Array 1 82548-80200 **** Predicted by CRISPRDetect 2.4 *** >NZ_VBUF01000005.1 Aliarcobacter thereius strain 17CS1191_2 NODE_5_length_229117_cov_52.089593, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 82547 37 94.6 36 .A..T................................ GATATATTACTTTATTGGTGATATGATAAAAATTAT 82474 37 100.0 34 ..................................... TGAAAAAAATAATATTACATTTATGTGCTGATAT 82403 37 100.0 35 ..................................... CTTAAAGCTTCTTTTTCCGCATCTTCTAAGGTTAA 82331 37 100.0 36 ..................................... GAAGAGATTATCTATTTTATAAATCAAGGGTTGGAG 82258 37 100.0 35 ..................................... CATTAGTAGTAATATTATATAAAAAAGTTTCAGAG 82186 37 100.0 35 ..................................... ATAATTGTTGTTGGTTATATGTATTTGTTTAATAA 82114 37 100.0 36 ..................................... TGTATTCGCTGTAAATGAAATCCTCTTGCAATTTGT T [82088] 82040 37 100.0 34 ..................................... CTTTTAGTATCCTATCGCGAGATAAAATATAGTT CTT [82002] 81966 37 100.0 34 ..................................... TTCATATTTATTCTCCTTATTTTGCAACAATTAA 81895 37 100.0 35 ..................................... ATTACTTTAGCAGTTGGACTTCCACCCTCTTCTAC 81823 37 100.0 34 ..................................... ATAGCTCGGTTTCGAAGCCAGGCGGTGGTGCTGT 81752 37 100.0 32 ..................................... ATAAGAGCTAATCATTTAGCATTAGTTGAAGC 81680 37 100.0 35 ..................................... GAAGATACAGTCAAAAAAGACAACTCAATAAATAA 81608 37 100.0 34 ..................................... AAACAAGCTGAATTAATGAAGCAATATCACAGTA 81535 37 100.0 35 ..................................... TAACTCAGAAACAGTTACTGGCGGAGTTTATACTG 81463 37 100.0 35 ..................................... CACAAACCCCACCTATTACTAAGTGGGTAAATTTA 81392 37 100.0 35 ..................................... GAAACTGGATTGTTTATAAATCTTGCAGCAGAGTC 81320 37 100.0 36 ..................................... CTTCTTATCGTATCTAGTAACAACTTTGGAAGATAA 81247 37 100.0 35 ..................................... AAAGTTATGTGGACTTTTAACACTGGAAGACATAT 81175 37 100.0 34 ..................................... CAAAAGGCTTTGCAGATAGATTTGATTCATCTTA 81103 37 100.0 32 ..................................... CCTATATGAATTTGCTTTTAAATGTAAAGAAT 81032 37 100.0 37 ..................................... AAAAAAGAAGTAGTATCGGAGCGGTTGAGTTAGATGT 80958 37 100.0 35 ..................................... ATATCTACTTCTGGCGAGTGGTTTCTTATGCAAGA 80885 37 100.0 34 ..................................... AAAACAAGTTGAAAATAGAAAATTTGATACAAAA 80813 37 100.0 35 ..................................... GTATGTGGATAACTACATTAGCTCAAGCAATAGTA 80741 37 100.0 34 ..................................... TTTGATTTGTTTACTATTGCTTGGATTGGATATA 80670 37 100.0 38 ..................................... CGCCAAACTTGGCAAAATGTATTGGCAAATAGACAGTC 80598 37 100.0 37 ..................................... CATAATGCTCCAGATGATTTTGAGTGTATTTGGGAAA 80525 37 100.0 34 ..................................... TAGGTTTATTTGATGAAGCAAAACTTGCAAGGGA 80454 37 100.0 31 ..................................... ACCAAAGTTTAAAACAGTTAAGTGCAGGTAA 80380 37 100.0 33 ..................................... TTTAAATGGCACTACATAAGCTTGACCAAATAA 80308 37 100.0 34 ..................................... ATTAAATTCTCCTTAGTCCAGGTGTACCAAATGT 80236 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 33 37 99.8 35 GTTTCATTAGCTAAGCGATATTGTTGTAAAGTGTCGC # Left flank : TGAAGATGCATATACAAATATATACTATTTTTATTTTTTATTAAATAATAAAATAAATAGAAAATATATAAATAATAGAGTAGAAAATATCTCTTTATTTTCAAAAGAGTTTAAGAAATTTGATTTAAATAATATTTGGAAATTTATAAACTCAAAAGATAAAGAAGTATCTGAACTTTTTAGACTTATTGCTATTGGGAATATTGAAGGTGCTAGTGAGTTTATGAATTCAAAACTTATGATAAGTTATGAAAAAGAGTATTTTGATAAATTAAGGGAAGATTGTAATTGAAAATAAGCTTTACAACTATTTAGAATATTAGTTTAAAATCCAAATATAAAAAAAGGAAATGCAACTACTATTATAAAAGTAATTAACATAGTAATAGGGAACATAAGTGGATTTTCAAAATAATCCTTGATTTTATCTTCTAAAGGTAATTTTTTCATGGATATATTATATATAAAGATATATATAATATCAAAAAATTATTTAATAA # Right flank : CCATTTAGTTTTTCCGATATTTTGGGCTTTCTTAAGTATATTTTTATCTGTTTTTTTCGAAAAGTGATAAATTGTTTAAAAAGTGCTTGATTTTTCGAAAAAATTAGATATAATCTTTTTCGACGCTTTACAACAATATCGTTTGATGCTATGAAATCATTAAAAAGATATATAGACTAGCCCAACTGCGAAAGCATGGCTGGTTTTTTTATTGTTTTAAAATCTATCATTACAGTAGTTCAGAAACTCACATTGAGTACATTTTTCATCTTGAGCATCACTATAAGGTAAATTTTCACTTTTTATTAAATTTATAATTTTATTAACTATTTTTTGAACATCTTGTTTCATTTCATTGTTTACATTTATAGGAATTGTTTTTGCACTTTTGTCAAAACTGATAAAACCTAGATTAAACTCTTTTTTATATATTTTTTCAGCTAAAATTCCATAGGCGATTAGTTGCATTTTTTGTGCTTTTGTTGGTTTTTGCCCATGTA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCATTAGCTAAGCGATATTGTTGTAAAGTGTCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-91.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //