Array 1 2592168-2595977 **** Predicted by CRISPRDetect 2.4 *** >NZ_WSUT01000005.1 Sphingomonas carotinifaciens strain DSM 27347 contig5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2592168 29 100.0 32 ............................. TGAACGAAGCGGCTGCGGAAGCCGATCAAGGC 2592229 29 100.0 32 ............................. TGTGGGGCGGGATCGCGGCGGCGGTGGAGCGC 2592290 29 100.0 32 ............................. GTCCGTCATGGAAGCGGACCGCGATCGGCGGC 2592351 29 100.0 32 ............................. CTCCCCGAGGGAACCGTCCTCCGGGTGCGCGG 2592412 29 100.0 32 ............................. CTCCGGGGACCAAAATTGGAACCCGCCGATCT 2592473 29 100.0 32 ............................. CAGGTGAGCATGGACGTTCCCGCCCGGTTGCC 2592534 29 100.0 32 ............................. GGAGATAGGACCATGACCGCAACCGCCCCCGC 2592595 29 100.0 32 ............................. ACGATTCCGGGGTTCTCATTGACGAGGGTGAC 2592656 29 100.0 32 ............................. TCCGCATCCAGGGCATCGAGCAGGATTTGCGT 2592717 29 100.0 32 ............................. GCGTCTTTCAGCGTATATGCCCACGCCTTGAC 2592778 29 100.0 32 ............................. TCGAATGCCATAGCATCATTCGGCAAATTATC 2592839 29 100.0 32 ............................. GCCTTTGCGGCGGGTTCGATGGCGCTGACCAA 2592900 29 100.0 32 ............................. TCGAAGCGCGCTGCGGGAGGGAGGCGATCGAG 2592961 29 100.0 32 ............................. TCCTGCGCCCTAGTAACCCTGCGAACTCCGCG 2593022 29 100.0 32 ............................. TCGACCTCGAACATGCGACGGTGAGGCAGCTT 2593083 29 100.0 32 ............................. AACGTTGACGAGCCCAAGGCATGGGGGAACGT 2593144 29 100.0 32 ............................. AACGTAAGAGGTACGAACGCGTGCGCCATCCT 2593205 29 100.0 32 ............................. CCGACCGACCCCAAAGCGCGCTTCGGCATTGC 2593266 29 100.0 32 ............................. GTCGTTGTAAGCCTTCTGAAAAATCGACACGG 2593327 29 100.0 32 ............................. CACTGATGAAACTGGACTCAAAGAAATTCTGG 2593388 29 96.6 32 ............................G CGATTTCCAACTCGTGGATCATCTACGGCAAG 2593449 29 100.0 32 ............................. TCATCCTGCGCCACGATGCCGCGCTGATGCCG 2593510 29 100.0 32 ............................. CGAGGATTTGACGGCCCTTGGTGGTGCAGCCG 2593571 29 100.0 32 ............................. TTCGTTCCTGTTAGGGTGAGCCATGGCTGAGA 2593632 29 100.0 32 ............................. CGGGACAAGCCTTTTGCCGCCGCCGACGAGCC 2593693 29 100.0 32 ............................. GGGTCCTCACCGAACGCCAGCAGGACGCCGCA 2593754 29 100.0 32 ............................. CTGGGCGACGGCTTCACGGTCCAGACCAACGC 2593815 29 100.0 32 ............................. GTGTCGGGCCAAGAACGCGTGCATGTCTTCAA 2593876 29 100.0 32 ............................. ACGATCCTGAGACCGGCGAGGCGAAGCCGGTC 2593937 29 96.6 32 ............................T TGCCCTAATGCATCGTCATCGCGGATGACACG 2593998 29 100.0 32 ............................. TCATGTCCGCCGGGCATAGGCTGGCATCACTG 2594059 29 100.0 32 ............................. TGGCGGCGCAACTGCCCGGTCGCGAGGTTGAG 2594120 29 100.0 32 ............................. CTTCCGCAAGGAGCTGACGCCGCGCCTCCAGG 2594181 29 100.0 32 ............................. TCGTATGTCGGCGTCATCGGCGAAGTCACGCT 2594242 29 100.0 32 ............................. AGCCCCACATTGCGAACAGGGCGCCCCTTGGC 2594303 29 100.0 32 ............................. CGAGACGAACACCTTGGCGACGGCGGCAAATA 2594364 29 100.0 32 ............................. CACATCTCACCCTTCACCGGGGCGCCCTGGCC 2594425 29 100.0 32 ............................. CCAACGCGCCGACCGCGCCCGCGCAGCGCGCC 2594486 29 100.0 32 ............................. CGGTTCCATGCCGTGAGGCAATGCGCGATTTA 2594547 29 100.0 32 ............................. TCATATGCGGTCTGCCAACCATTCGGGCGGCG 2594608 29 100.0 32 ............................. AAGAGGTGAGCGATCTGATCGACCAGATTGTC 2594669 29 100.0 32 ............................. GGGCTGGGTCCGGTAATGGGTGACGGCAAGAC 2594730 29 100.0 32 ............................. CGCCGATTACCTTAAAGCCAATGTGCCGAATC 2594791 29 100.0 32 ............................. GACGCCTTACGGGGCATCACACAGTCCATCGA 2594852 29 100.0 32 ............................. CGGTGGCGAGCCGATACAACGGCCCGGCGTTC 2594913 29 100.0 32 ............................. CTGGAGGATCCGCGCGATGAGATTGAGCGGCG 2594974 29 100.0 32 ............................. GGCGTCTGGATGCCAAGCGCCAAGCAGCGGGC 2595035 29 100.0 32 ............................. TTGATCTGCCAATCCCTGAGCGCCGGCTGCAA 2595096 29 100.0 32 ............................. CTTTGCGTTGCGATGCTCGACCGGCTCGATGA 2595157 29 100.0 32 ............................. AGGCACTGCGCTGGTCTATACTGTGTCCAAGC 2595218 29 100.0 32 ............................. CGGGCCAAGACCATGGCCGAAATCAACAGCTC 2595279 29 100.0 32 ............................. TCGCGCTGAACCTTCGCGAGGTTTTGCCCCTC 2595340 29 100.0 32 ............................. GCTCTCCGGCGCCTCGCGCACCAAGCCGCCGA 2595401 29 100.0 32 ............................. GACAGGCATTTTGTCCGTCAGCTTCGTGAAGG 2595462 29 100.0 32 ............................. GCTTCCATGGGGATGTGGAAGGGCTTGCCGGC 2595523 29 100.0 32 ............................. CGCGGGGGGCGCTCCGGCTCACCCGTGTTCAC 2595584 29 100.0 32 ............................. GTCACAGTCCGTGCTTGGCGGGTCACAGACGG 2595645 29 100.0 32 ............................. GAAGCGGAGATCGTGCTGGAAGGCGACGGCAC 2595706 29 100.0 32 ............................. TGCCATTTCGGCATTTTGCCTCTTGTGGGAAA 2595767 29 100.0 32 ............................. ATTATCACGACGTTCAATGCATCGACCGACAT 2595828 29 100.0 32 ............................. CTTCGGTCTCAGGAAGGAGGACGAAGCATGAT 2595889 29 100.0 31 ............................. TCACTAGCCCCAGCCAAGAGACGATCGCACC 2595949 29 72.4 0 ....T..........CT...CG.T..GG. | ========== ====== ====== ====== ============================= ================================ ================== 63 29 99.5 32 GGCTCCCCCGCACCCGCGGGGATCGACCC # Left flank : CGCTGATCCCCGGCATGATCGACCGGATCAAGACGCTGCTGATGCCGGGCGGCGTGCCGGCCGAGGCTGCACCGCCGGACGCCGGCGACGGCGGAGCGGTGACGCTGGACCGGGAGGCGGGGTGATGCCGCTGACCGTGATCATCACCCGCGACGTGGAGGATCGCTATCGTGGCTTCCTGGGCTCGGCGATGCTCGAACTGGCGCCCGGCGTCTACGCGCAACCGCGGATGAGCGCGGGCGTGCGCGGGCGCATCTGGACCGTGGTGGAGGAATGGCACGGCCGCCTGCGCCGCGGCAGCATCGTGATGTGCTGGGCCGAAGCGGGTGCGGCAGGCGGCCTGGGCCTGGCAACGCTGGGCGAGCCGCCGAAGGACGTCGTGGCGCATGACGGCATCCTGCTGGTACGCCGGGCACTACCCTCGCGCGGAGTAATTGTGGGGGAGGGCTGAGCGCGGTTTCTTTGACATTGTGAACGAAAACAGCGATCTGACTGGCAGA # Right flank : CACAACAGTTTTGAACCCACACCTCCAAATCCATACGCCACTTACGGATAGCTCCCCGCCCCACCCGCTGCTACAACAGCAATCGTCACCGCTATCGCCCCCAAGCCACGACGCCCGCATCCATCCGCCACCCGATCCCCACCACCTTTTGCCGCGGCTCCTTCACCCAACAACCCGAGAATGGTCATGTCAGCGATCCAGCGTCTTCTTTCGATCATGGTTCGGCTGCGTGATCCGGAGGCGGGGTGCGAGTGGGACAAGGTGCAGACGTTTGCGAGCATCGCGCCGTACACCATCGAGGAGGCGCATGAGGTGGCCGATGCGATCGGGCGCGGGGACATGGACGAGTTGAGGGAGGAGCTCGGCGACCTGTTGCTGCAGGTCGTGTTCCATGCCCAAATCGCCAAGGATATCGGGGCCTTCGACTTCGACGACGTGGTCGCCGCGATCAGCGACAAGATGGAGCGGCGCCACCCGCACATCTTCGGCGATGTCGCAGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACCCGCGGGGATCGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //