Array 1 213-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWKH01001095.1 Streptomyces sp. SID1328 SID1328.c1204, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 212 29 100.0 32 ............................. GAGGCGGCCACACGACGGGGGTCAGGCGGTGA 151 29 96.6 32 ............................C CCCGACCTCATCGCCGACATCCTCGCCGGCCA 90 29 96.6 32 ...T......................... GCGACTGCGATGCTGAACGAGGCCAAGGGCAA 29 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTCCTCCCCACGCACGTGGGGGTGATCCG # Left flank : | # Right flank : G # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCACGCACGTGGGGGTGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCACGCCCGTGGGGGTGATCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 276-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWKH01001039.1 Streptomyces sp. SID1328 SID1328.c1140, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 275 29 100.0 32 ............................. CGGCCGGTTCGGAGTGCGGTGCGGGCGTGGGC 214 29 100.0 32 ............................. CCCTCCGGGTCGTCGTCGGCAGCGGCGAAGAG 153 29 100.0 32 ............................. GCTTCACGTGCCGCTCCACCGGCACCCGCAAA 92 29 96.6 32 .....................A....... TTGTGGCTGCCCACGCCGACCGTACGCAGGCC 31 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 99.3 32 GTCTTCCCCACGAGCGTGGGGGTGGTTCG # Left flank : CCTTGCGATGATCCCGGGGCCCGGCCGAGTCCACACCGGCAATCTCTACCGGTTAACACAGTCGAATGCCGATCCTGACCTGATCACCACCAGGCTCGGCGCCAACAGCGTTTCCCTGATCCCCACGTTCCACGACCTGGACGGGGGGATCTGGCTCGACCCCGGCCACACCGTCCGCCTCCCGGTCCCCACGCCCGGTGCCCGAGGCCGGCTCACCAAGGCACAGATCCGAACCCTCATGAGCTACGCGGTACCTATGCGTGCCGGATCCTGGCTCACCCAGCTCACCACCGACCAGCAAGCTCACCCGGACTGGATGACGGAGCCCCGGCTGCGCGACCTCGTACGCCTCCCGCACTACCAAACGCCAACTGGCCACCAGCCACAACCAATCGGCCGCCGACGACTACGGCTCGACCCCATCCTCGGTATCGTCGACGACGCACGCTGAGCATTGCAAAGAAGAAGAAAAGCCACGACATCGGTGCAGTTCAGGAAGT # Right flank : GAA # Questionable array : NO Score: 3.02 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGAGCGTGGGGGTGGTTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 2 4050-3244 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWKH01001039.1 Streptomyces sp. SID1328 SID1328.c1140, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================= ================== 4049 29 100.0 32 ............................. CCCGGCCGCCCAGCCGGAACCCCGGACAGCAA 3988 29 100.0 32 ............................. CTGGAGAAGGCTGTCGGACTCCACAAGTAGGG 3927 29 100.0 32 ............................. TCGACCGGCGGCAAAAGCGAACACCTCGGGAA 3866 29 96.6 32 ....................A........ AGAGCACGGCGGTTCCTTGCATGTGGTGCCCG 3805 29 96.6 32 ..............T.............. GCAACCCCGCTCCGACTCCGCCAGAGCCAGCC 3744 29 96.6 32 ..............T.............. ATGGCGCCGCATCCGCAGCCGTCGGTGTCGTA 3683 29 96.6 37 ..............T.............. CCCGCATACTCATCAACTACGACCAGAGGGACGTCCC 3617 29 96.6 77 ..........T.................. TGCGACAACAAACTGGCCTACAACCGGCTCGCGTCCTCCCCACGCCGGGTTCGCCGCCTCAACAACGTCTCCGGCAC 3511 29 93.1 32 ...G.........G............... TACGGGCCCTACGACAAAACGGCGACCGACGG 3450 28 82.8 33 ........T...T.A-............A GGCGACTGGACAGGGCGCGGCAACCGCCGCGGC 3389 29 93.1 32 .........G...C............... CCCTGAGCAGCCAACTTCTGGAGGTCGGCGGC 3328 28 86.2 28 .......TG.....-.A............ AGCAGGGCGTCAGAACCTCGGCGATCTC 3272 29 86.2 0 .......T..T..GT.............. | ========== ====== ====== ====== ============================= ============================================================================= ================== 13 29 94.2 36 GTCCTCCCCACGCACGTGGGGGTGATCCG # Left flank : | # Right flank : ATGCTGCACAGGTGGTGTACCCGGCCGTGGGTGTGATCTTGGGTGGGCTGGTTGTCGTACCTGCTGGTTAGGCTCCCCAGGGTTACATGGCATGGGAAGGGGCGCGGGGTGTCTGGCGACGGGTTCGAGTGCCGTATCTGGGCCAAGAGCAATGGTCTGCCGGGTGGGGGGCACTATCCGCTGATCTGTCACCTGGTGGATACGGCTGTCATGGCGGGCGTTCTGTGGGATGCGTATCTGTCGCGGGCGCAGCGCTGGTTGATCGCTCGCGCTCTGGGCGTGGACGAGGACGCGGCCGGGCGGGTGGTGGCGTTCTGGGCGGGGTTGCATGACATCGGTAAGGCGGTGCCGTCGTGGCAGGCCGCGCGCGGTGACCTGATGGCGGCGTTGACGGCGGATGGTTTTCCAGGCGTGGACGCGGCGGAGGCTGCGGCGCTGGGCCGGCATGAGGCGTCGTCGCAGTTGTTGGTGCCCGAGCTGCTGCACGGGGTCGGCTGGTC # Questionable array : NO Score: 5.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:-0.25, 8:1, 9:0.37, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCACGCACGTGGGGGTGATCCG # Alternate repeat : GTCCTCCCCACGCATGTGGGGGTGATCCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCACGCCCGTGGGGGTGATCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 579-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWKH01000955.1 Streptomyces sp. SID1328 SID1328.c1050, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 578 29 100.0 32 ............................. GCAGCCCCCATGCTCTACTCCAACAACGGACA 517 29 96.6 32 .....................C....... TGGAGGCCGTCTGCGCCGATTCGGCCGGCGTA 456 29 100.0 32 ............................. GCCGCCTGGCGGTTCCTCAAGAACGGCCCGGA 395 29 93.1 32 .........G....T.............. TACCCCCTGGCCGCGCCCGGCTACAAGGTCAT 334 29 93.1 32 ..............T.............A GGTGCTCCGCGGAGGTACACGAAGGCCGCGTC 273 29 96.6 32 ..............T.............. TGGACCGAGATCATCGGCTTCGAGAGCAGCGG 212 29 96.6 32 ..............T.............. AGACCCATCTCATCGAGATGGCGGGCGCGCTG 151 29 96.6 32 ..............T.............. GTTCCCCACGCGGCGTTGTGCATGTTCCAGAT 90 29 96.6 32 ............................A CCGATGACGATCATCGCGGCCACCCGGCTCGA 29 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 96.9 32 GTCCTCCCCACGCACGTGGGGGTGATCCG # Left flank : | # Right flank : G # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCACGCACGTGGGGGTGATCCG # Alternate repeat : GTCCTCCCCACGCATGTGGGGGTGATCCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCACGCCCGTGGGGGTGATCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //