Array 1 819-671 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUAA01000128.1 Vibrio cholerae strain M1526 contig00128, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 818 28 92.9 32 A.........................G. TTAACCATCACGATCACAAAGCCAGACGAAAC 758 28 100.0 32 ............................ GTTTGACGCATCAGTCTTAGTTGTGGCACAGC 698 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 97.6 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GAAATTGGATTTGCTTACTCAAGCGCATTGGATGC # Right flank : TAGTTATAACTTTGGCATTTGGGATCGGCCAGTTAACAAACGCCTCAAAGGGACTGTCAACGCGTAGCGTTTCCAGTCCCATTGAGCCGCAGTGGTTACGGTTGTTGTGTTTAAGTTTGGTTGTAATGCGTTGCCAGCCCCTTAGGCGGGCGTTATGCTTAAATCATAAAAATCAGTAGGTTGTGGTTGTCGATTCCTTTGGCATTTCGTTCGGGTTTTTTCGGCAATTCAATATTGTTTGTCGCTGCCTAATGAAGCGGCAATGTATCTGGTGCTGAAAATTCAGTGTTATTTCCTCATTGAAATGTTGAGTCTGCGTGGGGTGAATGTTGCTGGCTCAAGTCGTTTTGAGCAGTTTGGTGCCTTTACTTACAGGCTGAAAGTTAGTCGGCAATTGAGCATTGTTTTGCGCTACCTAATGAAACAGCAATATGTTTGTTGCTTTAAGTTTCAGCGCCATGACCTCATTGAGTTATCACGCCAATGTGTGGTGAGTTGGT # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.10,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.87 Confidence: MEDIUM] # Array family : I-F [Matched known repeat from this family], // Array 1 162469-162308 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUAA01000011.1 Vibrio cholerae strain M1526 contig00011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ================================== ================== 162468 31 100.0 34 ............................... CTCTAGCTGCTTCGTTAAGTTGTGGGGCTTCTCC 162403 31 100.0 34 ............................... CAGAATAAGGCTGAAGTAAAAAAGGTAATTGTTG 162338 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ================================== ================== 3 31 100.0 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAA # Left flank : GCGTGGATTGAAACAGTTACAGCACAAGTAAAAAAAGGCGAAAGAA # Right flank : TAAGTATTGTCACATTATTGCAGGCAATTTGTTGCCCGTGAGCAAGTTTTTGCCTCGCCAATTTTCGCGTTATCATGCGCTTAAAGCAGAATAAGCGAGGATGTCAAAGCCATGACAAAAGATATTAGTCGGTACAATATGCGTTGGGTTGAAGGGGACACTTTACCTGAAGCTCCAAAGCCTAAACTTTCTCCGAAAGAAAGGTATTTAAAGCAACTCCAAGAGAATCATCGACAATCTGAAGAAACGTGGTCTTATGTCCAAGCAAACGAAGACCGTTATGCATTACAAAGAGCGGATGTCCTTACTCGCCGAAATGCCTCACAAATGCTTGATGACTCTCTTCGTGACTCACTAAGTTCGCAGTGTTCACTTGAAGAAGAAATGGCAAAGAATCATCAACATGTTCTTATTGCAGACTTAGAAGATGCCCATAAAATCTTGCACAACATTTGGTTGGAGTCTGGTCGTGATGTTGCTGCAATTGCTGCGAGTATCAA # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 10-749 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUAA01000042.1 Vibrio cholerae strain M1526 contig00042, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================================================================================================= ================== 10 28 100.0 32 ............................ GTGATGGCGCTAGAAAACAGCGTTTAACTCGC 70 28 96.4 33 .........A.................. CTCAGGCTTCGCAGAAAGCCCCAGAACGCGTTT 131 28 96.4 32 .......T.................... AATTTGTGTTGTTATTGGTTAGTGTTACGCAG 191 28 100.0 32 ............................ TGCAGAAGCAAATGGCGCATTAGAGACAGTTA 251 28 96.4 32 .......G.................... TTATGAATCACAGGCGACTGTTGGATCAAAGA 311 28 100.0 32 ............................ AACGCCTAACCGCCAGTTGGCGCGGAAGTGTA 371 28 92.9 32 .......G.........A.......... TGAGAGTGCAGATACGGTTCGCATCACCGCAT 431 28 96.4 31 .......G.................... CAAGTTAGTTATCTTCATTGTAGTGCTTTAT 490 28 89.3 32 .C.......A..........G....... AACTTAATTGTGCAGACAGCGTCTGCACAATG 550 27 82.1 145 ......T.A.........A..-.....C GCTATCTGATCGAATTTCATGCAGCTATTTTTATTTTTTATTAAAAAGACTTGTATAAATAAAAATGATCATTGTATGATATGAAAACCAAATGAACCGCACCTATCTGCGTGTCAAGGTGGCTTAAAGATTTTAAATTTAACAA 722 28 82.1 0 A.......T..TG.............A. | ========== ====== ====== ====== ============================ ================================================================================================================================================= ================== 11 28 93.8 43 GTTATCCACCTCACTGGTGGCTTAAAGA # Left flank : CTTCAGTAAG # Right flank : AAAATCAGTCCTTTTATATTTATCATAATTGGTTTGATTAGAGTTAACTGATCAAGTAATAAAAAAGAAGTAAAAATGACTAAATTTAGAGAGATAAAGGAACTGGTTTTGTCACATTATAGTGATAAGAAGAAAGATGCGCTTCAACCAGGCGAGGTCTTTAAAGCCATTGATCCTTTAAAGCGTCCAAATAGATTCTTGATAGAGATAGATGATGATAGCGAGTTAGAAGAGCTGATTGCCTTGCATATTGCTTGTAGCCACGCGCCTAAGCCCAAAAAGCCCAAAAAGCCCAAAAAGCCCAAAAACGAAAAAAATCCTACCGAATCTACAGAATATGCAGAGAATGTTGATTCTTTTGTGTCTATTGAGTCTGTTGAGTCTGTTGAGTCTGTTGAGTCTGTTGAGCCTGAAGCATTTAAATTGACGGCTGAAGACCTATTTAAAGCATCTTCAATGAATGGAGTTATTCCTGAAAAAGATGAAGCAATGGTCGCAAA # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATCCACCTCACTGGTGGCTTAAAGA # Alternate repeat : GTTATCCGCCTCACTGGTGGCTTAAAGA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.80,-7.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [10.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 152-4 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUAA01000043.1 Vibrio cholerae strain M1526 contig00043, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 151 28 100.0 32 ............................ TTTTGGCGCGCCCCTGATAACATTGCCATTAA 91 28 100.0 32 ............................ ACTCAAGCTCAAAGCCTTGCCACCCACGCTCA 31 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GATGTAACTTATGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGAACTATGGGCAGCAAAATCTGGTAAACCGCTGGTGGAATGTTTAGTGGATTTACAACAAAGCAAGCCGACAGCGTTGTGCTCCTTGCCCTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGTTCACCAGAAAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCAGCAAAGCACATCTCAAGATGGGGGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGGCAGTCAATGTTGGCTACCGTGCCGCACTTTTAAATTGAACGAAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTTAAAACAAATAGTTGCAACGGGTGATTTTTAACAAGGTAAAAAGATGATTTTTATCCTAACATTCTGTTGCAGCTTGTTTTTATCGGTTTATTCTATT # Right flank : AATC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.10,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2810-3014 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUAA01000049.1 Vibrio cholerae strain M1526 contig00049, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================== ================== 2810 26 100.0 34 .......................... GAACTGATCGCATAACGCTTCATCATTAAAAATG 2870 26 100.0 33 .......................... GAACAAAACCGAGTCATTCGACCCTGCGGCGTT 2929 26 100.0 34 .......................... GATTGTGATCGTTCTTCAAAAACTTGATCGCCTA 2989 26 96.2 0 ...........A.............. | ========== ====== ====== ====== ========================== ================================== ================== 4 26 99.0 34 GTTATCCACCTCACTGGTGGCTTAAA # Left flank : GTGACTCAAGATTAGACATTGCTATCGATTTAAATAGCTTAACTTCAATTTCGTTTATATTTTCAGGAGTTAAAAATTCACCATCTTTTAAAAACCCAGCTTTCTCCATTTGGGTTCTCGTGCTATTTTTAAAAACATGATCGCTAGAATTCATTGAGGATACAATAAACTTAGCCAATGTTGCTATATTCTTTACTGTTTTTATCGGTGTTGACATTATTTGCATTCTCTATTTTCATATTTAAATAAATTATATCACTGATATTAGCCTAATTCCTAGTGTTGCTCTCAATAGAAATTAAGTCGTCACACACTTACAGTTCTACCTTTTCATTGAATATTAAAAAATAACACTTATTTTTTCAATGTGGTGAACCTAAATCCGTCTTTTTATTGATCTGGGGTTAATTTTTTAATAGAATAAAAATCAAAATGAAGATTTTTGGTGTAAACTTAGATAAGTCTCATTAAAATAATAATGATGATGGTAAAAATCACTA # Right flank : AAATTATTTTGGCTGGCGATTCAGCGATCATGCAATAATGTTTTTCATTTCCGTGATTCTCCTCGCCCTAATCGGGCGAGGCTTTACGGAGGAGTTGCTAAAGCGGCAGGAGCGGTCAATCCAGCCACTTTTAAATGAACCTCTCAGTCCATTAGGGATGGGGGTCATTCCACATTATTTTTTAAGTTAAATACGCTAAAAATTTGTTTAGCAGTCTTGTTGCCAATCCCTTTTATCTCAAGAAGTTCGTTTTCTGTCATGTTAACGATTTCCGCTAGAGATTTTCCGCTCATAGCAAGCTCATATGCGACTTTGGTGTTTATGCCAGGCAATATAGCCAAAATTCCTTTTAAGCCATCAGAAGCGCTGATAACGCCTTTATGAGGGGATTCAGAAACTGATTGGATTAAGGCTTTATTCATCTTCTTACGCTCAGTAGAACTCATATCTACTCGCGTATTTCTGACTTTGACAGGGTAGTATAAGGATTGCTCAACAAA # Questionable array : NO Score: 2.81 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATCCACCTCACTGGTGGCTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.80,-7.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 13980-14143 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUAA01000045.1 Vibrio cholerae strain M1526 contig00045, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 13980 32 100.0 35 ................................ AGGCTCAGTTAGAGCCGGTATGGTGAAAGATATGA 14047 32 100.0 33 ................................ AATAAAGAGCGCTCACTTAAGCAAGATAACTGG 14112 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 3 32 100.0 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAT # Left flank : CCATTTGTGATCAAAAAATAAGGAGCGAGCCATGATGGTATTGGTCACCTACGATGTATCCTTTGCCAGTGAAGATGGTCAAAAACGCCTCAGACAATTAGCAAAGGTATGTTTAGATAATGGAGTAAGGGTGCAGTATTCTGTATTTGAATGCGACATAGATGCCGCGCAATGGCTGCGCTTTAAAAATAAGCTGCTGTCAATTTACGACCCTGAAGTAGACAGTTTGCGTTTTTATAAGCTCGGTAAAAACTGGCAAAACAAAGTAGAGCACCATGGTGCGAAAGAAGCCATAGATATATTCAGAGATACCCTAATATTATAGTCGCTAGGCTTGAGTTCTCAGTAAAATACTGGGGATCTAGCGATTGCATAAGCTCTTTAAAAATATAGGAAATAATTATCTGTATAGATTCACACAAAGTAGTTTTGTGCTACCGCGCAAAGTTAGCGGTAACCAATAGAGTGTGTTAGTTTGTACGTGCCTCTAAGAAGAGGCA # Right flank : TGGAAGGTGTCGATCTGTCCGATGAAGTTGAAGT # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA // Array 1 23-350 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUAA01000056.1 Vibrio cholerae strain M1526 contig00056, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 23 28 96.4 32 ...........C................ TGAGCCGCACAAGCCGAGTAAACTCGGCGCGG 83 28 100.0 32 ............................ ATTACTACTTTCTCGATGGTTCGTTGCTCAGC 143 28 92.9 32 ........T..C................ GTGGCGAGAGTAACCGGAGTTCATTACCTCAA 203 28 100.0 32 ............................ TGCTTTGGGTTCCACCCAGTCAGATGGCCGTT 263 28 100.0 32 ............................ ATTGTGTAAGGGTCGTTGTGCTTAAAGCGCTG 323 28 89.3 0 ..........A..............TT. | ========== ====== ====== ====== ============================ ================================ ================== 6 28 96.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TGTGCAATCCTTATGCACTTCTG # Right flank : AGAAAGTAAATCAAACGAGGCAGTTCACTTTATAGATTACGTTAAGGTTCTTACGTTCTGCTACGCATGTTTATTAGGGTTTTCTTAAATGGTCTTTTCACAAGCATTAGTGACAAATTTCCGAGGTGTAATGATTAAGATAGCCCAGCTGATGAGTATCAGTTGAGGGGTAGTCACCATGAGCATTGTTGGTTGTGTTAATATCAAATCCAAGCATATCGATCGAACATGTCAGATGGTCTCGTAAGTCAAATTTTACTCAGAGCGAGTTTTGCGTCAATAAAAATCCTTTAAAATCATAACGTAATGAGCTATTGGATTACATCAGCTTCCATGTCTTAAGTGGAGGTTATATTCTAGATTATTTTCAATTGCCGAGTACCAGTCACAGATAGGCTACCTTTGGCGGCCTCTTCTATATGCCCGCTCCACCAGCTCATCATTGGCTTTCTGCGTTCTAAGTAGTCAGTGCGGTTATAGGCGCTACGCACTTGGTTGTC # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //