Array 1 6865-10511 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHLB01000100.1 Myxococcus sp. AB056 NODE_100_length_29952_cov_53.054_ID_4823, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 6865 36 100.0 35 .................................... CTGCTACGTCGTGACGAGCACCTCCATCGCCAGCG 6936 36 100.0 35 .................................... GAGACCCCCAAGGGGAAGCAGCCGTTCAACGGCAT 7007 36 100.0 38 .................................... AGAAGGACCTGGAGGCGAACGAAACGGCTGCCGCGCGG 7081 36 100.0 35 .................................... CAGCAGCCCAGCCACCGCCTTCACCGGGTCCTGTC 7152 36 100.0 35 .................................... TCGCCCTCTTCAGTGGTGAGCGCTTCCCAGGAGGC 7223 36 100.0 39 .................................... CTGCGCGAGACCGCGTTGGGTGTCCTTGCGACGCTCGGA 7298 36 100.0 36 .................................... TTATATGAGTCGCACCCACACACAAGGCTTGTGAAC 7370 36 100.0 39 .................................... CAACGGGCGCGAGGTCCGCATCACCTGCTGGATTCCCGC 7445 36 100.0 34 .................................... TTGATGTAGCGGAACCCCAATTGCTTCATCAGCC 7515 36 100.0 39 .................................... CTGGTGGGGCCGAGGATGGCCAGCCCATTGAGCATCTGC 7590 36 100.0 37 .................................... GTTTCCTGTGCGGTGCTCAGTGGCATTGGCGTCTCAG 7663 36 100.0 33 .................................... AGTCCCGTCCGGCCACGCAGGGCGAAGCGGTAT 7732 36 100.0 35 .................................... TCATTCCACCTGTCATCAAGGCCAATGCCGTCGTA 7803 36 100.0 38 .................................... ATGTTCTTCTCGCGGAACGCCACGAGAACCTCGCCCGC 7877 36 100.0 38 .................................... TTTTCCGTCTTCTCGGGCAGGTAATGCTGGAGCCCTCG 7951 36 97.2 37 ....T............................... TGTTGACGGCCCGAACATCAGGCCACGTCTGGAAGTC 8024 36 100.0 39 .................................... ACCTTGGAGTCCCTGATGAAGATGGGCACCGGCCGCGGG 8099 36 100.0 34 .................................... ACCCAGCGGCGCTGAAACGCGAGCAGGTCGGTTC 8169 36 100.0 33 .................................... ACGCCACCTCAGAAGGACAACTGCGAGGGATAG 8238 36 100.0 35 .................................... AGGTGGCCCGGGCGCCAGGACGCACGTCCGAAGGA 8309 36 100.0 35 .................................... GGCAAGCCCGTCCCGGGCCGACCCCCCAACGCCCA 8380 36 100.0 35 .................................... CGGTGCCCCGGGCGTCCGTCCATCCACTTCCGCAG 8451 36 100.0 36 .................................... TCATCCGACACGAGCGTCTCCAAATCGAACTGGCGA 8523 36 100.0 38 .................................... CACGCGCCCGTGGTGGTGAGGATCTTCGGCGTCCGGCC 8597 36 100.0 36 .................................... CGTTTGATCGTGGTGATGACCGGACCACCGTTGGCA 8669 36 91.7 41 .C..T.....T......................... TTGGCGCCGTCTTCCAGGAGATCTTCGGTGATCTCCTGACC 8746 36 100.0 38 .................................... TCCTTCCTGCTCGGGGCCGAGTCGCCCGAGGGGTAATT 8820 36 100.0 35 .................................... CAGGTGCTGACCTGCTTCCGCACAATCTCCGGGAA 8891 36 100.0 36 .................................... ACGATGGGAATCAATGCACTCGGCCGCGTGAGCGGC 8963 36 94.4 35 .....A.........................G.... ATGTTCGACCTGTTGGCCTGCGTCTGCTGGTTGAT 9034 36 100.0 38 .................................... CGGCACCGGAAGACGTAGTTGAAGAAGCCCCGGTCGAA 9108 36 97.2 37 ...................T................ CGAAGCACAGCAATACCGACGTTCATGTCAGTCGGGA 9181 36 97.2 36 ....T............................... CTTCCTTCTCCAGGTAGCAGACGGTGCGAGCGTCTC 9253 36 100.0 37 .................................... TCGTGCGGACGCTCCGTGGGGATGACGTTGACTTCAG 9326 36 100.0 34 .................................... AACCCCATCAAGGGGACCATCGAAGCCATCGGGG 9396 36 100.0 38 .................................... TTCTCGATGGTGATCCGAGTCACACCACCGGACGTCGT 9470 36 100.0 35 .................................... TTGAACACCATGCCCGGCCTGATGCCCTCCTTCTC 9541 36 100.0 34 .................................... TGAAATTGACAGCGCCAATCTCCAACCGTGGCAT 9611 36 100.0 36 .................................... GAGTTGACTGATGAGCGTGTTCCAGCGCCGCGAGTG 9683 36 100.0 40 .................................... TGCTCGGCCAGCTTCTCGCCAGCGTTCTGCACCGTCGGAA 9759 36 94.4 35 ..........................T.......T. AGTCAGGGCGCGACACTCACCCCTAGGTGACAGGT 9830 32 86.1 38 ..................----...T.......... CGGCTCGGCTCGATCGTGGTGTGCATGGCGGCTCCTGG 9900 36 94.4 36 .G................................G. CACTCCCCCACTGACAAGTTCGGGACTTTTTGCGCA 9972 36 97.2 33 ............T....................... AAGGTGTCGTAGTTGGCGAGACACCGCAGCGCT 10041 36 91.7 39 ...........TT...................C... AAGAGATGCGGTACCATCTCGGGCGCCCACCACTCGTCG 10116 36 100.0 37 .................................... GATTGCCCGAGGGGGAAACGGGGCTCCTACCCAGTAA 10189 36 97.2 35 ..........T......................... TGACGCAGGTGCCGACGCACATTGTCGGGACAGAT 10260 36 97.2 39 ...................................A TCCTTGGCCCACGGACTGCTGTCTGGGTACACGTAGACA 10335 36 97.2 34 ...........T........................ TAGTCGGTTCCGCCGTTCTGGTGCTGCCAGACAT 10405 36 97.2 35 ......T............................. TACACGGGCGTCACGTTGTCGCTGATATCGGCCGT 10476 36 91.7 0 .................................TGT | ========== ====== ====== ====== ==================================== ========================================= ================== 51 36 98.5 36 GTCCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Left flank : GGCGTGGGTGGAGGCCCGGCGCGCGGACAAGCTGGAGCAGAAGCAGGTGTTGACTGTTTTCGAGACGGAGTGGCTGTCGCGGCTGGTCTCCCTGTCCCCCGAAGCGCGTGACACTGGGGCCAGGGCGCTGCGGTCGCTCGTCAAGAGCCCCAAGCTCGAAGCGCGAAGGGATGCGCTGCTCGCCCGGATGGGGACGGACGTGGAGGGACGCTGAGGGAGCTGCTCCACCGCGCGCGGGGGGCGTTGTATGATGAATGACATTCAAGCACCTCGCCGTGGCGGAGGCCCGCGCCCCCGAAGTGGACGATTTCCCCTGTTGTTTCGTGGGGTTGAGGCTCTTTGATAGGTGAATAGGTGCATGATTGAAGAAAAGCTGAGTGATTTCAGGTGGTTCAGATTTCCGGGTAGGGGCCGGGAGCCACAACCTGGGCGAAAGCGGGGGAGGTGCTTGAAAAAGGGGCGGGTAAGTTGGCGGAACTGTTGGGAGATTCAGACGGGCT # Right flank : TTTCCGCGCACGTTGGTTGATGGTCCGAAGAACCGCCTGATTGATGGCATCGGGACTACCGTTCCTCAGTCGCGTCAAGGTCTTCGCAGCCTCCGGCGGTGCCCTTCGGGCAGCTCTGACTCGACCGGAAAACCGCAGGATGGGAGCAATCGGTTCCGCATCTCGCGGAAACTGCTGTCGCGTCGAGGAGTTGGGTCCCATCACGAGCGTGACCTCGGGTGTTCCAGCTCCGTGATGGCATTTTCGAAGCCTCCAAGTGGAAGCCCATCAATCAGAGCGCTCCAAACATGGCGTCCATCCATCAACAAGCGTGCTCAGCAACAGGTGAGGCCAGGTCGGCGTGGGCTCGCCTTGTGTGATTGCCAGCTCTTTTTGATGTTCATGGTATAGCCTGCTGTGTGGCGGACTTCTTTCCGGGGGACACTGCATCGTGCTTCGATGGACGGCGTCGCTGCTCTTGCTCACCGTCGTCACTGGCTGCGCGACAACTCGAGTCGTGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-31] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 1340-6694 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHLB01000055.1 Myxococcus sp. AB056 NODE_55_length_60148_cov_51.3831_ID_4733, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 1340 36 100.0 37 .................................... CTGCGCCCGTCGAAGCCCACCGAAGACACCGGGCCCG 1413 36 100.0 33 .................................... CGCGGAAACTGGTCGGTCCCGCTCGCATCCACG 1482 36 100.0 37 .................................... CGGCTCGGATTGGCTACGGGCCGCAGCGCGGGCACCT 1555 36 100.0 37 .................................... CGCCGCTACCAGTCCCAGGACACGCAGGACAGACCCA 1628 36 100.0 35 .................................... ATGTCCAGCTGCTGGCGGAGCCTCCGGGCGTTGCT 1699 36 100.0 35 .................................... ATTCACCCATTCTCACGCTTCCAGGCTTAACAGGG 1770 36 100.0 34 .................................... GAAAAGGGAGATGGCCTTACGGACTCGGAGCTTA 1840 36 100.0 33 .................................... TCTGCCTGGAGTGCAGACACGAGACCCTCCAGG 1909 36 100.0 37 .................................... CGCACGCTACGGGAGAGGCACTGACGCATCTTGTCCG 1982 36 100.0 36 .................................... TTCTGGCGCAAGTCGGGCGCCCTGGCGCTCGGCTTG 2054 36 100.0 36 .................................... ATGGGGAGCGGCGTCGCATCGTTACTCCCGAGCAGG 2126 36 100.0 40 .................................... AACCGCTGTTGTCGACCCGCGTGCCGAGGAACACGCCTCG 2202 36 100.0 34 .................................... CTGGCCAACCCTCGCGCAGCATCTCCACGGCGAT 2272 36 100.0 39 .................................... TTTCCTTCCAGCGCTGCGGCTTCGGACCGCTTCGCCTCG 2347 36 100.0 42 .................................... TCGAACCAGACGCGGATTGTCTTGTCGCCGCGCATCCGGGCG 2425 36 100.0 35 .................................... AAGGCCACGTCCAGGGTCTGGGTCTCCGAGCAGTA 2496 36 100.0 36 .................................... TGGTTCCGGCCTCCTCAGTTCATGAATGCCCTGAGC 2568 36 100.0 40 .................................... ACTGGAGCAATCGCCAGGACAATCGAGAGGATGGTAACGA 2644 36 100.0 33 .................................... TTCATCGTTTCGACGTCCTTTCGTGTGTGACGG 2713 36 100.0 38 .................................... ACGAAAGCGCGGAACTCCATGCCGGGGCTGCCCCACCG 2787 36 100.0 34 .................................... GCGCAACCATGATGCTTAGAGGGCCAGGACTGGA 2857 36 100.0 35 .................................... CCTGAGCAGTCGCCTCACACTCAGCCACATAAGAC 2928 36 100.0 37 .................................... ATTCCGTTCGGCAGGACAAAGTCAGGGGTGTAGCGGC 3001 36 100.0 35 .................................... TTTCCCAGGGGGGTTCGAGGGCTCCCACCTCAGAA 3072 36 100.0 36 .................................... GCGAAGTCCTGCAGGTGGACGGGCCGCCCCTGCGCC 3144 36 100.0 36 .................................... TTGGTCCACGAGGCTGCGAGTCCTTCGATTTCACCT 3216 36 100.0 38 .................................... CCGATGGGGCGGGCGCGATGAAGCGCGCGCTGACCTTC 3290 36 100.0 35 .................................... CCATAAATCGGCGTCCGGCCACCGGTGGCCATCGA 3361 36 100.0 39 .................................... ACGCGACCGACGAAGAAGCCCGAAGCCAGGCCGAGAATG 3436 36 100.0 34 .................................... GGCACCCAGAGGGGGACCGACAGCACACCGGCGG 3506 36 100.0 34 .................................... CTCCTCCGAGCGTCAGGGCTGTAGTCAATTCACA 3576 36 100.0 36 .................................... CTTGGCGCCGCCATTGACACCCTGGTGGCTGGCGCG 3648 36 100.0 37 .................................... CAGACGTCCTTCAATGGGCCACTGGGCGGCGCGGCAG 3721 36 100.0 39 .................................... CGGGGCCTCCGGCGGCGCGTCGTCACCCCAGCCCGGCGC 3796 36 100.0 37 .................................... TACTTCGCCGCGTCGTTCACGTTGCCCGCGTTCCCCA 3869 36 100.0 35 .................................... CTCTGGTGGACGGTGAGAACGTCCCCCGTGCTCGG 3940 36 100.0 35 .................................... TACCTTTCCGGGTCCACGTAGTTGACCCCCGTGTT 4011 36 100.0 38 .................................... CGAGCCCTCAAGGTCGAAATACCCAGAGGCATCCGCCG 4085 36 100.0 36 .................................... TCCATGACCCCCGCGAGTGCAGGCGCCTTCGGCAAG 4157 36 100.0 34 .................................... CCTCCAGACCGTTGGGGGACTCCACTTGGGTATG 4227 36 100.0 36 .................................... GCAGGGTTCCGAAACGTTGTAGACACGAACAGGCTT 4299 36 100.0 33 .................................... TCGGGAGCCAACGTGCTGGACCCAGGCCACACT 4368 36 100.0 36 .................................... AAGCAGACGGAGATATGGGCGAAGTACCAGCCTGGA 4440 36 100.0 35 .................................... CAACCCTTCCTCGACATCTCCGAATTCGGCCTTCA 4511 36 100.0 36 .................................... GGAGCTTCTGGCAGAATCTCTCCGGTCGTGATGACG 4583 36 100.0 35 .................................... AGATTGCTCAGGCGCTCCTCGTAGACATCGAAGAA 4654 36 100.0 41 .................................... TCTTTGACTGTCTCGACGACTTCACGCGCAGCGGCGGCCAG 4731 36 100.0 37 .................................... GCCCAGCGCACTACTCCGCCGGCGGGGCTTGGCACTG 4804 36 100.0 35 .................................... CCTACTAGCTGGTCGTCGGAAAGCTCATATCCGTT 4875 36 100.0 33 .................................... TGACACGTTGGTCCGGAGATTTACCTTTAGTTC 4944 36 100.0 36 .................................... GCTACTCCCTGGACCACGTGGGGAGCTGCCGGTGAA 5016 36 100.0 35 .................................... CGCCCCTGGGGATTCGAGAAGACAAACCGAATATC 5087 36 100.0 35 .................................... CGAACGCGCAGTAAGCGCCAACAGGCTCCACGCAA 5158 36 100.0 33 .................................... AGCTTCGCCGCGCACCTCGAGCAGGTCGACCGC 5227 36 100.0 36 .................................... ACATATTCGTCGAGAGACAGCTTGAAGAAGCTCTGG 5299 36 100.0 34 .................................... TCGGCCGGGCGGTGCCCTCCACGGGAGGGGGCTG 5369 36 100.0 37 .................................... TTCCTGCCGAAGCAGTGCAACGCAGTGGACTTACGCG 5442 36 100.0 37 .................................... CGCGTGTCCTTACCGGTGTGCGCGATGAAGTCCAGGA 5515 36 100.0 35 .................................... TGTTTGGGTTGGTCAACAGTGCGGACCCCAAGCGT 5586 36 100.0 40 .................................... TACAACTCGCCCAACGACTTCGCCACGGCCTACCTCCTGG 5662 36 100.0 39 .................................... CCGTTGGGAAACGGCACCAGGGTATTCAGGGTCGAACCC 5737 36 100.0 33 .................................... CCAGGTGTCGCGCTTTCCGGCTGGCTGACCAAG 5806 36 100.0 36 .................................... AGTCGTGCAGGGCTACGTGTCTTGCTCCCCTCGCCT 5878 36 97.2 35 ...T................................ GCTCAGGCGTCGAACTGCCGCGGAGGATGTCCGTG 5949 36 100.0 33 .................................... CCGTCCCTCCCGAACGACTCCATCAGGTTCAGC 6018 36 97.2 36 .....T.............................. CTCGAAGCCATCCTCGCCGCGCCGCAGGCCTGGGTG 6090 36 97.2 34 ................................T... GCAGCAACGAGGGGGATGATCTCTTGCTTGATAC 6160 36 97.2 33 ...................T................ AAGGTTCTCGGAGCGGAGCTCATGGGCGGAGAC 6229 36 97.2 36 ...............G.................... GCAACTGGCGCGGACTGGCGTAGAAGGAGCCCAGGA 6301 36 97.2 36 ......................G............. GCATTGGCGTAGTTGATAATGAGGGGCACGGTAACG 6373 36 94.4 33 ........T.............G............. CTGTTCGTGATGGTGGCGGAACGCGGATTCAGC 6442 36 97.2 36 ......................G............. TCCAGCTCCACCTTGCGCATCTGGGACGGGCCCGGG 6514 36 97.2 36 ......................G............. CCGCAGCTCCCGCCGCATCCTTCGGGGCCGCAGGAT 6586 36 97.2 35 ......................G............. ACGACAACGGGTTGACCGCCACGGGGCCCACGGGA 6657 36 86.1 0 ......................G......G.T..CT | CC [6685] ========== ====== ====== ====== ==================================== ========================================== ================== 75 36 99.4 36 GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Left flank : CGACCCCAAGCGGTGGCGGAAGGTGCATGCCCTGCTGAAGGGATACGGGGAGTGGCTGCAGCTCTCCGTGTTCCGCTGCTCGCTGACGGACCGGGACCGGGAGAAGCTGCGCTGGGAGCTGTCGCGGCGGATGGACGCCGTGGATACGTTGCTGGTGATTGGGCTGTGTGGCGGGTGCGTGGAGCGCGTGCGCGCCATCAACGCGAAGGAGGACTGGCCGGAGGAGCCCGCACCGTTCAAGGTGCTGTGAAGCAGGCGACAATCAAGCACCTCGCCGTGGCGGAGGCCCGCGACGGCGAAAGTGGCGGATTCCCCTGTCGTTTCATGGGGTTGGGGCTCTTTGACAGGTGAATAGGTGCATGATCGATGAAAAGCCGAGTGGTTTCATGGGGTTGGTAATTCTGGGTAGGGGCTGGGATGCACAACCTTGGTGAAGGAGGGGGAGGTGCTTGAAAAGGGGTTTGTAAGGTGCCGGAATTGCTGGGGGATTCAGGCGGGCT # Right flank : TCCGCCTCGGGCAAACCTCACGAGGTTCGATGGCCTCTTCGCTCCAGGCGATGAACTGCGGCCATTTCTGGTGCCCCAAGCAGGTGTGAAGGGGGCCATCGCGGGCTGCGCGGCCTGTCCACCGGCCTGAAGCATCCCTCGGGCGGCTTTGTCAGCGCCTCTCCTCGGACCCTCTGCTTCCTCCCCTCCACGGGGCCCCTATCACTCTCATGGAGCATCGGGAGGCGGCCGTAGTCAGACAAGAGGGGCGTCATGAACGCCCCTTGCTAGCCCGCAGAGTCTTCAGCGGAAGCCAGGTGTCGTCCTCCATCTCTTATGTCTGGGTATGGCGGCTCCCTACCTTCCTACGAGTCAGCCATTAGAACTAGAATCACGGCAGCAGTCCAAGGGGGGAATATGGTGCTGGTGGACGTATGGGAAGAGCATCTTGACGAAGCCTCCTTTCACTGGGAGCAGTGGGAGCGAGCCCTGGTGGCTCCCGACTTCACGCTGACGGAGAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 12393-12877 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHLB01000055.1 Myxococcus sp. AB056 NODE_55_length_60148_cov_51.3831_ID_4733, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================================== ================== 12393 36 97.2 36 ......................G............. AACGCGACCTGCGGCGTCTCTTTGTATCCGTGCACC 12465 36 100.0 38 .................................... CGGCGTCTCTCCGGTGGCCGTCTCCAGCAGGGCTGGGG 12539 36 94.4 34 .G......T........................... TTCTCGGAGGCGACGTCACCCGGCTTGCCATCGC 12609 36 100.0 36 .................................... TCCATGTTGGAGATCAGGACGGTCTTCTTCTTCGAG 12681 36 100.0 51 .................................... ATCTCCGCGGTAAAGGCCTCCGCGCGCTCGGCGCTCGGCGCTCGGCGCCCG 12768 36 100.0 39 .................................... TCGCCAACCTGCGCCGGATTTCGGAGGACGTGACACCGC 12843 35 91.7 0 ...............................-..TG | ========== ====== ====== ====== ==================================== =================================================== ================== 7 36 97.6 39 GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Left flank : GTTGACTGTCCTGTTGTCCAGGCGGACCCAGAAGAGCCGTTCAAGAACGAGGACCATATCGTTCCCCTGTATGGTTCCTTGAAGGACATGCTCTTCCTGATGGCCTTCAGCAGGAAGCGGATGGCCCTTCTGGAGCATCGGCGACGGTTCCTCCCTTCACTCGTGAGCAGCGGAACGGGGAATGTCCGAATCGTGGCTCCCTCCTTGGTGGGAGCCATCGACGAGACGCTTCTCCAGCTCGGCTTCCAGAAGCTGCCCTATACCAGCCCACTGACTCCGCTCTACGAGCGCGGTGACGCAGCCTTCTACGTCGACCGTTCTTCACAGGGAGGGGGACTGTCCGCCGAGTTGGCGGCACGAGATGAGCGAGAATTCGGGAGGCTGGTCGAAGTCATCCAGGATTCTACGACTCTTGTATAGTATTACCCGGTCAGGTGCACCAAGCGCGGTCGCCCCGTGTTGACGGATACGGGCGCCGTTGCCATCCCAGAGGACGGCAA # Right flank : GTCCTATCAGAAGATCTTCATTGTAGCCTGGGCCAGCCATGAACGCAGCGCCTCGCCTTCAACCCGGACGGGAGCGTTCTCGTGACCCAGATCAATCCAGGAGGCCTGGGTCGCCTGTAATCCGGAGGCGCCGCGGAGATCTGCCCCAGAAAGCCTCGCTCCATGAAGGACCGCGCCTTCCAGATGCGCATCTCGGAGATTCGCGGACGCGAGGTTGGCACTGACCAAGTAGGCGCCTTGAAGGTCCGCGCCTTGAAGGTCCGCGCCTTGAAGGTCTGCTTCGCCGAAGCTGGCTCGGAGCGCGTTCACCTGCGTCAGAATGGCCCCTCGAAGGAGCGCATAGTCCAGGTTGGCCTTTGAAAGCTGCGCTCTGGAGAGGCTGGCGCCGATGAAAGATGCGGACGCAAGGTTGGCGTGGGCGAGCTTCGTCCTGTCCAGGATGCATCCATCCAAGCGCGCCCCAGGAAGCGCTGCCTCCGATAGATCTCTCGACGACAGGT # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 90997-97926 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHLB01000008.1 Myxococcus sp. AB056 NODE_8_length_158085_cov_54.9884_ID_4637, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 90997 37 100.0 34 ..................................... TCGAGGCGGCGCAGCGTGCATTCGCGCCGCCACG 91068 37 100.0 34 ..................................... TCTGCGACTCGCCGCGCGACTCGCCGCCAGTGTC 91139 37 100.0 32 ..................................... ACCTGGGACCCCATCGGCAATCTGCGGGCGGT 91208 37 100.0 33 ..................................... AGCGCGTTGATGGGCCGCTCGTTGGAGAGCAGC 91278 37 100.0 33 ..................................... ATCATCGCGCGGGCTTCAAACTCTTCCCCCTCC 91348 37 100.0 34 ..................................... ACTGGCGCGGTGAAGGACGTTCCCCGCGTAGCCA 91419 37 100.0 34 ..................................... TCGTTCATCTGGGACTGAGTGAGTGAGCCATGGC 91490 37 100.0 35 ..................................... TCGGGGCTGGTGGTGATGCCCGATGCCGACCGGTA 91562 37 100.0 35 ..................................... CTGTACGGCGCAGACGGCGGAGACGAGCTGACCGG 91634 37 100.0 35 ..................................... GACGGGGCCCATTCCCCACGTCCGACTTGGGATGC 91706 37 100.0 34 ..................................... CAAACGAGCATGTAGCCCTCGAAGTACGCCTGGG 91777 37 100.0 35 ..................................... CCCAATCCGGATGCGCGGAAGGTGTGGGGAGAGTT 91849 37 100.0 33 ..................................... CTCGCCCTTGAACTTGTCCGCGAGGTCGCGGAA 91919 37 100.0 35 ..................................... CCCCTGTGACTGGCGGCGGGGAGTGGAATCCGGAT 91991 37 100.0 34 ..................................... GTCCCATCCGCCTCAGCAGGGATGGGGCCCGCGG 92062 37 100.0 36 ..................................... GAGCCTGGCGAGGAGCTCTCCGGGCTCATCGTCGGG 92135 37 100.0 33 ..................................... GCCAACACAGGCGAGACCATTCCGGTGGGCAAC 92205 37 100.0 34 ..................................... TGGGAGCGGAGTTGACCGGTGGCGACGCGGCGAA 92276 37 100.0 34 ..................................... GCGGCCTTCGCGATTTACCGCATCAAGGTGCGCG 92347 37 100.0 35 ..................................... GCGGGACTACGTGCGTGCGAAGTATCGGTGTGGGA 92419 37 100.0 37 ..................................... CTCGCGAATGGGTTCGACCGCCTGGAGCTGGAGGGGG 92493 37 100.0 33 ..................................... AAATCGACGCGCGCGCCGATACTGAAATTGAAC 92563 37 100.0 35 ..................................... GCTATCACATGCGTCTGGAACGGGAGCTGGACGCA 92635 37 100.0 37 ..................................... CACTTCGTCGTCATCCCGGGAGGCCGTCGTGCTTGAG 92709 37 100.0 33 ..................................... AGGTAGTCGGCCAGCACGGGCACGAGCAGGCCC 92779 37 100.0 33 ..................................... ACGTTGTGGCAGCTCGCGCGCTGCTTGTCCGCG 92849 37 100.0 33 ..................................... GTCTGCTGGTGTCGGGTCAGTTGTCGCGGCGGA 92919 37 100.0 33 ..................................... GCCTGGTGGCAGTCCAGCCAGGCCGAGAAGGAG 92989 37 100.0 34 ..................................... CTGTCGTGGCATCCGAGGCGGCAGACCCCTCGCG 93060 37 100.0 36 ..................................... CCGAGCAAGCGGAAGGCGTCAGGCGCGGCGCGGGCC 93133 37 100.0 36 ..................................... CCGTACGGCGCCCCCAGTCAGTACTACCCGCCTCCG 93206 37 100.0 34 ..................................... CTGAAGCGCGTTTTGATGACGCTCCTGCCCCCCG 93277 37 100.0 34 ..................................... AGCGAATCTTTGGCCAACTCCACGTCCGTCAGCT 93348 37 100.0 33 ..................................... CGGATACGATGTCGGCAACGCGTTCACCGAAGA 93418 37 100.0 33 ..................................... ATACTGAACACGGGGCCCCGTCTAGGGTGGTTG 93488 37 100.0 34 ..................................... GGTCCGGATAAGGTGTTCATCGCTCGCGTCTGGC 93559 37 100.0 34 ..................................... AGCGTCAATTGGGAGTTGTGGGCCGAGCGCTGAC 93630 37 100.0 33 ..................................... ACCCCCCGGGCACGTTTGCTACGTACCTCGACA 93700 37 100.0 34 ..................................... AGCTCTCGCCGTCGAGGTCCGTCCAAAGCCAGTC 93771 37 100.0 37 ..................................... ACGTGGGACCCCATCGGGAACCTGAGAGCGGTTGCGG 93845 37 100.0 36 ..................................... AAGGACCAGATGCGGGAGCTGTTCCGCGCGTCGCTG 93918 37 100.0 34 ..................................... CTCATATGCGTCGTCCTCCCCGCGCGGGCGCGGT 93989 37 100.0 35 ..................................... GCGCGTGCACTGGCGTCCCAGCGCGCCGCCGAAGC 94061 37 100.0 38 ..................................... CACGTGGTTGGTCCGTGGGACGCGGTCGGCTTGGTGGT 94136 37 100.0 33 ..................................... ACAGGTCTCACCATCGGGCGTCGCGGCTCGAAG 94206 37 100.0 32 ..................................... CATTCGCCAAACCGAGCCGTGCAGCTCTCCAG 94275 37 100.0 36 ..................................... TTGGATATGGCTGCATTGTCTCGGTATTCGGCGGCA 94348 37 100.0 36 ..................................... GACCTCCGCGTTCTGGTGAGACGGCGACCGGTCGGC 94421 37 100.0 35 ..................................... GTTTCCCGGTTCGTGAACAAACCGCACCTTCACGA 94493 37 100.0 34 ..................................... GAGATGGCCGACATGACGGTCGAAATCGAGACGT 94564 37 100.0 34 ..................................... ATTTACACACGGCGCTTGGCGGACGCAGCGGCAT 94635 37 78.4 34 .......................T.TCAC.C.TC... TGGTCCGAAAATCGGGGGGCAGACCACGCAGCGG CTC [94658] 94709 37 100.0 32 ..................................... GCGATGGCTCCGAGGGAGCCAGCGCGGGGCAG 94778 37 100.0 33 ..................................... GTGAGCAGGAGATTCCCGAGTATTGGGCCGCCA 94848 37 100.0 32 ..................................... CGGTAGCGCGCCACCTCAGCGAACCCAGGCCG 94917 37 100.0 34 ..................................... TCGATTTTCGACGGCCCTCCGGCTGACCCGCCGC 94988 37 100.0 33 ..................................... TCGTAGTCCGGGAGCTGCGCGCCGAAGTGCAGA 95058 37 100.0 33 ..................................... GGCCAGTTCCTCGCGGGCACGCTCGCGGTTGCG 95128 37 100.0 31 ..................................... GAGTTCAACGAGGTGCGCACCTTCGCGGGCT 95196 37 100.0 33 ..................................... TGAGTTGGTGGAGCTGTGCCGCTCGACCAGCAT 95266 37 100.0 35 ..................................... CGGCCCCTCCCCACCCACGCACTGACAACGGGCGC 95338 37 97.3 35 ...............T..................... GACCCAGACGACCCACGCAAGGCAAAATCGCGTCG 95410 37 100.0 38 ..................................... GTAGCCTCGCGGCCGCGCGTACTCGTCCAGGCCGACCC 95485 37 100.0 35 ..................................... CTGTTTGGGGAGCCGTCCAAGGCCGGGCAGAAGAA 95557 37 100.0 34 ..................................... CTGGGTGCGGACCTTGTGGCTCCGCATCTACGAC 95628 37 100.0 33 ..................................... GTCTGCTCGAAGAGGAGCTGAGCGCCGCGCGGG 95698 37 100.0 33 ..................................... ATGATGCGCCCACGCCCAACGTAGGCCCCGATG 95768 37 100.0 35 ..................................... CACGCCGTGCGCCACACCGCGTGCACCGGGGTGTA 95840 37 97.3 35 .................................G... GGTTTGTCGGAGGGAGAGAGCGTTGAGGTCCTCCC 95912 37 100.0 34 ..................................... AACCCGGAGGGCCCCAAGGTGATCCAGAAGGGCC 95983 37 100.0 35 ..................................... GCGTAGTTGGCGACCAGGGAGGTGGCGACGCCGAA 96055 37 100.0 32 ..................................... ATTCCACCGGCAGCGCCCGGTAGCCGATGAAG 96124 37 100.0 34 ..................................... TTCGTGCCCGGGGCGAACCGCACCTGGCAGGCCG 96195 37 100.0 35 ..................................... AAAGGCCGGAAGCCGAACGGCGACTGGCACTGCCG 96267 37 100.0 34 ..................................... CGGACTCGGTACGGCGAACGCATCGCCGATCGCA 96338 37 97.3 33 ......................T.............. TCAGCCTTGGCCCACGTCTCTTTGAAGTCGTCG 96408 37 100.0 37 ..................................... GGGTCCTGCGCGTTCCGCTCGACGACGAGGTCCGGTC 96482 37 100.0 34 ..................................... GAGTCCGCGAGGGGCCAAGAAGGTCGGCGACCTG 96553 37 100.0 33 ..................................... ACGTGCTCCGGCCTGTCCAACGCGCGGAAGAGC 96623 37 100.0 33 ..................................... TGCGCGGCCTCGCGCGTATTCCACTGGGCCTGC 96693 37 97.3 34 ....................................T GCGCGGTGGAAGCGCAGCTTCAGGCCGCAGACGA 96764 37 100.0 34 ..................................... TGCGTCTCGGCGAGTGGCGCTCCCTCTGGCCTCT 96835 37 100.0 36 ..................................... ACGACGGTGGGCACGCTCAGTCCCAGGCGTGGCCCG 96908 37 97.3 32 ..............................C...... GTAGGGTTTCGGGTGGCCCATCTGCAGGCGTG 96977 37 100.0 34 ..................................... GACTGTGACTACCACGACATCGACACGGGCTACC 97048 37 97.3 32 ...................G................. TGCTTCGAGTGGTCCGGCTACTGCGAGCTGGA 97117 37 97.3 34 ...................G................. CATCCGCGTGGCTCAAGGAGCCCGTCAACAAGAA 97188 37 97.3 33 ...................G................. GCGTCCGGCATCTTCTGCTCCTTCTGCGGCTCG 97258 37 97.3 32 ...................G................. ACGCCGAAGAGCTAGCTAGGGGCGCGGCCTGG 97327 37 91.9 36 .G................CG................. ATTGACCGGCCTCGCTCGCGCGAGCAGGTGGCCGGG 97400 37 97.3 34 ...................G................. GAGGCGTACTGGTCCGTCGAGGTGCTGTAGGTGA 97471 37 94.6 33 .C.................G................. TGCTGCGCCTGGGCCTGCGCCGCCGCCTGCGCG 97541 37 97.3 32 ...................G................. AGGTCATAGTGAGGAAGATCTCCGTCGGTCTG 97610 37 67.6 27 ...................G.TT.AAAC.CC..GG.G CCGCTATGGATGACGAGCAGACGAGCA Deletion [97674] 97674 37 94.6 33 ...................G...............C. CGCATCGCGGGGTGGTTCTGGGGCAAGGGGGCA 97744 37 94.6 35 ...............TA.................... CCGACGACGTCCTGGCAGCCCGGCAGCGTGCCGCC 97816 37 97.3 37 ...................G................. TCCATCTTGTGGACGTCGTAGCCGACAGAAACAGAGG 97890 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 98 37 98.9 34 GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC # Left flank : TCCCTTCGCGATGCGCTGATGCGTAGATTGACCGTGCTGATTTGTTACGACGTGCGGGTGTCGGACCCACAGGGGCCTCGGCGCCTGCGCAAGATTGCGCGGGCTTGCAGAGACCATGGCGTGCGAGTGCAATACTCCGTCTTCGAGTGTGTCCTGGAGCCCAAGGACTGGGTCGTCCTGCGCGCCCGCCTGCTCGGCGCATTCGATTCGGAATGCGACAGCCTGCGCTTCTACTTCCTGTCGGAGGACGATGCCCGGAAGACGGAGCATCATGGCGCCAGAGCACCCTTGGACGTCGAGGGGCCGCTGGTCCTGTAGGCCTCCGCGAACCCGTCCCGGTGTACGCTCCGTCGAGGGTTCGCGCTCTTTGAAATCCCAAATAGAATCAAGGGGTTGGGCGAGTGTACGTCACGAGCGGCGGGGAGCCTTCGTGGCAGTACGGGCTGGTTCGCGAAATGCGGCTGGATTCCGTAGTCAGAGCGCTATGTTGGAGAGGCAGA # Right flank : CGGTTCAGCTCGCCGGTACTCACCGTTGCTCCCTCCACGTTTGAGCGAAGGACTTTCACCGCTGGATCATCCGGCTCGTAGGCAGCAGCAGTTTTCCGCGGACCCGCTCGTGCTCAGGCTCCAGACGTCGCCGGGCATTCCCAATCCATGGCACTTCTCGTTCGAGGTCTTCAGGGATGGCCGTTCCAAGCGCAACGGCTCGCGCCTATCCGACGTGAACGCGGCCGACGCCCATTGGCTCACGATGCTGCTCATCGCCGCGCACCGGCTGGACGAATACAAGGAGGATCACAGCGCCCTTCTCCCGTCGCACATGACCAGCAGGTGACGACGTTCGAATTCACCGTGGACGGCCGGCGCACGCGTCTGACGTTGGACAGCGACACGCCGCCCGACATCCTCCGCTTTATCCAGCAGGTGACTGCCGCTTACGGCATCGAACCTTGAGCGCGAGGACCCCGGGTGCCCCAGGGCTGGAGGAACACCTCTGTCTCCTCCAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.10,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-28] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //