Array 1 40973-37826 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADZGW010000038.1 Shewanella algae strain A93 A93_38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 40972 28 100.0 32 ............................ CTGCCGGGGCGAACTTCGCCACCAGTATCACC 40912 28 100.0 32 ............................ AATGATGGCTCTAGGAAAATCTATTATACAAA 40852 28 100.0 32 ............................ ACTGATAGCCAGCGCTCTTCACAGGTCATTGT 40792 28 100.0 32 ............................ ATCGCGCAGATCATCGAATGGCGGAAACTCCA 40732 28 100.0 32 ............................ GACTTCACTGACGAAGAAGGCCGCGCTGGTTG 40672 28 100.0 32 ............................ ACTCAGTGGAGCAATCCGGCGAGCGAATGAAT 40612 28 100.0 32 ............................ TCAACATAATCACTACCTCAAATTGTGCGCAT 40552 28 100.0 32 ............................ AGATATGGAAATATAGCATTTAAAAGAATTAG 40492 28 100.0 32 ............................ ACAAAGATGGCAAGTTGCCTGGTGAGCTTTTT 40432 28 100.0 32 ............................ TGATAGACGGCGGTAAAGCTGACATAGCATTC 40372 28 100.0 32 ............................ ATGAGTAGAGCAGACAGACAGGCGGCGAAGTT 40312 28 100.0 32 ............................ ATAATTGCAATGCGCTCACTGTTTGGCATGTC 40252 28 100.0 32 ............................ TATCGCGGCCTAGCTGATTTAGCTGTTGAGTC 40192 28 100.0 32 ............................ TTTTGCATCAGTAAAATAATCAGGATTGTTAA 40132 28 100.0 32 ............................ AATAGTTCCTGTGGTAAATGCGCACGGCGTCA 40072 28 100.0 32 ............................ TCTACCGCAAAGGCACTGCGGATTTCCTTTTC 40012 28 100.0 32 ............................ TCTTTGGGATCGAAGCGACTGAGTACCTGCGC 39952 28 100.0 32 ............................ GTTTCCTGGGCAACAGTTGCAATGCGCCACTG 39892 28 100.0 32 ............................ TAATTAAAAAGCCAATATCACATAGAGCATCA 39832 28 100.0 32 ............................ ACACTCTAAGCCCCAGTTCCCGCTCTGCCAGT 39772 28 100.0 32 ............................ TTGCAGAAGTTCAGGTTCAGGCATTACACCTC 39712 28 100.0 32 ............................ GTAACTATTTGACTGGCCATCTTGATCTCCGG 39652 28 100.0 32 ............................ TGATATACAGTTCACTCGCAAGCCAGCAAATC 39592 28 100.0 32 ............................ AAAGAAGCAATTATCAGCGGTGATAATTGCTG 39532 28 96.4 32 .........................G.. ATTTTCACCACGTTCCCAAACCTCAGTAGGTC 39472 28 100.0 33 ............................ TCTCTCGTTGGTCATGCCTCAATTATAACTTTT 39411 28 100.0 32 ............................ ACCTGGGTAGTTCCCGATTGTCATATCAGTAG 39351 28 100.0 32 ............................ ATGTCTGAATGTCGAGATTCAAGCTCACACAG 39291 28 100.0 32 ............................ CTACGCTTACGTCTGTGCGCTTGATGCTTATC 39231 28 100.0 32 ............................ ATGCTATTGAGCATTTCCACCAGTTCCGCTTT 39171 28 96.4 31 ........................A... TATGGACACCACATTGCTCTAGGCGTGGAGA 39112 28 100.0 32 ............................ TTTTTGACATTTCCAAGACTGGTAACCTTGAA 39052 28 100.0 32 ............................ TTGATAGATACCAGCTGGCAACCCTGTGAATT 38992 28 100.0 32 ............................ TGATAAAGTGGGTATTGTAATTTCAGTGATTT 38932 28 100.0 32 ............................ TCTAAAGAAATATCACGCTACAATGATCTGAG 38872 28 100.0 32 ............................ ACAACAGCAAAATACCGCTAACCAAGGGCAAT 38812 28 100.0 32 ............................ CATACCCTCTACTTCTGGATAATCACAGCCCT 38752 28 100.0 32 ............................ CGATTTGGAAGCCAGTGGTTTGGCTATCGTTA 38692 28 100.0 32 ............................ TGCAGGTAATATTCGACATCGAGAACGGTTGG 38632 28 100.0 32 ............................ GCAGGATGCAACTTTTCCCTCCGAAACTTGTC 38572 28 100.0 32 ............................ ACTATGACCAGCTCCGGACCGTCTGCGGCGAC 38512 28 100.0 32 ............................ ACTTGGACAAGGAGCTTACATTGTGCCTTGTG 38452 28 100.0 32 ............................ CGTCAGGCCCGGTTAAAGTGGCAAAGTCGATC 38392 28 100.0 32 ............................ GGGGTTTTTACGCCAGGCCGTTGACATGGGGA 38332 28 100.0 32 ............................ TGTATCGCACTCACTGTTGCCTTGGTGTCGAT 38272 28 96.4 32 ..........A................. TCAGCGTCCTTCGGCATTTTTTTGAGCTTTGC 38212 28 96.4 32 .................T.......... TTCATATACAATCCACCAGGATTTTTCATACC 38152 28 100.0 32 ............................ AACCACCTCGAAAGGCGCAAAGTTGACATTAA 38092 28 100.0 32 ............................ TGTGCGAGCAGCTTGTCGGTGCTGAAACAGAT 38032 28 100.0 31 ............................ TTGGCCATGTATGCCCTATCATTGGCAGGTT 37973 28 96.4 32 .........T.................. CTTAGTATTGTTTCGGCTCGCTGGTAGCCCAA 37913 28 96.4 32 ............T............... AACTGATGATTTTGCCCAGTCGATTGCTTGCC 37853 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 53 28 99.6 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCGGCAAAGTCGGGCAAGCCGCTGGCAGAGTGCTTAACCGATCTTGCAAAAAGCAAACCGACTGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCCGTTCGATTGCTACGGGTTGAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGCATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTGGTATTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACTTTCTTTTATTGCTTTATTCTATT # Right flank : GTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTTGGCCCCAGCAATATCTGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAGGTGATCTAAATAGCGGCCCGCCTCAAGGCAGCATATCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGACAGTTGGAAGCGTCCTGCTCTGGGCGGGCGCCATTCCAGGGTTTGGCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCGATGTGTTCATTCGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCCTTCAACGGGGAGCGGATAAGCGGGGCAGTGTAGCTAACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACACC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //