Array 1 59590-54362 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDCE01000013.1 Xanthomonas bromi strain CFBP1976 Xb-CFBP1976-G1012, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 59589 31 100.0 35 ............................... ACACTCCCGGGCATCTTCTGATGTGGGTCGATAAG 59523 31 100.0 36 ............................... TTACCCTGACCCTGCTACGGGTGGGGCACCCTGGAC 59456 31 100.0 34 ............................... ATCAAAGCGCTTACGTCCCGCCTTAACAGCAATG 59391 31 100.0 35 ............................... GCCTTGACCGGGCGTGGCCTGCAGATGCTGCGTTA 59325 31 100.0 33 ............................... TCAGGTGGTGCCCTGGATGAGTTGCGGATGGTG 59261 31 100.0 35 ............................... TAATGCTCCCGACTGGCAGGCAATGACGCCTATCG 59195 31 100.0 35 ............................... TCTCTATAACTCTGCGCCTGTAGCTGGGAACAACT 59129 31 100.0 34 ............................... TGGTCAGGTGCTGACTGGCTCGGATGCAGTGATG 59064 31 100.0 35 ............................... TTCCAGTCCTCGTCCACGTGATGCACGTGCAGCCG 58998 31 100.0 36 ............................... TTTGCGGGCATTGTGATGCGTCAACTACGGCCTGGC 58931 31 100.0 35 ............................... ACGCCGTCCGAGCGCCGCTTGCTGCAGGCGTGCAT 58865 31 100.0 34 ............................... CGGGTCGCGATACAGGTCGTAGACCGTGTTCGCG 58800 31 100.0 33 ............................... ACGTTAGTGCAAGTTTGGTGTTGACAGTGACTA 58736 31 100.0 35 ............................... AACTTGAATCGCGACAACCGCAACGTCGGCGTGGT 58670 31 100.0 35 ............................... TCATCCCGCGACATGCGACCCGCGAACCCCTGCGT 58604 31 100.0 34 ............................... TGACCCGGGCGTATACAGCACGGCAGCCGACGTA 58539 31 100.0 36 ............................... CCAACCACGCCTGCTCCAATGCGGGTTGTGAAATAA 58472 31 100.0 37 ............................... CGCAGTGGGTGCACCTGTCTCGGTGCACCGGCAACGG 58404 31 100.0 35 ............................... AGGTGGCAAACAACAGCTTCAAGCCCGCTGCCGAT 58338 31 100.0 34 ............................... GCCTGCTGCACGGTGTGAACCTGCCCGGGTAGAA 58273 31 100.0 34 ............................... ATCAACGCCCGGTTGCTGCGGGGCTTGGAAGTGG 58208 31 100.0 33 ............................... TTGGTTGGTGCGTTTGATGCGGGTGCCCAGATC 58144 31 100.0 34 ............................... GGATACATCTTGGCACAGGAGGGCGGGGCCGATG 58079 31 100.0 35 ............................... CAGTTGACGTGCAGCCCGGCGAACATCCGCATATC 58013 31 100.0 34 ............................... TCCGCTAGTGTGGTCGTGGATGTCGTAGAACTTC 57948 31 100.0 36 ............................... CCAACGAGGCCCCGGGCCTTAGCCGGGTGACTTCTC 57881 31 100.0 36 ............................... CGGAACAGTGCGAGCCAGAAAGCCGTAAAGACTATC 57814 31 100.0 37 ............................... TCGTGGACGAGCTGCACCTGCTCGGTAAGCGCTCAAA 57746 31 100.0 36 ............................... TGGAGTTGCCGCAGCGGCGCCTGTACGTACGTGACC 57679 31 100.0 34 ............................... TCGGCGCGCGGTGCTTTGTTGAGTTCCATGTCAT 57614 31 100.0 36 ............................... ACCTCCCCCTTGTTCTTGCCACCTGCGAAGGTAAGC 57547 31 100.0 36 ............................... CTAGTAGCCGCACCTGTCTGTACCCTCCGTTATGCG 57480 31 100.0 34 ............................... ACTGCGCAGCACTTCCCCCAGACAAAGGCGGTAT 57415 31 100.0 34 ............................... TATCAGATGGGCCTAGGCCCTGCACACATTGCCG 57350 31 100.0 34 ............................... ATGCTGGACGGCGGGAACTTGCCGAACACGTTGA 57285 31 100.0 37 ............................... CTCGCCACGAATGCCGCAGCTGATCCGCCCGGTTCGC 57217 31 100.0 33 ............................... TGATTTGTAGGGCGATACACGGGTGGTATAACT 57153 31 100.0 36 ............................... CGCCGTGGAACCGAGACACGAACGCGCGCTTAATCG 57086 31 100.0 36 ............................... GGTAACCAAGCCCACCTTGTATGCGCTTAGCGGGTG 57019 31 100.0 34 ............................... TGGTCGTTGCTTCTGCCTTTCCCAAACTTGATGC 56954 31 100.0 36 ............................... AACACGTTTTTCCCCGCCGGCCGTGTGGCTGGGAGT 56887 31 100.0 36 ............................... GCCCCGTGCGTCCACAGCCTTAGCCGCCGAGTACCA 56820 31 100.0 34 ............................... CTCTCGTGCACGCATTACCCGGTAAGCGGCGTTA 56755 31 100.0 35 ............................... CATCACTGCCAGACCCAACAAACACGATCCCGCCG 56689 31 100.0 33 ............................... TAGCATCGCTGCTTCTAACATAGCCGCCGCGTC 56625 31 100.0 34 ............................... AGGTTGATGGTGATAGGGCCTGCACCTAGCTTGC 56560 31 100.0 34 ............................... TCCTACGACCCGGAGCTTGGCACCTTCCAACGAC 56495 31 100.0 35 ............................... AAGGACAACGTTCAGGACAGTGTGGAGACGGGTAG 56429 31 100.0 34 ............................... CATCTTCTCCAGCAGCCAGCCCGGACGCTCGGGC 56364 31 100.0 35 ............................... TCACTTACAGTAACCCTTGTGTTTAGCTTACCCGG 56298 31 100.0 36 ............................... CCTCAATCCCCATTGGAGGGAAGCGCAGGCTGACCC 56231 31 100.0 34 ............................... AGTTTCCCTCGAGCTCCAGTGCCCTAGCCTTGTG 56166 31 100.0 35 ............................... TTTAGGCTTCTGCCTAACGTGCCGGAGGATGGCAT 56100 31 100.0 34 ............................... AGGAGCTCGATACGCGCCCAATCAGTGGGGTGCA 56035 31 100.0 35 ............................... TCCACCATCGCACCGCCGCGCTCTTGCAGCAGGTT 55969 31 100.0 34 ............................... TTCCATCGGTGTTTGCCCAACTCGATGTACTCAA 55904 31 100.0 34 ............................... GCCTTGGTCTTGTCTAGTCCCGCGTTTGCTTTGT 55839 31 100.0 34 ............................... GTGCTACAGGTGGAGAGGGAAGTGTTCGGGAGAG 55774 31 100.0 34 ............................... CGGGGTATTACCTTCCATTCGTTATTTCCTTAGC 55709 31 100.0 34 ............................... TGGCTTCTTTTCTTCGTCGTGGGGGATTGCTTCA 55644 31 100.0 34 ............................... CTGGGTCGATTCGCTAGGCAACACCTATCGCATC 55579 31 100.0 34 ............................... TGGCTCTCCATACCCGCTGCCGCCGTCGCCATCG 55514 31 100.0 34 ............................... CGGTCTCGCCGTCGCCTTTGGTGTAGGCGTGAGG 55449 31 100.0 34 ............................... ATGGCCATGCGTCCGATCTTGCGACAGGCCACCT 55384 31 100.0 35 ............................... CTTACACAACTATTGCGAGCGTTCCAGAATGTGTT 55318 31 100.0 36 ............................... TTACCAATGAATCTACCGGAGCTGCGCATGGAACTG 55251 31 100.0 34 ............................... TAACCACCTGTCGATAGCCTGGCGCACCGACTGG 55186 31 100.0 35 ............................... TGCGTCTGAAGGTCGGTCTTCCCGCCCTTGCTCGC 55120 31 100.0 36 ............................... TCGCCGTGCTGGCGCACCATCTGAATCGCCGTGGTT 55053 31 100.0 36 ............................... CAGGATCGCATCGATATAACGCTGCGGGCTGAATGG 54986 31 100.0 35 ............................... TCCAACCACCCGCAACGCCCACGAACCGGTGACAG 54920 31 100.0 36 ............................... TAGCCGATTTAGCGTCTCAATTTTTGCGCGATTGAG 54853 31 100.0 33 ............................... GGATACCACCTAACAAGCCGAGCTTGATTTAGC 54789 31 100.0 35 ............................... GATCTAACGAACACCTGCTGTGGACAGCGCTCCCT 54723 31 100.0 34 ............................... AACGACACGTTCGGCATGGCACCATCCGCCGTGT 54658 31 100.0 34 ............................... CCACGCCGGCATCGCCCATCACGTCCAGGATGGT 54593 31 96.8 37 ......................A........ AACATGAACCTGCTGCTTTACGTTTTGCCCCGACGCG 54525 31 67.7 35 ....TAT.....AA...AT.C..G....T.. TCAGCCAAGCGAAGTGATGCACACGAATTTGGTAA 54459 31 83.9 35 ....T.T..G..T.................T GGCCCGCCTGGCATATGCGACGCCTGGGACTGCCC 54393 31 77.4 0 A.A..........T....TT...G......T | G [54365] ========== ====== ====== ====== =============================== ===================================== ================== 80 31 99.1 35 GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Left flank : GAAATGACACGGCTCAAGTCCCATGATGATTCTGGTCAGCTACGACGTCAGCACCAGCTCTCCCGGCGGGGAGAAACGCCTGCGCAAGGTCGCCAAAGCCTGCCGCGACCGTGGGCAGCGCGTGCAGTTCTCGGTCTTCGAGATCGAAGTCGAGCCTGCCCAATGGACTGAATTACGGCAGCAACTCTGCGACCTGATCGACCCGGCCCTAGACAGCCTGCGGTTCTATCACCTTGGCGCGAAATGGGAGGCCCGCGTGGAGCACGTTGGCGCCAAACCCAGCCTGGACCTCAAAGGCCCACTGATTTTCTGACGCGAACCCCAAGCGTCCCATAAAAACCGGGCAGGTTCGCACCTTCCTCAAGCAACTGATTTGCAAGAAAAAAATAAATACCTAGCGGATTCACAGGTCCGCATGACTACTTCTCGACCGCTTTTTCAGCAAGTCCGCGCAACGGCCCGTGTTTTAGCAACGATGGCAAGCACTTATGCTAAGGGGG # Right flank : GCATCATGAGGCATACCTTTTTCTGGCAGGCCTGCCGCCCACTGACGCGGCACAGGTTGGACCATGCTGGAGTTCTGCGTGTGGTGCGGGTCATCACGCACGGGGTTAAAAATTTGGACGCCGTCCATCAATGCTTGGATACCATTTATTTGACGATGATGGTCTGCGGCGTACCTGCTGGCTTGCCGTCGACCATGACCTGTGCAGTGTAAGTGCCGGCCCGCCAGCCGTCGGGCTTGCTGAAGCTCATGTTGGTGGTCTCTGCGCCGCTGGTGGTCAGCGTGGCGCTCTGCTCGCCGGCCACATGCCCATCCTGATAGGTGAGCTTAGCCGAGACCGGCACATTGCTCGCACTGCCCTCGGTCTTGACCGACACGATGATGGTGTCCTTCGTGCCGATGGTGGCGGACGGGGTCACCGTCTTGTCGGCGGCGGCCTTGGTACCGACGGCAACGCTGGATACGGTCACGGCAGACCCGGTCGCAGTACTCTGTCCGGTC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [24-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //