Array 1 10963-10630 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAERUC010000107.1 Streptomyces sp. For3 382, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 10962 27 93.1 32 ...........--................ ATCGACGCGGCTGGCTATCTGTGGATCCAGGA 10903 29 96.6 32 ......................G...... CACGTCGTCACCGAGGCCTCCGGCTACCTCAC 10842 29 100.0 32 ............................. GGGGTTCGCCTCACGGGCGCCCAGTGGAACGC 10781 29 100.0 33 ............................. GACGATGGGGAAGACGACATCCTCGACTAGGGG 10719 29 96.6 32 ...........G................. GGGCCGACCGGGGGCAAGCCGGTAGAGGACGC 10658 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 6 29 97.7 32 GTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : ACCATCCGAGGATCGAAGCGTTCCGCGAGGCCTGGCAGCAGCTGCCACCGTCCACCACGCTCCCGGAGGGGGCCGGCCGATCCTCGTCCCCGTACGGCAGAGCCGCCGAGGAGGCCGGCGCCTTGGCGGAGGCGGCCGCTGAGTCGACGCGTTTCGCGGGGGCTGATCTTGCCGCTCTGCGGGAGGTAGCAAGGGCGGCGGACGACCACGCCGCCCGGCTCTCGGTGACCTTGCCGGAAACGAAGGGCGAGCCGCCCGCGCACCCAAAGACCCCTCGCCCCGCGGCTGTTGCTCCACGTCCGCGAGTTGCTGCACCGCCCCTGACGGCTGCACGAACCCGATCGTCGAGAGCGGGGGTATGACTGGTCGGCTCGGCCACTGCTCAGGGGGGCATGCGAGGGGCGGCTGAGAGGTGCATGACTGGAAGGCGCGTTTTGTCGGAGTCGGTGAAACCGGTGCGGAATGGCTATCACGGACGATGAACTCGCAGTTCAGCGAAA # Right flank : GCGCCCTCGAGACGGGTGGCCTCCGCCTCCATGTGCTCCCGCAACTGAAAAGAGTTTAAAGTAGGGTGTCCGTGTGAATTCCCCTGTGGCATACGGCGATCTGACGCAGCTTTATGCGTTGGATGGTGTGGTTCTCTATCCCGCTCTGAGTTTCGGCTCAGTTCATGCTGCTACCGCCCAGTTTCTGGCTTCCATCGGTCTGCCGAACGATAAGTTCTTCACCTCCCGTACGGGAGTGTCGGGATCAGTAAGGGACCCTTACGTGCTGGCCCCCTTGTTCGCCTTGGAGGATCGCTATTGCCCGGAGGAGTCACAGTCCTGGCATGTCCTGGGTTACCTTCCTGCGGCGCTTATCGCTATTGATCCGTCCTCTGGAACGGTCTACATATTCCAAGAGGGCGCGCGTGAGTACCAGGTTGCGCACCGGGATGTCGCTGCGCTAGTTCACTGCCTGATCGAATTCAGGAAGCTCGAAGACGCTTACAACTCACCCAATCCCG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCCCGCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 41580-40941 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAERUC010000107.1 Streptomyces sp. For3 382, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 41579 29 93.1 32 .............GT.............. GTCACTTTGCCGGGGTACGGATCACCCATGAT 41518 29 100.0 32 ............................. CCGCGCAGCAGCGAATCGAACCGGGCCTGCCT 41457 29 96.6 32 ............G................ GACGACACGGCCAACGTCGGTGCGATCCTCGC 41396 29 100.0 32 ............................. GGCGTCGTGGGGACCGCGGGGAAGTACCTCTC 41335 29 100.0 32 ............................. GCCCACGCGGCATGGCGATATCTGCGGGTCGA 41274 29 100.0 32 ............................. CGGTTCGTGAACGTGGTGAACGCGCGGGTCAG 41213 28 79.3 31 T..G........TGT......-....... GTGTGGCCTGGCCGACCTACGTGCCGGCGGC 41154 29 100.0 32 ............................. GCCTGGAACAGTTCCAGGGTGGCGGCCACGTG AC [41141] 41091 29 96.6 32 ................G............ TGGATGCCGCTTCTGGTCGGCACGCCGGCCCA 41030 29 96.6 32 ...........A................. GAGCATCACCAGCTCGACACCATCACAAAGCC 40969 29 86.2 0 .....T...A...............C.G. | ========== ====== ====== ====== ============================= ================================ ================== 11 29 95.3 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : GCCAGAGACGGATTGCCTGGGCGATGCCCTGGTTGAAGGGGATGCCGCGCTGCTTGCAGTCGTCCTTGAACTCCCCGTACAGCCCGGTGGGGAGATAGGTGGAGAACGAACTGCCGCCTGTGGTGTCCACGGGGGCGCGCTCGGCGTCATCCGCACGCCACGCCTGGACGCCTTCGGTCACGGCGTCCTTGATGTCGACGCCGAACTCGGCTGCCCTGACCTTGAGTTCTTGTCGCAAGGCGGCGGGCAGCTTGGCGACTACCTTTTCCCTGTCATCGGGGGAGTATGGGACGGTCATGCGGTTACCTTACTCACCTCGGTACGGGTTTGTGGTGCAGGCGGGGTCGGAAATTTGTGGCGTGTCGCCCCGATGCGGGAGGGATGATCAGGTGAAACCGCTTGAGGTTGCGACCGAATTGAGGGGTTGGGGAACAATGTCGGAATCGATGAAAGTGCATCAGAATCGGCTTGGCGGCCGATAGAACAGCAGGTCAGGGAGT # Right flank : ATGCCGACGGCGTCGGAGTCCTTGGATGATCAGGGCCTGCTCTGCGGGGGCATTCGAGTTGGCTTCATCCGCCAGGTGACGTGCTCAGTACGGGGTGGTGCTCAGGGGGCACGGAAGTCCTTCGTGTCCGGATACGTCACGTGGGTGCAGCCGCGTCGCTTGGTGATGTCGTCGACGTACGCGTGGAACAGCGCCGACAGCGTCTGGGGACCGAGTACGTTGTCATAGGTGTAGCTGGAGCTGAGGGTGTGCAGGGCAGGCTTGCCGTCGCAGATGGAGGAGGCCCACCACGCGCCGCTCGCGTGTCCGGCCGTTCCCGCCGTGATGACCTTGGGCTCGTTGCCAATGCCGTCGTATCCCACCGTGTGCGCCTCCGTGCCGAAGTAGGAGCTGGTGCGCAGCCACCATGGTGAGTGAGTGAGTGCACTGCGTGCGTAGTCGAGGTCGTCGTCGTGCAAGCCGTCGGCAATACGGCCCACCTGGTCGGGGCTGACCGCCAG # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 46267-46052 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAERUC010000107.1 Streptomyces sp. For3 382, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 46266 29 100.0 32 ............................. ACCTCCCGCGTCCGCTGCTCCGACTCGTCCCT 46205 29 100.0 32 ............................. ACGATGGCGAACTGGCCGAGCCCCTTCTCCTG 46144 29 100.0 32 ............................. ACGTACGCGATCGACCGGCTGGGCGTCGACGC 46083 29 82.8 0 ..........A.........C.G...AG. | G,C,T [46053,46059,46062] ========== ====== ====== ====== ============================= ================================ ================== 4 29 95.7 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : CGAAGGCCGGGGTGGCCTTGCCGATGTCGTGAACGCCTGCCAGCCACACAGCGAGCCGGCGCGCGTCGTCCGCGCCACCCGGTAGCTCGGCGGCGACCAGCTTGCGTACCGACAGCGGCAACCACTCGTCCCACAGCAACCCCGCCACCGCGGCGCTGTCCGCCATGTGCCGCCACAACGGCAGCCACCCATCGGAGTCCCGGTCATGCTTGGCCCACACACTGAGCGCGGGGCCGCGCAGCCTTGCCCGCAGGTCGGTGCGGAACCTCCCTCGACTGTCATGCCAGATGAATATCTGCCGGTCGCGGGGTTCCGCAGGTGAATGAAGAAGTTGCGGAGAATGTGTTGTTGTTGTGGTTGATGCCGCCTCAACTGCGGCGGGTCGTCGGTAGGGTTGATCGGTTGTTGCCGAGGGCCAGGGGGAAATTTACTTAATGTCGGTTTCTTTGAAAGTGCTCAAAACTGAGGTACTCCCGCGATAAACCTGCAGGTCGCGCAGT # Right flank : ACCTGACCTCGGTTGGTGAGCTCTTTCGGTTGTTGTCCACGGACAACAACCGAAAGAGCTCATCCCGACATGGTCGTGCCTGGGCACGCGACCCGGCACGCTCCAGCAAGGCGTTCCGTCGCTCAGTTGTTGTCCGCGGACAACACACTCCCACCCCTGCTCCCTCGTAGCGGCGATCGTCCCGACCTGTCGTCCAAAGAAGACCATGACCCAGGATGGAGCCGTGCTTCCCTTTGTCTACCGCGTGACCAAGTACGACCCCGCCGACCGTGACGAGCATGGTCACTACCACGGGCCCCAGGACATCGTGAGCGATCGCGGTGAGTCCGAAGCGGCCTACCTCGAGGCGGTCGCCGCATTCGCCGCGGATGCCGGAATCGACCGTCTCGCCGTACGGGAACCCGGAGTTCCGTCCTTGGCTCACCTCGGAGTTACGGCGGCAGCGGACGACTACGGGCTGGGCGCTCTCTTCTCGAACGGCCTGCACGGCTTCCATGACG # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //