Array 1 399559-401139 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012670.1 Sorangium cellulosum strain So ceGT47 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 399559 36 100.0 35 .................................... TTCACGCGCGGCGCGACCTTCGACGCGGAGGGCGG 399630 36 100.0 37 .................................... GGTTTCCCCGGCTGTTAACCACGGGCCCCCCTGGTTT 399703 36 100.0 39 .................................... CTGGTATCCGTCATCGCCAACCTGGCGACCACGGACGCG 399778 36 100.0 35 .................................... ATCGTTGCCTCCATGTCCACAACCTAGCACGCGTG 399849 36 100.0 36 .................................... CCGGCCTCGTGTGCGAGGGGATCGCGGCGTACGAGG 399921 36 100.0 36 .................................... TGACGAGCCCTCGTGGCCGATCCTGACGGGGCCGCC 399993 36 100.0 38 .................................... CTTCCGGTCGCCGGAAGAATTCTTCTGGTGGGTCATCG 400067 36 100.0 38 .................................... CCGCTCCTCCTCTCACGCCCACAGCCAACCCACCTTCA 400141 36 100.0 38 .................................... CTGGGTAGGAGGTGAACATGATCTTCGATGTGGGAAAG 400215 36 100.0 37 .................................... TGGGTGTAGTCGCCCGGGATTGAGCGCAACGCCGCGG 400288 36 100.0 39 .................................... GGCTGCGATGGCCCGCGCCGAACTCGCGCGGCGGGCATC 400363 36 100.0 38 .................................... TAGAGCGTGCTGGGGTCGTAGGTGCGGTGAGTTTGAGA 400437 36 100.0 42 .................................... CGTGATCTCGATGCCAACGATGTACGCGCCCGCGGGCGCCTG 400515 36 100.0 40 .................................... AAGGAACGCTTGCATACCCAAGCGCCGCTCAGGATCCGAC 400591 36 100.0 38 .................................... CAGAAAACCTCCGGCCAGCACCGCGACATGCAGCGCGA 400665 36 100.0 37 .................................... CCAGGCCAGATGTTGACATCTGACCCCATGTAGAACG 400738 36 100.0 38 .................................... GACGCGGAGCCGGTACCCCACGGCCGCCAGCAGCCTGA 400812 36 100.0 38 .................................... GATGACGCCTTTCAGCGCGACAGCGGGGAAATCGACGT 400886 36 100.0 38 .................................... GCCTTCGGCGCCGGCTTCGCGCCGCACGCGCAGAGGCC 400960 36 100.0 36 .................................... GTTGCCCTATCGTCGTCGTCGGCCATGCGGCTCGCT 401032 36 100.0 36 .................................... GGAGGATCACGATGGCTACACGGATTGTGGCGCTGT 401104 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 22 36 100.0 38 CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Left flank : CGCCCCCTGGCCGGCGGGCGCCGCCCCCGGCTCGGGAGGCGGGCGCCCCGCGGGGGGTGAGGCCCGGGAGGTGGGGGGTGACTCCGGCGAGGTGGGGGGTGACTCCGGCGAGGTGGGGGATGAGCGGGCGGAAGCGGGGACGGCGTGGCGCGAGGTGGGGGGCGAGCGCGGCGAGGCGGGGGCGGCGGCGTCGGAGGTGGGGAGGCGAGCGGCGGAGGTGGGGGAGAGGGCGGCAAAGCGCCGGGGGAGAACGGAAGGGGCTGGGCGAGGGGAGGGGCGGGTATGGTAGAAGGAGGAGGGCGGACCGGTTGCGAGCGGTGGAGTGACGCGAAAAAGCCGGGGACCGCTCGCAGAGCCGGCAGGTGTTTGAAAAGATGAAGGATTTCTGGCCGGCACCGGGGCGCGCGGGGCGCCTCCGGTGGCCGCAGCGGGGGGTCGGACGGGGACCTCTCGCAAACCGGGTTGTAAGTACGCGAAATCTTTCGTAGGCTGCGAGGCCT # Right flank : CGACGTCGAGGTCGTGGGTGCTGACGGGTTCTATCCCTGACAGATCCCCTCATTTTATACGGCAAATTCGTCGATTCCCGCGCCGCTGGCACACCGCTTCCACTGAGCACCAATGTGGGACAGTTGTTTGCATGGGCCCACGAGGCTCAGGTGTTTCGGGTGAGCCTACGACGAATACGTGAGAATCTGCGGTCGCTGGCCGGAATAGTATCAGTATGAGGCAATCGGCGGGCGTCGACGCGTGCACGGAAGGCAAGGCGAAGGGGAACTTGACGACGACGCGCTCGGAGGAGCGGTCGCATTCGATGAGGGCTCGCAGGCAACTCGAGCGCGTAGGGCTCAGCGCGAGTAGCATCGAGCGGTTCCTTCACGCCGCTGTGAAAGTCGACCTGCACGTCAAGACCGTGCTGTCCTTGTCGCTGGCAACCCTGGGCGTTCTGCACTCGGTCTCCCTTTGCATTCACGTGATCGGGCGAGGGATGGCGTGGGCAAGAGACGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.70,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 2 402638-403408 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012670.1 Sorangium cellulosum strain So ceGT47 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 402638 36 100.0 40 .................................... CCGTATCCTCCTCCCGGCGCCGCGCCGATGCTGTGTATAT 402714 36 100.0 36 .................................... AGCCGCCGGATCTCCACGTCCTGGGCCCGGCCGAGC 402786 36 100.0 36 .................................... TTCACGCTGGTTCTTTCCCCGTGATGGGGGGGTGTA 402858 36 100.0 35 .................................... TCGGAGCTCGCAGGCCGCCTGTTCGGCCAGCTCGC 402929 36 100.0 39 .................................... CGCGCGCGCGCGCGACTCACATGGGAGATCCTTGGATAG 403004 36 100.0 38 .................................... AGGATCTCGCTCGCCAGCACCAGGCCGGGCAGGCAGAC 403078 36 100.0 39 .................................... TGAGGCTTCGCCGTCGTCGGCGGGGAGGGCGCACGGTCG 403153 36 100.0 37 .................................... CCCAACCAGCCCCACCAGCCCCACCAGCTCGCCTTGG 403226 36 100.0 38 .................................... ACGTACGCCGCCGCCTTCTCGTCGTTGCTGGGCTTCTT 403300 36 100.0 37 .................................... GAGGCTCAGGGTACTGGAGGAGAGGCGATGAAGTCGG 403373 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 11 36 100.0 38 CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Left flank : CGCAGGACAAGACGGCCATCGCGGCGGTCGTGCTCGTTCACGACAAGCGGATGAAGGAGCCATGGTGCCTCGCAACCAGCCGTGCCGACCTGACGGCGAGCCAGGTGACCAAGCTCTACGGCCGTCGCTTCTGCATCGAGGAGACGTTCCGCGACGTCAAGAACGTTCATTTTGGCATGGGTCTCTCCGCCACACATATTGGCGACACTGCCCGACGCGACCGACTTCTGCTTATAGCTGCCTTTGCGCACGTGCTCCTGACGCTCCTTGGGGAGGCAGGAGAACGGGCCGGCCTCGATCGCCTCCTGAAGACCAATACCGTGAAGCATCGAACCTTGTCGCTCTATAACCAGGGATGCTACTGGTACACAGCCATTCCCAACATGCGGGAAGAGCGGCTTGTTCAACTCATGACAGCGTACGGCGAGGTGCTCCGTGAGCACGCCGTAACCCGTGAAATTCTTGGGACTATATGAGGGGATGCATCAGGTTCTATCCGG # Right flank : CAAGGGCATGTTGTTCAACTTTAGAGCGCCTAACAAAACCCGGCCTGGATATGGCAGAGGCAGATCAGGCACACGGCGAGCTGGAGGAACGCTCGGTGAATATCGGCACGGCGTTCATACCGCACAGTCAAGCGCCGAAAGCGGCGGAGCCATGCGATCGTCCGTTCGACGACCCAGCGGTAACGGCCGAGCTTCTCCGACGACTCGATGCCCTTGCGAGCGATGCGGGGCACGATGTGGCGCAGATGGCAAGCCAAGCGCAGGGCCGGGTCGTCGTAGGCCTTATCGGCGTGCAGTTTCTTGGGGCGGCGCCGCGGTCGGCCGCAAGGCCGCGCGATCGTCGGTACCGCATCCACCATAGGCGTGAACATCTTCGAGTCATGGACGTTCGCCGGCGTCATCTCGACGGCGAGCGGGATACCATTCTGATCGACCAAAATGTGATATTTCGTGCCCGGCCGACCGCGATCTGTGGGGTTCGGGCCAGTCTCCTGGGGCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.70,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 3 404634-404960 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012670.1 Sorangium cellulosum strain So ceGT47 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 404634 36 100.0 36 .................................... TCACGACACCCGTTGATAGTCGGTCGGGCATCGGGT 404706 36 100.0 38 .................................... GGAGGCCGGCTCTTCTGCGCCGCGCGCAGCATGACGGC 404780 36 100.0 36 .................................... ACCGTGTACGGCCGCTACCAGGCGGACATCCAGGAC 404852 36 100.0 37 .................................... TCCGCCGCCCCGACAAAACCCGTGTCCTGGCTGACGA 404925 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 5 36 100.0 37 CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Left flank : CCAGCAATGCCTTGTGGAGCTGACCCCAGACGCCAGCCTGCTGCCAGTCGCGCAACCGGCGCCAGCACGTCATGCCGCTGCAGCCGAGCTCTTGCGGGAGATATTCCCAAGGAATCCCCGTTTTCAGCACGAACAAGATCCCCGTCAGGGCGATTCGATCAGGCGTGCGCGGCCGGCCGCCCTGCGGCTTCGGCTCCGCCTTCGGCAATAGAGGTTCGATTCGCTCCCAGAGTTCGTCCGGCACCAACAGCTTGCCCACGCGTGCAATCTAATGCGCGTACCGTTTGTCTCAAGCGAGCGGGCGCTCGAGCGAGGTCGGCGGGCTATTGTTAGGCGCTCTTAGAGCGCCGAACAAAACCGGACCGAGCCAGGCGGCCGAGGGGGGCAGCGCTCGGCGCGACGAGGAGCCCTGCTGAAGTAGGGCGACGAGGAGCAACGACGCGATGCGCCCGCCCTCGGCCGCCTGGCGACGGGAGGTTTTGTTAGGCGCTCTTAGGGAC # Right flank : CCTCCAATGACGTTGCGAAGCTCGAACTGATCTCCTCGTGCTCTCAAGCGCCGGCCGCCGGCTGCTGCCCCGGGCACCTCAATCGTGCTGCGCCGCGTCGCTCGTCCGCGAGAGGCTCGCCAGGAGCTCCGCCCGCTCCGCCACGGTGCCGGGGGCGACGTCGACCACCTCGAAGCCGGCCGCGCGGTACATCGCGCCGAGCCGCCCGTTGATGCGCTCCGCCTCGGCGGCGCGCTCCTCTCGGCTCCTCCCCCAGCGCGGCGCCTGGAGCTCCGGCATCACGGCGAACAGGAACACGAGCGCATAGCGCTCGAAGGCGGGCTCGCCGGGCGGCCAGGGGTACTCTTCCTCTCCGCTCGTGCGCAGGTAGTACTCGACGGGGTCGAGATACCCGCGCTCCAGCCAGTCGCCGTCGCGCGCCTCCGCCTCGATCGTCCTCTGTGTCTCCAGCACCCGCGCGGCGAACTCCCGCTTTCGGCACAGCGGACAGACGTGCTCCG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.70,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [30.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 4 420381-423904 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012670.1 Sorangium cellulosum strain So ceGT47 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 420381 36 100.0 35 .................................... CAGCTGCTCAGTCGCGTCACCGTCAGACGCGCTCA 420452 36 100.0 38 .................................... CTCGTGGGGTCGAGCAGCTCCAGCGGATTTCGCCCCAG 420526 36 100.0 35 .................................... GGTCGAGCTCGAGCGCATCAAGCGGCCGGCCATGA 420597 36 100.0 36 .................................... CGCGACGACCTCGCCGCCGTCGAGGCCCAGGCAGCG 420669 36 100.0 37 .................................... CCCATCACGAGCACGCGATTCAGACCTTCAGCCATGA 420742 36 100.0 35 .................................... AGGAGCTTGCTGCGCGAGAGGCGAAGGCCCAGGAG 420813 36 100.0 36 .................................... TCCGGAAGGCGGGCGAGGTCGTGCAAGCCCTCCTGC 420885 36 100.0 35 .................................... GTCGGGCCAAGCAGGCTGGCGACCACCGCGTTGAC 420956 36 100.0 38 .................................... TCCCCGAACACGCGGGCAAAATCGGCCCCGTAGCGACG 421030 36 100.0 36 .................................... GTCGGCGCACGCATCGCACTGGTAGCCGAGCTCGAC 421102 36 100.0 36 .................................... ACGAGCATCGACGGCAACGGGGGGGCCGCTGGAGAC 421174 36 100.0 38 .................................... GTGGGGACCATCGGCGGCTCCCCGGCGAGCGGAATGGT 421248 36 100.0 38 .................................... CAGGCGTGCCGTCGACCTCGAACCCGCAGCCTACGAGC 421322 36 100.0 36 .................................... AGCCGCCCGTCGCCCTTGTACAGCTCCGCCGTGTTC 421394 36 100.0 36 .................................... AAGAGGAACGGTACGTTTGTTGTTCCGTTCTACGCC 421466 36 100.0 36 .................................... CCGTGACCGGGGATGCGGCGGGCGAGCGCTTGACGG 421538 36 100.0 37 .................................... GCGCGCGTGTCGTCGTCGCGCGGGCTGCCGCTCTGGG 421611 36 100.0 36 .................................... ACCGAACTGCACGCACACTTCGGCAAGCCTGTCGTC 421683 36 100.0 36 .................................... CGGCTGACGCGCCTCGGGCGCCTCCGTCCCCTCGGG 421755 36 100.0 35 .................................... GGCAGGTGCACGAGGCGAGCGTTCCAGTCCGCCAC 421826 36 100.0 38 .................................... CCGTATCCGTTGCCGGATCCGTTGCCGTATCCGTTGCC 421900 36 100.0 36 .................................... AGGGAGCACACGGGGACCTGGCGATGGCCCTGGCGC 421972 36 100.0 37 .................................... CGGCGTCTCGCCAGGGGGGTACGTCGGGGAGCCTGGG 422045 36 100.0 36 .................................... ACCGTCCACCCGCTGAACCACGGAGACGGGTCTACG 422117 36 100.0 40 .................................... ATGAGCCGGTCCCGGTACGCGCCGTCGGGCTCATCGATCA 422193 36 100.0 37 .................................... GAGAACACCGGCGAGGTCCAGAGCATCGCCAGCCCCG 422266 36 100.0 35 .................................... AACCGCGTGACGCGGGAGGAAGCGTCTTCGAGCAT 422337 36 100.0 40 .................................... GGAGTATTCGCCAGCTCCGCGCGGCAAAGGTCTCTCCGTC 422413 36 100.0 36 .................................... CTCGCCAAGCTGGCCCTGCAGCTCCTCAAGCTGCAG 422485 36 100.0 37 .................................... CAGCACCCTCTGCCCCGCCGGTTCCGGGTCCGTCTCG 422558 36 100.0 35 .................................... AGGTGATACTCGAAGATCCTCGGGCTTTGCACCCT 422629 36 100.0 36 .................................... TGAGCAGCACGCGAGTGCGCGCCTGCTCGCGGACCA 422701 36 100.0 36 .................................... CCGGCAAACGGAGCCGGGCCCGCAGGTCCGTCATCT 422773 36 100.0 35 .................................... GTCGCGCTCGGGGTCGCCTCGGCGGGCGTCTCGTT 422844 36 100.0 35 .................................... TTCAGGACCTCAAGAATTAGAGCCCTCATCCTATC 422915 36 100.0 36 .................................... CCCTTGGCGACGTCGACGGCGCGCCGCGCCTGCTCG 422987 36 100.0 39 .................................... CCGCCGCCGTATCGGTATCCGTCGCCGTATCCGTTGCTC 423062 36 100.0 39 .................................... CCGGATGCCGCGTACGGGATCGTGGACATCGAGGACGCC 423137 36 100.0 38 .................................... GTGCTCGGGTTCTCGCCACGCCGGAAGAGCCGAAGCTC 423211 36 100.0 38 .................................... CTGGCCCCGGGCGAGCGATACGTGATCGCCGGCCCGGA 423285 36 100.0 37 .................................... CTGAGGAAGGCCGAGGCGAGCGGGGGCGAGGAGGCGT 423358 36 100.0 38 .................................... GGGCTGAACCGGGCGGCGGTTGCGGGGTGGCGCACCCA 423432 36 100.0 38 .................................... CCGTTCAAGGGCTGCACGGTGAGGCATTGATGACCACC 423506 36 100.0 35 .................................... CGCCCCCGGCGCCGCCTCTGCCACGCTGGACGGGC 423577 36 100.0 39 .................................... CATCCATGCCCGCCCGCTGGCGATGAGCCGGGACATCAT 423652 36 100.0 39 .................................... CAGTGGGCGCACGGCTCGCATGGGCGCAGGTCGAGCGAG 423727 36 100.0 35 .................................... GCTGGTCCTTGGCCGCCGTGAGCGAAAACGGCGAG 423798 36 100.0 35 .................................... GCTGGTCCTTGGCCGCCGTGAGCGAAAACGGCGAG 423869 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 49 36 100.0 37 CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Left flank : CGCCCCCTGGCCGGCGGGCGCCGCCCCCGGCTCGGGAGGCGGGCGCCCCGCGGGGGGTGAGGCCCGGGAGGTGGGGGGTGACTCCGGCGAGGTGGGGGGTGACTCCGGCGAGGTGGGGGATGAGCGGGCGGAAGCGGGGACGGCGTGGCGCGAGGTGGGGGGCGAGCGCGGCGAGGCGGGGGCGGCGGCGCAGGAGGTGGGGAGGCGAGCGGCGGAGGTGGGGGAGAGGGCGGCAAAGCGCCGGGGGAGAACGGAAGGGGCTGGGCGAGGGGAGGGGCGGGTATGGTAGAAGGAGGAGGGCGGACCGGTTGCGAGCGGTGGAGTGACGCGAAAAAGCCGGGGACCGCTCGCAGAGCCGGCAGGTGTTTGAAAAGATGAAGGATTTCTGGCCGGCACCGGGGCGCGCGGGGCGCCTCCGGCGGCCGGAGCGGGGGGTCGAACGGGGACCTCTCGCAAACCGGGTTGTAAGTACGCGAAATCTCTCGTAGGCTGCGAGGCCT # Right flank : CTTCGATCCACGCTTCCGATTCCGCATCCGCCTTCTCGAACCGCTGCCCGTCCGCTCGGCGCGCCGCGCCGACGGGCGCGCCGGGCGGACCGCCGCGCGCGCAAGATCGGGGCGATGGCCCCCGCCACGGGCGTGGTGAGCACGCCGCCAGGTCTGCTCGGCCGCTCGTCCACCGGCTGCGGCGGCCCCGCCGGCTGCGGCGGCCCCGCCGGCTGCGGCGGCCCAGGCGAGCGCGCTGCCATCGCCCTCCGCGCGAACGCGGCGCCTCGTCCGCGCGCGCTCGACTGCGCGCTCGCCGGATGCGTGATCGAGCACGGCGCGTCGCGGAGCCGGCCGTCGGGCGCCGCTCCGCGCGTCGCCGCGTACCGTCGCCGCGCACCTCGACGCGGGCCATCTCCCCCGCCGCGCATCTCGGCGCGGGCGACCTCCCCGCGGGCGCACGCAGCCGCGCTCCCCGGTCGAGCCGGCTTCGGCGCTCCCCGGTCGCGCCGGCTTCGCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.70,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 5 1635328-1636533 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012670.1 Sorangium cellulosum strain So ceGT47 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 1635328 36 100.0 37 .................................... CTTATTCGTGCTCTCCGCGAACTGGACCTGATCGGGA 1635401 36 100.0 37 .................................... GTCTGGCTGCCGCCGTGGAGCGCGAGGAGCTCCCGCA 1635474 36 100.0 40 .................................... TAGTCCCCGACACCGACACACACCTCCACGGTGCACGGGT 1635550 36 100.0 37 .................................... AGGTGCGCGACATGATGGGGAGATGGGCAGCTAACCG 1635623 36 100.0 38 .................................... GGGTGCTTCCCCAGATGACGAAGCACCAGCTCCCGCAG 1635697 36 100.0 36 .................................... GTGATGTCGTGCAGGCTCATCCCCGCGGGGACCGTG 1635769 36 100.0 36 .................................... TGTGGGCGGGCGCCGGCGCGGGCGTTGTCCCAGCGA 1635841 36 100.0 37 .................................... CTACTACGATTGAACTTTTCCAGTCAGGTCAGTGCTG 1635914 36 100.0 36 .................................... TCGGGTACGATGTCCGTCGGGTCAAACTCGACCCGT 1635986 36 100.0 36 .................................... TAGAGATAGGTTCGCTTCATGTTTCCTCGCTTGTGT 1636058 36 100.0 38 .................................... GGCGTGCAGGTGGAGGCCGTCTGGTTGCAGACCGAGCA 1636132 36 100.0 37 .................................... TCAGATAGCGGGTGACGTCCGCCGCGCCGTGCTACGC 1636205 36 100.0 38 .................................... TCGGGCAGCCCCGCGCGCCATCGCTCCGGGATGCGCTG 1636279 36 100.0 36 .................................... GCCCTCGGCGCGCGCGGCCTGGTAGAGCAGCGAGCG 1636351 36 100.0 37 .................................... ACGATCGCGCACGGCCGTGTCATGCTCCTCTCATCGA 1636424 36 100.0 38 .................................... AACCCGTGGATCGGGTGCGCGAAGGTGTCACCGGGCTG 1636498 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 17 36 100.0 37 CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Left flank : CGTCCCCATCCTTTGCGGCCACGATGAACCGCAAGCGTTCGTCCACGACAGAGCATTCCTTCCAGGGCATCGGCGGGTCTCCGTGACCTGCCTCCTGCCGGACCTGGACCTGTCACCCAGGCTCCCGGTCTGCCCTGTCACCCAGGTACCCGGTCTGAACCGGGCGAGCGCGGTCCTCCGGCGAGGGGGCGCAGGAGGTCGCATGGCGAGCGGCGGAGGCGAAGGAGAGGGCGGCAAGATACCAGCGGAGAACGGAAGGGGCTGGGCAAGGAGAGGCGGAGGCATGTAGAAGGAGGAGGGCGGACCCGCCGCGAGCGGTGGAGTGACGCGAAAATCCCGGGGGGCGCTCGCAGAGCAGGTAGGTGTTTGAAATAACGTAAGATTTTGAGATGACGCGGAGGGTCGCGGGGCGCCTCCGGTCGCCGGAGCGGGGGGTGAAACGGGAACCTCTCGCAAACCGGGTTGTAAGTGCGCGAAATGTCTCGTAGGCTGCGAGACCT # Right flank : CGAGGATCGGAGTCGGCTGATGTTGGCGTTCAGGACCTGACAGATCCCCTCATTTTATACGGCAAATTCGTCGATTCCCGCGCCGCTGGCACACCGCTTCCACTGAGCACCAATGTGGGACAGTTGTTTGCATGGGCCCACGAGGCTCAGGTGTTTCGGGTGAGCCTACGACGAATACGTGAGAATCTGCGGTCGCTGGCCGGAATAGTATCAGTATGAGGCAATCGGCGGGCGTCGACGCGTGCACGGAAGGCAAGGCGAAGGGGAACTTGACGACGACGCGCTCGGAGGAGCGGTCGCATTCGATGAGGGCTCGCAGGCAACTCGAGCGCGTAGGGCTCAGCGCGAGTAGCATCGAGCGGTTCCTTCACGCCGCTGTGAAAGTCGACCTGCACGTCAAGACCGTGCTGTCCTTGTCGCTGGCAACCCTGGGCGTTCTGCACTCGGTCTCCCTTTGCATTCACGTGATCGGGCGAGGGATGGCGTGGGCAAGAGACGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.70,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 6 1639075-1639771 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012670.1 Sorangium cellulosum strain So ceGT47 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 1639075 36 100.0 37 .................................... ATCCCGTTGACTAGAGCCTTTTGGCCCGCTTCCGTCG 1639148 36 100.0 39 .................................... CTCGGCCTTGGGTGCCATCCGCCGCAGGCGCCGCTCCAG 1639223 36 100.0 37 .................................... TAGCAAAACAACTCGTCCCGCAGCGCCGCCGCTTCCG 1639296 36 100.0 35 .................................... GCGGGGTCAGGCGCCGCCGGCCGCGCGATTCTCAG 1639367 36 100.0 36 .................................... TCGTTCCCGCTCGCGGATCTCTCCGAGCCCGGCGAC 1639439 36 100.0 39 .................................... CTCGCCCAGCTCTCCGAGGAAGCCGGCGCGACGGGCGAG 1639514 36 100.0 39 .................................... CTCGCCCAGCTCTCCGAGGAAGCCGGCGCGACGGGCGAG 1639589 36 100.0 38 .................................... GACGTTCCAGCCATTATCGGGCTCCGAGATGAGGGCCA 1639663 36 100.0 37 .................................... TTCCTCTGCGCGCTTCCGGATGCGCATGTTGCGCATG 1639736 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 10 36 100.0 38 CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Left flank : TTCCCAAGGAATCCCCGTTTTCAGCACGAACAAGATCCCCGTCAGGGCGATTCGATCAGGCGTGCGCGGCCGGCCGCCCTGCGGCTTCGGCTCCGCCTTCGGCAATAGAGGTTCGATTCGCTCCCAGAGTTCGTCCGGCACCAACAGCTTGCCCACGCGTGCAATCTAATGCGCGTACCGTTTGTCTCAAGCGAGCGGGCGCTCGAGCGAGGTCGGCGGGCTATTGTTAGGCGCTCTTATAGCTGCCTTTGCGCACGTGCTCCTGACGCTCCTTGGGGAGGCAGGAGAACGGGCCGGCCTCGATCGCCTCCTGAAGACCAATACCGTGAAGCATCGAACCTTGTCGCTCTATAACCAGGGATGCTACTGGTACACAGCCATTCCCAACATGCGGGAAGAGCGGCTTGTTCAACTCATGACAGCGTACGGCGAGGTGCTCCGTGAGCACGCCGTAACCCGTGAAATTCTTGGGACTATATGAGGGGATGCATCAGGTCGGC # Right flank : CACCAGGTCGCTGACGTGTGTCGCTGTGATTGAAGAGGCCTCTCCGCCGCTGAAAGGCGGCCCTCTGTGCCAACGTCGGGTGAGACAAGCTGCCCCTGGAAATCTGTGATGAGAGGGCGGAGAATGGACCTGACCCGTGCCGAAGCCTTCCCATCTCCGATCCGTCGATCCTACCCCCGCCCCAGCGGCGCAGGGCGCTGCTCCCCGCCCGAGTGGCGCCGCCGTCGAGAGCGTGCCGAAGCCGGGCAAGAGGCGGAAGTTCTCGGCGGCGGAGAAGCTGCGCATCGTTCGCGAGGCGGCCGCGTGCACCCAGCGCGGGGACATCGAGGCGCTGCTGCGCCGCGAGGGCATCTACAGCTCCCTCCTGGCGGCGTGGCGCAAGCAGCTCGCCCTCCACGGCAGCGAGGCTCTCGCGGAGCGCAAGCCCGGCCGCAAGCCGAAGCAGGACGCCAAGGACCGGCGCATCGCCGAGCTCGAGAAGCGCTCGGCGCGGCTCGAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.70,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 7 1641591-1641842 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012670.1 Sorangium cellulosum strain So ceGT47 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ========================================= ================== 1641591 34 100.0 38 .................................. GCCAGTCTCTTGCGAGTGCCATGTCCGATGCGTCCTTT 1641663 34 100.0 37 .................................. ACGACGACGGCACGGCGGGCCCGCGCATCACCCTGAG 1641734 34 97.1 41 .........A........................ GCGTCCGCAACAGACGGGTGGTGTGCTCCACGCCCTCCAGA 1641809 34 76.5 0 .......TT..C...CT...C....T....C... | ========== ====== ====== ====== ================================== ========================================= ================== 4 34 93.4 39 CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAA # Left flank : GATCGCTTTGCATCGCTGACTCATGCACAAGCGTGGTGCCAGGAGTTCTTCGGCTGGTATAACGACCTTCATCAGCATTCTGGCCTTGCGCTCTTCACACCTGCTGATGTATTCTACGGCCGCGTTGAAGACATCGCGGCCCGTCGACAGGTCGCCCTCGATGCGGCCTACGCTGCGCATCCTGAACGCTTCCCGAACGGTCCGCCCGTCGTACGCAGGCCGCCTGCCTCGGTCGCCATCAACCCGCTGTCCGTAGACGACGCTGCCGGCGAGGCCGCTGCGCCGCCGCACACGGGCACGACCAGCGACGCGCCCGAGCCTGGCGCCACGCCCGCCGCCGCGGCGCGACCTCTGCCGCTCACGTCCCAGAGCCGGAACGCGCCCCTCTGCGCGATCCACTCATAGGATTCTCGTCCGGCCTGTCTCAAACCTGTTGGCATTTTCCGCGGCGGCCCCATTGAAGCTTGTCCACGCCCACGCTGAAGAGCATGTTGCCCGGC # Right flank : AGCTCAGAACGCCCACGTCCACGTGAACATCGCCGGCTCCGCCTCCGGCGCCCGCGGCAGCGTGCTGGCCGCATGGGACGCCTCGATCGGCCGGATCGGGTGGAGGGCCGCGATCACGAAGCCCGTCACGTGCCCCAGGATCATGCCGGCGCTGACGTCCTGCCACGAGTGCGCGCTCGCGCCGATCCGCAGCGCCATGGTCGCCAGCGTAGCCGCCTCGGCCAGGGCGAACGCGGCGAGCCGCAGCGAGGCGTCGCCGGTCGTGCGCAACACGAGCTGCAGGCGCACCGCCTCGAACGCCCGGTCAGGCGCCGCCGCGCCCCCCCTGCGCTGCGGCTCCCGTGGTCCACGCCAGCACGCACAGGCAGGCGCGCGGCGCGGCGCGCCTACGGTGTCTTGGCCGCGGGCGGCTTGGCCTGCGGCTGCGCGGGCGCCGCGGGCGCCGCAGCCTTGTCGGCCTGCTGCGCAGGCCCCGCCGGCGCCGCAGCCTTGCCGGCCTG # Questionable array : NO Score: 5.53 # Score Detail : 1:0, 2:3, 3:0, 4:0.67, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.70,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [35.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 8 9190448-9186842 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012670.1 Sorangium cellulosum strain So ceGT47 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 9190447 36 100.0 39 .................................... TAGTCATCAGGCGCGTCGTACTTGGAGAACTCTCTCCGC 9190372 36 100.0 35 .................................... GCCGCCTCCACGGAGGCGTACCACGTATCGGCCCA 9190301 36 100.0 37 .................................... GATCGCCGTCCAGCCCGTGATCCGCACCGTCGTCATC 9190228 36 100.0 37 .................................... AGTCCTTTCAGGCGTTCATCCGGCGCCCGGCCGTGTC 9190155 36 100.0 37 .................................... GGGGAGGTCGAATGCCTCGCAGAGTTGGCGACTGGCC 9190082 36 100.0 37 .................................... GCCGCCGATCGGGGGCTCGTTGATCCCGAACGCCGCC 9190009 36 100.0 35 .................................... ACAGGGAGGGGGGGATATGGCGGGGTGGGGGGGTG 9189938 36 100.0 37 .................................... AGGAACGCGAACCCGCCGGCTGTCAGTGGCACCCGGA 9189865 36 100.0 35 .................................... TCCGAAGCTACGGCTGTCCTGATCTCGTAAACAAT 9189794 36 100.0 35 .................................... AGGTCCTCCACCGCCGTGTACGGCGGCGATGCGGC 9189723 36 100.0 38 .................................... TTGCTGACCCCACCCGCCCCGATCCGCTCGTGCAGTGC 9189649 36 100.0 36 .................................... CGGTACCACGCAGCGCCGATCGAACGCGCCCACGAG 9189577 36 100.0 40 .................................... GAGCCGGGGGCGCGTGTGGCGTGGGACAGCAGCGCGGTGG 9189501 36 100.0 35 .................................... CTGCGGCGGGCGGTCATCGTGTCTGCCCTCCGAGC 9189430 36 100.0 39 .................................... GGCCGCTTCGGGAGCGCGACCGCCATCGCCACCGCGTGC 9189355 36 100.0 37 .................................... CTTTCCGGCCAGTACCTGACCTGACCCAAGGTTACCA 9189282 36 100.0 36 .................................... CGTCGGCCGCGCCCGTGGACGACTAGCGACGACGAG 9189210 36 100.0 35 .................................... ATCTCCACGCTGAGCACCGGATCACCCGCGTTGTA 9189139 36 100.0 37 .................................... CGCGCGTCGGCCGCTACGGCACCAGCGGCACGCCCGC 9189066 36 100.0 35 .................................... AAGGGGAGGCTGCCCGCAGTGAATCCCGCGACGTT 9188995 36 100.0 38 .................................... GGATGTGATCTGCGCTGTGCCCGCGAGCACATCCGTCA 9188921 36 100.0 39 .................................... TTACGATACCAGGGCGATTCAATCAACGTGCGCGTGCGT 9188846 36 100.0 36 .................................... GAGCTCACGTAGAGTGCGAAGTTCATGCGTCCTCTC 9188774 36 100.0 38 .................................... ATTCCGCGCGCGCCCGGCTCGTGCGGGGCCCAGATCCG 9188700 36 100.0 35 .................................... ACGGCGAACGTCGCGTCGGCGGACGAGGAGGAGAT 9188629 36 100.0 36 .................................... GGCAGCTTCGCATAGCCGTCTCCGGCCACTTGCCAT 9188557 36 100.0 37 .................................... CACGGGCTCCGCGGCCTCTTCGTCCAGACCCTGCGCG 9188484 36 100.0 37 .................................... CACGTCGGGCAGTTCTTCGGCTCGACGTGAGTAGCTG 9188411 36 100.0 38 .................................... CGGTCGGCTGCTGCCGCCGCAAGCTCTGCGATGTGATT 9188337 36 100.0 35 .................................... AACGCCGTCGCGCTTGCGCCCAGCTTCGCCATCTG 9188266 36 100.0 37 .................................... AACCATAAGCTCAAAAATTGATCCTTCCCAATGACTC 9188193 36 100.0 38 .................................... TCCACAGGCCCAGCCGAGGTTGTACGCCGCCAGAGCGC 9188119 36 100.0 37 .................................... ACGTGGATCCCTTCCTCGGCCGCGAGCTCGGCCGCGC 9188046 36 97.2 37 ......................C............. AACGGACTCAACCCCCCACGTGGCAAGCTCCCATCTC 9187973 36 100.0 35 .................................... CTGAGCACCGTCGACGGGGCGACGTTCGTCGCGAG 9187902 36 100.0 35 .................................... TGCCTCTGGCTCCGCCGGTGCTACATGGGGTCCTC 9187831 36 100.0 36 .................................... GCTGTCTCCGGCGGTGCCGTTCGTCCGCCATCACTG 9187759 36 100.0 36 .................................... TGGTCAGCCGGCGCGCCTGCTCGACGAGCGTCCGCT 9187687 36 100.0 37 .................................... GGATGCTCGAGGCGATCGTGCTGGTGAGCGAAGAGGG 9187614 36 100.0 38 .................................... GCGGCGCCATAGGGCGCGTCGAGGAAGACGCCCGTGAG 9187540 36 97.2 39 ...............G.................... GTTTCTGGGGTTGGAGCCCGAGAAGAGGGAATGGCGAGC 9187465 36 94.4 36 ..TG................................ GATGAGCGTGAGGCTACCGCCCACATCGGCCGGTGC 9187393 36 100.0 38 .................................... ATACCCCGCTGGCGCTCATTGGCGCACGGGTCGAGCCA 9187319 36 100.0 37 .................................... GCGTAGGCCCACGGCCAGCTCGTAGACCCGTCGCCAC 9187246 36 100.0 39 .................................... TTGAAGTAGGGGACCTGGATGGTCTCGCCGCCCTTGAGC 9187171 36 100.0 38 .................................... CGGCGGCGTGGTCGCGGACCACGTCATCCGAAGGGTGC 9187097 36 100.0 38 .................................... GGTGTCCCCTTTCTCGCCACCTTCCCGGCGGCCTTCTT 9187023 36 100.0 35 .................................... ACGCAGGCACCCGGGAGGGCGGCGCGGATCTGCTC 9186952 36 100.0 39 .................................... GCTAGCCCTTCCCGTACCCTGTACGCTGTCGCCTGATTT 9186877 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 50 36 99.8 37 CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Left flank : GGATGATGAAGAGCGGATCCCCCTGGCCGGCGGGCTCCGGCCTCGGCCCGGAAGGTGGGAGCCCCGAGGGGGATGAGCACATCCGGTGAGGTGGGGGAGGGTGAAGTGGGGGGAGGACGAGGCAGCGGACGGACAGGACGGCGTGAGCCGGGGGACGAACCCGGGCGAGGTGGGGGATCAGGGGACGGAGGCGGCAGGGCGAGCGGCGGCGGAGGGGAGGGGGAGATGGAGGCACAGCGCCGGAGGAGAACGGAAGGGGCTGGGCGAGGGAGGGGGTGGGCATGGTAGTAAGGAGGAGGGCGGACCGGCTGCGAGCGGTGGAGTGACGCCAAAAACCCGGGGGGCGCTCGCAAGGCCGGTAGATGTTTGAAATGATGGAGGATTTCGAGAGGATACGGGGGCCCGCGGGGCGCCTCCGACCCCCGGAGCGGGGGGTGGAACGGGAACCTCTCGCAAACCGGGTTGTAAGTGCGCGAAAAGTCTCGTAAGCTGCGAGACCT # Right flank : GCTAGCCCTTCCCGTACTGCCGCATCAACCACCCGCCGGGCGATGGATTCCCGGCTCCGCGAAGAACAAGGGGATCCCTCAGGATAGAAAGGTGAGTTCCCTCTCCCGTGCGTTCGTTGCGCCCTCGCGGTCGCCTCTCCTCGGCTCAGCGCCGCCCGCCGCCCGCCGGCGCGGGCGCGCCGCCCGCCGGCGCGCCGTTCGCCGCCCCGCCCGCCGAGAGGCGCTGGATGCACAGCCTGAGACCCGCCCGCAGGTTCCCCCTCGTCGCGATCCCCGACAGATCCAGCCCCAGCGCCACCATCGTCTGCGCCACGTTCGGCCGGATCCCCGTGATGACCCCCTCCGCGCCCAGGAGCCGGATCGCGCGGACCAGCTCGATGAGATAACTCGCCGTCTTCGTGTCGACCAGCTCGACGCCCGTGAGGTCCAGGATCGCGAACCGAGCCTGCTTGTCCACGATGGCCGCCAGCAGGCTGTCCATCACCTCGGCGGCCCGCTGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-11.20,-13.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //