Array 1 198391-198889 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI913085.1 Enterococcus faecalis EnGen0424 adiGo-supercont-complete, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 198391 37 97.3 29 ....................................A TCATCTTCTGCAAACACTTGTTCATATTC 198457 37 97.3 29 ....................................A AATGGTAGAATTTTAAGCATTCCTCATTT 198523 37 100.0 29 ..................................... TTGCAAGCTGATGCATCCCTTTATTAGTT 198589 37 97.3 29 ....................................T GGATCACCTAGTTTGTATTCGCCAGTTTA 198655 37 97.3 29 ....................................T GTTGCTCGTGTCACTACGCAAAATGCAAA 198721 37 100.0 29 ..................................... TAGCCGAATCCACACTGGATAGCAATACT 198787 37 100.0 29 ..................................... TTGCTGCTAGATGTCGTGTTGGCCAGCCA 198853 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ============================= ================== 8 37 98.3 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACC # Left flank : CACAATTAAATGATAAACCAGAAGTCAAATCAATGATTGAGAAGTTAACTGGAACAATTAGTCAATTAATTGGCTATGAATTGTTGGAACATGAAATGGATTTGGAAGAAGATGGCATCACTGTGCAGGAACTTTTCAAAGCTCTTGGAATCAAAATCGAAACAACGAGTGATACGATTTTTGAAAAAGTTATGGAAATTACACAAGTACATCGTTATTTATCAAAGAAAAAATTATTGATTTTTATTAATGCGTGTACGTATTTAACAGAGGATGAAGTGCAACAAGTGGTAGAATATATCTCTTTAAATAATGTGGATGTCCTGTTTTTAGAACAAAGGGTGGTCCAGAACAGATTCCAATATATTTTGGACGAAAACTTTTATTTGAGTTATGAAAAAGCTTAAATTGTTATTGATTAGTGGTTCATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAGTACGGAACTTTGGAGAAAAAATAATTCTCCGAG # Right flank : TTGCGGTATTATTCGTAGGTTTGCTTTTTTGTTTTAGAATCATGTTGTTTAGTTTTCGCAAATACGATATGATTGATGTAAAAATATCGTTAATATGTATAAATGTGATTGTTATATAAAAAATATAAGTAATAAATTGAAGCTTTGCTAGAGCAAGTGATGCGATTACGAAATTATTTAATTTTAGAGTCACGTTATTTATTACTTTACGAATAGAGAGTACGATTAGTTAAATATTTAGTTTTACAGCTATGTTGTTATTATATGTGTTGAACGAAGTTATTGATTTTAAAAGTAGTTGTTCCTCCTTTTTTTATATGCTACAATTTTTCTATATTAATCATTAGTTAAATATTTAAGGAGGTGATTATAATAAGAAGGAAAGGATTTAACAAAATAAAAAAAGAAATGGAATATGTTAAAGTAGTTACGAATTTACTAATGGTATCAAAATTTTTTACGCTACAGTCCGATGAAGATTTACATACATTAACTCTGTT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 1439698-1438604 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI913085.1 Enterococcus faecalis EnGen0424 adiGo-supercont-complete, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================== ================== 1439697 37 97.3 29 ....................................G TTTGCTGGATTAGCTAAATCTACATTGGT 1439631 37 97.3 29 ....................................G TTCAGCATCTGGCACAGAGTATTGGGATA 1439565 37 100.0 29 ..................................... GCATTAACTAAAGAACGGCGCATACCGAT 1439499 37 100.0 29 ..................................... ATATCAAAAAATAAAATATTTGGCCGCTT 1439433 37 97.3 29 ....................................T AGTGTGTTAAATTTTATAAAATTAAGCCC 1439367 37 97.3 29 ....................................G AAGAAATTTTAGCACGCAAAGCGAATGGA 1439301 37 97.3 29 ....................................T ACTGAATCTAGTTCACCATCTGTATTATC 1439235 37 97.3 29 ....................................C TTTGCTTTGTTTTGCATCGTCTTCGCTGA 1439169 37 100.0 29 ..................................... TGAGGATGCTTCTTTATAATGAAAAACTT 1439103 37 97.3 29 ....................................T GGAAAGCATGCTATAATCATTATTAGCAA 1439037 37 100.0 29 ..................................... TCAAGCGACTGAAGCTAGAGTAACTAAAA 1438971 37 97.3 29 ....................G................ ACAAACGTTTCCTGAATTGGTTTTAGGAT 1438905 37 97.3 29 ....................G................ AGTTTAGAGCAAGAGATCAAAGAGGTAAC 1438839 37 94.6 29 ....................G...............T GCTTTTACATCTTTGGAAGGATTACTACC 1438773 37 91.9 30 ....................G....T..........T TAATTTTTCGACAGTCGAGAAATTCCTTTG 1438706 37 97.3 29 ....................................C TGCCAGATTTCAGAGCGGATGAGCTGCCT 1438640 37 67.6 0 ......T..C.........A.A..ACAA..T.TC..C | ========== ====== ====== ====== ===================================== ============================== ================== 17 37 95.7 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Left flank : CATATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTTGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACTTTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTATAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAAACCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATACTTCTCCGAG # Right flank : TCAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCAATTTTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGTAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAATCCAATTTGCGATGACAACAGTTTTCCACTTTTTCTTCGTACCGTTTTCAATAGGATTAGCACTTGT # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.37, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //