Array 1 50459-55713 **** Predicted by CRISPRDetect 2.4 *** >NZ_LTCC01000006.1 Moraxella sp. RCAD0137 ZB100005, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 50459 28 100.0 32 ............................ TTAATCGTTTGGAAAGGTTCTAGTACACGATT 50519 28 100.0 32 ............................ GCAAATGCCTAACGCTAAAGTGGATGCCAACC 50579 28 100.0 33 ............................ AATTTGATTAACCAATTTTTTTACATAGTTATC 50640 28 100.0 32 ............................ GATTTTTGACAAAAACGGCAAGATTGCAAAGG 50700 28 100.0 32 ............................ ACTTTATCAGCAAACAAGCTAAAATTAATAAA 50760 28 100.0 32 ............................ GTCTGTCGATTTGCCCAGCTGTGCTTTTTTCG 50820 28 100.0 32 ............................ TCATAGCCATTTAGCAGCTGAAAATAAGCGAT 50880 28 100.0 33 ............................ GAGCTAACCAAATGCAAATGCTAGGCGGTCAGC 50941 28 100.0 32 ............................ AGTTTTTCTACCACGCCCTTGGCAGTGGTGGA 51001 28 100.0 32 ............................ AAAAGCGGAATTTTACACCAATTTTTACAAGG 51061 28 100.0 32 ............................ GCTAATAAATACTTGCGAGCCCTTGGCAAGAT 51121 28 100.0 32 ............................ GCCTAGCATTTGCATTTGGTTAGCTCGGATTT 51181 28 100.0 32 ............................ AATGCAACAGCAAGAGCAACGATACGCAACCC 51241 28 100.0 32 ............................ TTTACGCAGGTACTGCTGTGCAATTTCTGCCA 51301 28 100.0 32 ............................ CGTTTGGGGTTTTGTTTATCCCATTACAATGA 51361 28 100.0 33 ............................ AATGCCAAAAGCCCATAAATAAGCAAAGGCATA 51422 28 100.0 33 ............................ ATTTGCGTGTGTGGATTGAGCCTTCGATATACA 51483 28 100.0 32 ............................ ATTGAGACATCGACCAAATCGATCTCATGGGC 51543 28 100.0 32 ............................ AACAAATCGCAAAAGATAATAATTGTGTTTTA 51603 28 100.0 32 ............................ AATAGTGTTACCATCACCGTTACCATCGTTAC 51663 28 100.0 32 ............................ AATTAAAATAGTGGCGCATGAATTGAAATTCA 51723 28 100.0 32 ............................ GATGGCACACCGCCAGCATATAGGCGATTTGC 51783 28 100.0 32 ............................ TTGCGTGGCTTATTGCGTTTCTTTTTAGCCAT 51843 28 100.0 32 ............................ AATGCAACTGCCCATAGCTGAGCTGTCTGTAA 51903 28 100.0 32 ............................ TAATCGAGCTTAAAAACCAAAAGCAAAAGCGA 51963 28 100.0 32 ............................ TGCCAAGATTTGGTTGCCGATACCGCCGCCGA 52023 28 100.0 33 ............................ GTATGGATGCCATCACTGATACACGCAGTCTAT 52084 28 100.0 33 ............................ ACTCAATGCCAATTTGGTTGCCAAATTTATTTT 52145 28 100.0 32 ............................ AAGCTCAGCGACTTTGCAAAAGATGCCCTAGA 52205 28 100.0 32 ............................ GCACATTTACAAAGAGCCTGAACAGGGAGCAG 52265 28 100.0 32 ............................ ATGATACTCAAGCGGAAATTGCATTGAGCCAC 52325 28 100.0 32 ............................ TGCCCTGTTGCATCGCTGATTTGCTTAACCCA 52385 28 100.0 32 ............................ CTAGTGCCAAAAGATGTAATTTTAGACTTATC 52445 28 100.0 32 ............................ TGTGGTTTATAGAATACATCAGGCGAATAATT 52505 28 100.0 32 ............................ ACTTATCAAATGAGCCTATATAGCGAGCGCAT 52565 28 100.0 32 ............................ AAAGTGAGAGCGTGTAAGGGTGTTGTAGAGCC 52625 28 100.0 32 ............................ AAATTTTTTGGCATCTCTTCGCCAAACTTGGA 52685 28 100.0 32 ............................ ATCTACTGCGATAGGGAAGAATTCATGAACAT 52745 28 100.0 32 ............................ CATAAAAGAGCGTTTAAGCATGGCGTAAATAT 52805 28 100.0 32 ............................ AATATGGTTGACCAGTTTTTTCACATAGTTAT 52865 28 100.0 32 ............................ GAACACTTGTGCAGATTTGACGATGAAGTCCA 52925 28 100.0 32 ............................ TGCAAAATCTCTTTTTCTTCATCGGTCAATGT 52985 28 100.0 32 ............................ AAAGCGAAATTGCCGAGCGCTTGGATGTTCAT 53045 28 100.0 32 ............................ TTTGTAAGGTACAATGTAGGCAAATCCCAAAT 53105 28 100.0 32 ............................ ATCATCTTGCATTGACTTTAGCACCTTGTATC 53165 28 100.0 32 ............................ ATCGAAAGCTAGACCAGTACAAGGGCAAAAGC 53225 28 100.0 32 ............................ ATCGTCATTTGCAGGCGTGGTGGAGCGGTGAG 53285 28 100.0 32 ............................ GTGACTGTAACGGCTCTCTGTCGCATCAAGAT 53345 28 100.0 33 ............................ TGTTCTACTGTTAATAGTTTAATTCACGCCACA 53406 28 100.0 32 ............................ AGCTTTTATTCTCTTGTGCAACTGGCAAATCC 53466 28 100.0 32 ............................ TACAGCTGCCAAATCAGATACCAATTTTTTAC 53526 28 100.0 32 ............................ TTGATTGTCTTGCCATTTGCGTGTGTGGATTG 53586 28 100.0 32 ............................ TTTGTCTTTCACTGAACGCCAAGTAAAAGAAA 53646 28 100.0 32 ............................ TGCATTACCATCATCATGCTAGACTTTAAGCG 53706 28 100.0 32 ............................ TTGTTGCGGTGCTTGTTGCATTGGTTGCTGAT 53766 28 100.0 32 ............................ AATATCTACAACATTAGAAAGGTCTTCATTGA 53826 28 100.0 32 ............................ TAAATCGTGTAAATGCTTTAAAATATCCCTAT 53886 28 100.0 32 ............................ TTATCGCCAGCTTTAAACTTTTTCATAATAAA 53946 28 100.0 32 ............................ TACCATCGATAGTAAAGAACTCTCCATCTACT 54006 28 100.0 32 ............................ ATACTCTAAAATCAGCATTTCAGCAATACCCA 54066 28 100.0 32 ............................ TTAAACTCTGATATAAACTTTGCCCAATTTTC 54126 28 100.0 32 ............................ AACACTTCTTGGGTTACGCCATTAATCAATTC 54186 28 100.0 32 ............................ TTGCTAATGTCAGCATTAAAATAGTTCACCCA 54246 28 100.0 32 ............................ ATTAAAGACAAGTCAGATGGTATAATTGGATT 54306 28 100.0 32 ............................ TAAATCATCAGCAAAAGATGCAATATCCAAAC 54366 28 100.0 32 ............................ TCACTCACCCAGCATAGCACGCACACATCCCC 54426 28 100.0 32 ............................ ACAAGATGCCATCTTGGACTTATCAAAAACAG 54486 28 100.0 32 ............................ ATGCAAAACGAAAAACGACGCTTACGCCTATC 54546 28 100.0 32 ............................ AATCACCGCCAATCGGTCAAAAGCACGACACA 54606 28 100.0 32 ............................ AAGGAGATTTTACGATGAAACAACTAACCGCA 54666 28 100.0 32 ............................ AAATTCGGTGTTAATAATTCTCTGAACTTCTT 54726 28 100.0 32 ............................ TGTGGATGTCGCACATGCTAACTGGGGAGAGT 54786 28 100.0 32 ............................ TTATCAAAAGGATTGCCGTGCTTGTCATAGCC 54846 28 100.0 32 ............................ TGTATCAGCTCATCACAAAACGCATTAAAGCT 54906 28 100.0 32 ............................ ACATTGGCGTGCTGGCGAACATCAAAGATGAA 54966 28 100.0 32 ............................ ACTAGACATCATTAAGCAGCATTGTCGCATTG 55026 28 100.0 32 ............................ TAGGCGCGCAAATCTTTGACCGTCAGCTGTCT 55086 28 100.0 32 ............................ TCATGGTTGGTGGTTTGCCAAAATTGATATTC 55146 28 100.0 32 ............................ ACCGAGATTGAGGGCGTTGGCACGGTTTTTAT 55206 28 100.0 32 ............................ ATTTATCAAGGCTATAGCCGATGGATAGGCCA 55266 28 100.0 32 ............................ CTGCCAAAAAGGCACAGTTTCATGACTTGGCA 55326 28 100.0 32 ............................ CAATGTGCAAGTGCTACAGCCAGCACCACCGA 55386 28 100.0 32 ............................ ACCAATATTGTCCCAAGATCTCGATATTGTCA 55446 28 100.0 32 ............................ AGATGCCGAATAATGGTGATAACAGCGGTCGA 55506 28 100.0 32 ............................ TGTATCTTGGTACATCAGCTCAGTCATATACT 55566 28 100.0 32 ............................ TTTGTATGTACCAGAGGCGCAAAACCCCAAAG 55626 28 100.0 32 ............................ TTGCATGACATCAGCTTGTAGCTGACTTGCTA 55686 28 92.9 0 ..........................CC | ========== ====== ====== ====== ============================ ================================= ================== 88 28 99.9 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : CGCATGGCGGCTTGGGTGATGGATGTCCCTGTGCCAAGCAAAATGCAGGTGGTGTTGGCGATGGGGATATTATAATAATGATTTTCGTATTTGGTTTCGGTCAGATACAGCACACGACCGTCTTTTTGCATCACACGGCAATGTTCTAGGTAAAAGATATTGGCGCGTTTTGAGTGCAAAATCGCTTTGAGATCCTTGGGTTTGAGCGTATCCATGGCGTCAATTTCCTTGATGATGAATTTAATTTAATCACACTCATTGTAGCCTGTCAAGCGATGATGTGATCAAATGATAAGCTTACATTTTTCATCTGCCACATCACTTATGCTATACTAAATTTGCCGTCAAATGATGATGGATGTAAAAAAACCTTTATTTTTTCAACTATTTAAAAACTTAATAAAATCAATAAGTTATAACTAGTCAAATTTTGATTGGGTAAAAAGGGTCAATCCATCATAAATGACTGTTATTTCTTAATTTTTTCGGTTATAATTACT # Right flank : CCTATTAAGCATCGGCTTTTTGATAGCATCTACTTCAGTCTGTAAATGACAAGCCGTCAAACCAAAATCAATGATGTGTCAGCCATTCCAACAGATTTGATTAGTGCCACAAGTCAACAATTGAGTTAGCATCAGCGCACAAAGCTATCACACTTTGTGCTACAATCAAGCTAAATCATTTTTGGCCACGCATATGTACAGCATTAAAATCAACGGCAATACTGTCAAACAAACCGACAAATCAACTGTCGCATGGTCTTTGTATCGTGCGACAGCCAGGCTTTTTGAAAATAAGCCGAATCATGTGCAACTATATAGCGATGCCGAATTGTTGCACCAAAAGCCAAGCGGTCTAATGCTGCTGGAGCATCCCGACAGTGCCGCGGTGAATGATGTCTTGATGACGCTCGTTAAGACGCTGGATTTAAGTTTTCCAGAAGTCAAATCGCTGATTAAAGATAGTGAGCTTGAGCTGTCAAACAGTCGTATTGATGGCTGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //