGAAGATAAAAT 2094731 24 100.0 39 ........................ GCAATAGACAATATAAGGAAGAGCTTACCACCTAGAGGC 2094794 24 100.0 36 ........................ CCTAGAGGCGTAGCGGGCTCACAAGAAAACATTAAT 2094854 24 100.0 38 ........................ AATGCCTGAAGCAATAACGCCCAAGTTACATGCTCTTG 2094916 24 100.0 38 ........................ ATCCCGCTACGGCAATCCCTACGAATAGATCGGCATTA 2094978 24 100.0 38 ........................ GTGTATAAGCACATTAGTAGGATTAGGCACGGTACAAG 2095040 24 100.0 41 ........................ AATCACGAAAGCGATACTAAGGGCAATACAATACAAACATG 2095105 24 100.0 39 ........................ CTTATTTTGGTGTCAATAATCTGTATGTTGCCGTATTGC 2095168 24 100.0 40 ........................ AGATTGTTTTATTAATACCAAGTAGACAATTATATATTTT 2095232 24 100.0 39 ........................ CCAAAACATGTCACATGTGCCGATATTGATATTTACAAA 2095295 24 100.0 38 ........................ AAATCTACCGATCAACGGACGAGGGGGAACGCTAAGAA 2095357 24 100.0 44 ........................ GGGAGTTCCCATTCGATTTTGGGAACCCTCAAGCACAGTCTGTG 2095425 24 100.0 41 ........................ TTGTGCGCCTAGAGTTGCTACGCCTTGTTTCCACACCTCAT 2095490 24 100.0 38 ........................ CTAACTTGTTAAAGTTCTGTTGTAGCTCGTTAAGTTGT 2095552 24 100.0 36 ........................ GTTCCAGCTAAGATGTTCTTTCCTGCAGTCTTTGTT 2095612 24 100.0 39 ........................ AACTAAGCCTTCACTAGGTGAGATAAAGAGCATAGCTAT 2095675 24 100.0 38 ........................ ATCCGTTCTCCGTCCCGATCCGTACCGTTCTCTGTACT 2095737 24 100.0 37 ........................ AGCATAACTTCATCTTCTTCTACAACTTCGACAGCTT 2095798 24 100.0 42 ........................ TTAATTTATTGTCATCAAATCTATTTAGATACGCTAGTATTA 2095864 24 100.0 39 ........................ ATATTTCTTCGAATGGGTTTTCTGTATCACCTTCTTCAT 2095927 24 100.0 40 ........................ CATTTGTTATCAACTGTCCGGGTCCAGCGCTAGATGCGGT 2095991 24 100.0 37 ........................ CAAAGTCAGAGCTGGACTATCGTAGACATCTATAATA 2096052 24 100.0 38 ........................ ACGTAGCCTAGACTTGCTATAACTCCGTTGTATTGCCC 2096114 24 100.0 39 ........................ ATACCAACAGCAACAACAAACTTATTCTTCGCTCATACA 2096177 24 100.0 40 ........................ ACGAACACACCCCTTAAAACTCTTTTTCCAACATTCACCT 2096241 24 100.0 40 ........................ CAAAGTCAGAGCTGGACTATCGTAGACATCTATAATAGAG 2096305 24 100.0 39 ........................ TCTTAGCGAACTTGCAAAATATTCCGACCAAAGCTAATA 2096368 24 100.0 40 ........................ TCAGGTGAGGAAGATGGTCTCCAAAACTACTGTTATTGGT 2096432 24 100.0 43 ........................ GAGAGCTACAAACACGCTACCTAATAAAATTTCCAGATTGTAG 2096499 24 100.0 37 ........................ ATACAGATTTCGTTATCCATATCCTACATGACTTTCC 2096560 24 100.0 39 ........................ ATACATCGATCTTGTAATTAGATATCCATTGACTGTTAT 2096623 24 100.0 40 ........................ ATGGAATAGGCTCTCAACAGCAGTATAATTGGCAAGTATT 2096687 24 100.0 40 ........................ TCTACTCTTATAATTCCGTTACTTATCTTAACAGAGAACG 2096751 24 100.0 38 ........................ CGTTTCTATTGCAAGGTCTGAGATTTTTGGCCTGAGTA 2096813 24 100.0 40 ........................ GTATTGAAACGCTTAAGGTCAGCTCTAATTCTGTACGGAT 2096877 24 100.0 44 ........................ ATGTTACTAAGTAAGTTTAATAATATATTATAAAATGCCATATA 2096945 24 100.0 38 ........................ CTAAGCAGTGACTCACAGTTTAGACATTCACAAGTATC 2097007 24 100.0 41 ........................ TTCTAAGCGTGTAAAGATCTATCTGACAACACGAAACTATG 2097072 24 100.0 40 ........................ TTGAATATTGTACAAAGGAACGTTTAACCCTATAATAGAC 2097136 24 100.0 37 ........................ CAATCCCATTCGTTTTACTCACTTCTAAGAACCTCGC 2097197 24 100.0 40 ........................ AGTCTCTGCATCATGATCCCTGCCCCAGCTAAGACGTTCT 2097261 24 100.0 40 ........................ ACGATTTTCGGTGTGAATAATGTAAATTTGCAAGTATCTG 2097325 24 100.0 39 ........................ GTCTTTATGGCCCTCTGGGTCTTTCCACCATTGAGAGGA 2097388 24 100.0 40 ........................ TTATCCTCATTCTATCGGTGAGTGGAACAAATTGGGTAGC 2097452 24 100.0 40 ........................ ATCGTTATGCTGTAAACTTCCCCGGTTCTCAATCCCGTTT 2097516 24 100.0 40 ........................ AGTTAACAATACTTTATTGTCAAAGAAGCAAGGATATGCG 2097580 24 100.0 41 ........................ TTCAAACTAGATCTAGAAGATTTCTATCGGCATCTTTACAT 2097645 24 100.0 40 ........................ ACGATATGAAAGTTGCCAGAGCCTTAAACAGAATTGGTTC 2097709 24 100.0 39 ........................ GCTTCTTGTCCCTGAACTCCTTCTTGAAATGGATTTATT 2097772 24 100.0 37 ........................ TTTCGTATAAGGACCAGAACGGCAATACCCAAACTGT 2097833 24 100.0 37 ........................ CTACTACATCATCCTCTACCACGCCAAGCCAACAACC 2097894 24 100.0 38 ........................ ATCTAGCGTTGTCTCTGCCGTTATATATTTGAAAGTGT 2097956 24 100.0 41 ........................ ATCGCTGATCCAGAACCACGTGGCGAATACAGGAAGAACTA 2098021 24 100.0 39 ........................ ATCAAAAGTCCGCTATGGTCTAACGGTGTAAATAATTCT 2098084 24 100.0 37 ........................ AATTGGATCCCTACGGTTGACGGATCACCGAAAGTGT 2098145 24 100.0 39 ........................ ATCATATTTTGAATTCTCTTATACAGAAATCTTTGATAT 2098208 24 100.0 41 ........................ ATAGCTATATATGGAAATGTTCCAGACGCGGAATATGTTGC 2098273 24 100.0 39 ........................ AAGCCTACACAGGATAGGATACTCAAATTATATGAAAAT 2098336 24 100.0 42 ........................ TTTGCGCATTTACTTTTGTATGAGCTAGGCTATTTACATCAT 2098402 24 100.0 37 ........................ CTGAAATATCCTTCAAATTGATTTGCCAATAAATTAA 2098463 24 100.0 37 ........................ TGTTCTGTCGTTACTGTCGTAAAGCACGTCCTATTAT 2098524 24 100.0 38 ........................ ACAGTGCAGAAGTCTAATCCAAATTATTCTACTTTAGC 2098586 24 100.0 39 ........................ TCCTTGGAGATGTTGATGTTTTATACGGTATTATGTGAA 2098649 24 100.0 38 ........................ GCACAATTCGCCAACGATTTCGGTTCGCTTTATACCTT 2098711 24 100.0 41 ........................ CAAATTTCGGCGAAAATTGTACCGAATTTCGGCATTGCTGG 2098776 24 100.0 40 ........................ AAGATCATGGTATTGATATTCAAAAACATTATTCAGAGTG 2098840 24 100.0 42 ........................ ATTAGAAAAGTTTAAGATTACGCATGCAAATATGTTTTTGAT 2098906 24 100.0 39 ........................ TTCTGTTTCGAAGAAAACCCGCCTCAGATTCATTATGGG 2098969 24 100.0 39 ........................ AAATCAAACGGAAACTCCCCGGATATTATCATGTCTAAA 2099032 24 100.0 37 ........................ CCTCATCGTAAACATGCAATCTTGCATATTCAGTGTA 2099093 24 100.0 39 ........................ GCGATATATGTTATAAGAGGAGAAGGGACTTTACCCCCT 2099156 24 100.0 41 ........................ ATATACATCGCCGGTTTTATAGCAACTGCACAGCAACAAAT 2099221 24 100.0 38 ........................ GAAGTTGCAAAAATTGCCAATGTTTTTTTCAAACGCGT 2099283 24 100.0 39 ........................ ATTTATGATGAAAATAGGAAATTTTTCAGAAGAATTATA 2099346 24 100.0 37 ........................ AAAAGTTTAAATACCCGAAGCCACAAAGGTAAAAATA 2099407 24 100.0 40 ........................ CGTTCTAGAGCTAAACGATGCATACGCGGTGGTACAACTA 2099471 24 100.0 41 ........................ ATTCGGGGAAAACTTATGCATTATAAGAAGAAGAGATATTT 2099536 24 100.0 40 ........................ TCAAATAAGGAACAACTCTGGGTAAGCCCACAATACGCAA 2099600 24 100.0 38 ........................ CTTAGCGTCTCAACCTGAACCAAACTTCCTAGATCAAC 2099662 24 100.0 38 ........................ TAAACTAGATCCTTATATTTCACGTAAATGTAAAGGGG 2099724 24 100.0 38 ........................ TAAGGAGTAAGCTAGCACTAGCAATAGCGGTTGCAATA 2099786 24 100.0 39 ........................ GTTCATCAGTTCTACCTTTTGGTCCAAAGGCTGATCCAA 2099849 24 95.8 0 ..G..................... | ========== ====== ====== ====== ======================== ============================================ ================== 127 24 100.0 39 GATAATCTCTTATAGAATTGAAAG # Left flank : GCTTTATCGGAGGCATATAATAGTTCCACCCCCGAAGCTCCTCCTCAATAGGGTCTGAGGCCCTATATGAGTGGAGTCTTCGTAGCTGTCTAACTATCTGCGACCTCACAATATAATAGCAGTTGAAAAATCTAAAAACCGTTTTAAGGAGGGGGGTAAAAGAATTCCCGAATTTACTAGGGATTAACCTAGAATTAAGAAGATCATCTCTATATAAAGATTAATAATTAAACTAGGGAAAAAACTTACTTCATCGTTAAGAGAATAGTCTAGTAATTTTGTATTTTTTGTCCCGTTTTTGTAAGTGGGGGTCGTTTGATGTTAGTTTCTTAGGAGGTAGGGCGTTATCCTCAAATCATTACCTCCATGAAGAATACCTTATCCTCCCGGGCTTAGTAGGGATTGAAAAAACTATAAAAAAATTGAAAACACAAACCAGAGAAAAGCTTATAAATAACTAAGGAGAAAATAAGAAATAGTAAGAGATTAATAAACCCTCA # Right flank : GATCTTGATGATATTCAATGAAGTCCATTAGTACTTCCCCCCAAGGAGGTTGGAGAGAGGGAGAAAAAGAGTCGTTTGAGAGGTTGATAAATAGGATTATGAGGTTGGGAAGGGTTAGAGGGATGAGAGTGATTTTTGCAACGTATAAACCCCAAGATTTAAATGATTTAATGTTAACGTTAACTAACTTAAAGATTGCATTGAGGGTTAAAGAAGACGCTTTAGATAGGATTAACATGAAGGAATAAGCTAAGTTGTTGCAAGCTTCACCACCAGGGTATGGAGCGTTGAGGACTTTCTCGTTAAAGGTGAGAGATCTGATATTCAGAAATGAGAAGTATCAAGATTCATGAAGATTAGATAGATCTTAGTAGTGTTTAGAAGGTAGTATTATTTCTAGTTAAAGTGCCAAGCACTGCCTTAGGTGTAAAATCCCTTCCATCATAGGTCCACACGCTATTTAAACTGTAAGCGTATTCTAAAAACCTCCTTAACAAATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAATCTCTTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GATAATCTCTTATAGAATTGAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-A [Matched known repeat from this family], // Array 4 2499117-2499529 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033240.1 Saccharolobus solfataricus strain SARC-O chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================ ================== 2499117 24 100.0 39 ........................ ATACTGCAAGCGAATTGGCGGAAAATTGGCAGCGACGTG 2499180 24 100.0 42 ........................ TTATCTAATTTTAATAATCAAGGAAATTCATTAACTCAAATA 2499246 24 100.0 39 ........................ CCCATTCATCTCTTTCTTTGCAGCTTTGTTCTAGCATTA 2499309 24 100.0 41 ........................ TGGTAAATAGCTCTGTTAGGCCCAGTTATTCCATATTCTGA 2499374 24 100.0 44 ........................ ATTTTCTAATATATCTAATTCACTCTGCGTATCATTATGGATAA 2499442 24 100.0 40 ........................ CCCGCCCAGCCAGACTGTTTTCAGCCCAAACCGGCTAATT 2499506 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ============================================ ================== 7 24 100.0 41 GATAATCTACTATAGAATTGAAAG # Left flank : TCCATCATATGTATACATATTTAATAAAAAATTAAAGAAAAATTATAATATTCCACACTTTTTATAATGAATTCCACGTTAGACTGAAAATTGCTATAATTTATTAAGATTAAATTAATAAAATTATTATTTATATTGAAAATTCATATAAGATATTTTATATTTACTAAAAGATTTTTATCATTTGTATTTTCTTATGCTAAAACTATCCCTTTAAAATCCAGTAAAAATACGATTATTAAGAATAGACGAAAATCTTGTAAATGATTACATTTCTCTTAAAGAAAATATAGGGAAAGAGTTCCCCCGTATACAATCGTTGTTTTCCTTATTCGCTAATTCGTTTTGGGCTAGGTTGTTATCCTAAATTCATTATCTTTATGAAGAATTCGTTAAAATCCCGGGAAAACCCGGGAATAGTAAAAAAGAGAACAAAAATAATAATAATACTAATGAAAGAAGGGAGAAGAAAAGATAAAATAGAGGGTTTAAAATCCTAA # Right flank : GAAATTTATCAAGTCGAAGATTGCACTAGAGTCAAAAGGTATCATTTCTTTCTTTCCTTCATTTCTTTAACTCTCCGACTACTTCATCAGTATTGATTTTTACTATCTCTTTAGATGCTAAATCCAATAATCTTCTTGCTTGCTCTTCTTCCTTCTTTCTAACTTCTTCTTCCAAATCCTTTCTTAAAACCTCACTTACATTAATCTTATATTCTTTTGCTTTTTCTAACATTTCTCTCCTAACCTTTGTCGAGGCAGCAACCCGTTCGCCTATAATGACCTTCTTGAATTATAAGGTAATAAATATTCTGTAGTAGAATGTTTTCTACCTTATGCTTTCTAGGCTTAAAATTTAAATTCTTTAGGATGATAGATATTAATTGTGGAATGATTTCGAGGCTTAGACTAACCATAAAAGAAACCTCATAATCTTTGTACATAACGTTTGTTAAACTGTATTTAGCCTTTACATTTCTAGGTTTTTCTGCATGAGTATCTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GATAATCTCTTATAGAATTGAAAG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-A [Matched known repeat from this family], //