Array 1 511281-507833 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADZHF010000027.1 Shewanella algae strain 950570 950570_27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================== ================== 511280 28 100.0 32 ............................ TTGCTACTCCACTCGCCTGTTGCACCGCTAGC 511220 28 100.0 32 ............................ TCCACCCACGTTGCGCACGCTTACAAACTTGC 511160 28 100.0 32 ............................ GTTAAACTCAGTCCAGGTGTTGGTATCATCGA 511100 28 100.0 32 ............................ ATTGGGGATCATTATCATTTGCCTGTCTTTGT 511040 28 100.0 32 ............................ TGGCGGCGATTGAAAAGTTGGTTGATGCTGCT 510980 28 100.0 32 ............................ ATGGCGTCTGCGTATCGCTGAGGGCTGAATGG 510920 28 100.0 32 ............................ ACTACTAGCAGGCAAGAGAATGGCAGACTGGA 510860 28 100.0 32 ............................ ATGCCTCGTGCTATCTTTAGTGCTGTGTATGT 510800 28 100.0 32 ............................ ATCCAAGTTGTCTACCTTGGTGCTAGCTTGCT 510740 28 100.0 32 ............................ TGTTGCAAAGTCGAATGATGCAACTCCAAAGC 510680 28 100.0 32 ............................ ACGATGGATATGCTAAATGGTTTATTGATTAC 510620 28 100.0 32 ............................ AACCTCAAGAGCCAGATTGACGATATTTTCAT 510560 28 100.0 32 ............................ AGATTCGCCTCAAGGCATCCAGATTGGCCTCA 510500 28 100.0 32 ............................ AACCTCAGCATCATGAGCCAGCATGCCAATGT 510440 28 100.0 32 ............................ ACAAAAATCATTGTGCAGAATATGCAAATGCT 510380 28 100.0 32 ............................ TTGATTGATTCTTCTATAGATAGCTGGATTTC 510320 28 100.0 32 ............................ GTCACCAAACAACGCAGACTCACACATCATGA 510260 28 100.0 32 ............................ ATCCTCATATTCTTTTTGCCGAGCAGCACCAT 510200 28 100.0 32 ............................ AGTCCACGGGATACCTTCAATACGCTGAGGCT 510140 28 100.0 32 ............................ CGGCAGCCAAAACCTCTTTGCGGATAACCTCG 510080 28 100.0 32 ............................ TGACTCACCATTGATAACCGGCACAAACCCAA 510020 28 100.0 32 ............................ AATAGAGAGTTTTTGAAAAAGTCATCCCCAGT 509960 28 100.0 32 ............................ TGCTGCTGAACCTGTGGCGGCTCGCCATTAAC 509900 28 100.0 32 ............................ TGCGCGAGTATGTCCAGCCGTTAGCGCTGAGC 509840 28 100.0 32 ............................ AGCATTATCTTCTGAGTTTGACTTCTTGGACA 509780 28 100.0 32 ............................ TGTATCTCTGCCCTTTGATTTTTGGCTCGATT 509720 28 100.0 32 ............................ ATTGACAGGCGATTAACCGATCCGTAACGAGT 509660 28 100.0 32 ............................ TTTGACCACCTGCTGAGAAGTAATGGTAAGTT 509600 28 100.0 32 ............................ TACCGCGACCGCTACGGCTTGAACACGGTTCG 509540 28 100.0 32 ............................ AAGAAGCTGATTGCCCGCATGCTCATCGAAGG 509480 28 100.0 32 ............................ CACTGGAAACCACGCCGGCGACAACCTTCTCC 509420 28 100.0 32 ............................ TTGGCGCCCCACATTGTCAATGCCAGAGCAGC 509360 28 100.0 32 ............................ AATCGCGCACAGTGAACGACTTGAGCATGTAC 509300 28 100.0 32 ............................ CTGAACCGCGCCGAAAGTGCCGAAGCCAAACT 509240 28 100.0 32 ............................ GAGCCGGGGGTGTTGCAATGAACGCATCCAAT 509180 28 100.0 32 ............................ TCTGTGACTATGCCGCCTCGGTGAATCTGGAT 509120 28 100.0 32 ............................ TTGCAGATATTCCTTCCGAGCTGGCCGAGCCG 509060 28 100.0 32 ............................ TGGTACAAGCTGCCAGAGCTGCGCAACTATCC 509000 28 100.0 32 ............................ GTGCGCTGGGTGAAGTGAAATCACTTGGGGTA 508940 28 100.0 32 ............................ GGTAACGACTTGCCAAGCGGTTACTTCCATTT 508880 28 100.0 32 ............................ TCCTATTTTTAGTTGTTGGTAGCTAGGGGTTA 508820 28 100.0 32 ............................ GCCAATTTAGCCATATCGTTTTCCATTGTGTC 508760 28 100.0 32 ............................ GAGCCGGGGGTGTTGCAATGAACGCCTCCAAT 508700 28 100.0 32 ............................ ATCAGGCACTGATGCCGGCCATTGAAATGGAC 508640 28 100.0 32 ............................ TTTAAGGCTGCGCCAGCGGTTATCACCTTTTT 508580 28 100.0 32 ............................ TGTCTCGAGCTGGGGTCGGAAACAAAACCCGT 508520 28 100.0 32 ............................ AGATTGGGGCCACCTATTACTTTGCCGGTGAA 508460 28 100.0 32 ............................ CGTTGTCGGGTCTGTTACACAAACAGAACTGG 508400 28 100.0 32 ............................ CGTTGTCGGGTCTGTTACACAAACAGAACTGG 508340 28 100.0 32 ............................ AGTGTGTTCCTCTGGCGATTTTGGCAGTCGAG 508280 28 100.0 32 ............................ CGAAGGGGAAGGCCGTTTTGCCCTTGCCGTAT 508220 28 100.0 32 ............................ AGTGAAATCCTGTTGTTCGTTTACAGCAAAAA 508160 28 100.0 36 ............................ TGAACAGCCCGCATACACGTTCCCGAATGGGGGGGG 508096 25 89.3 32 ---......................... TGTGCGAGCAGCTTGTCGGTGCTGAAACAGAT 508039 28 100.0 31 ............................ TTGGCCATGTATGCCCTATCATTGGCAGGTT 507980 28 96.4 32 .........T.................. CTTAGTATTGTTTCGGCTCGCTGGTAGCCCAA 507920 28 96.4 32 ............T............... AACTGATGATTTTGCCCAGTCGATTGCTTGCC 507860 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ==================================== ================== 58 28 99.7 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCGGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACTGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCTTTTCGATTGCTACGGGCTGAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGCATCAAAGGGGGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTGGTATTCAACAGGGTGAAAATGGCTTTTTTATCCTAACCACCTGTTGTGACTTTCTTTTATTGCTTTATTCTATT # Right flank : GTTCTTCTGGTGAATTGCACTTGAGCCTTGCCGTGCTCCCTCCACAACGGGGATTTATCACTCGGCCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTAAAGAGGCCGAAACTGAGGAGATCTAAATAGCGGCCCGCCTCAAGGCAGCATATCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGATAACTGGAAGCGTCCGGCTCTGGGTGGGCGCCATTCCAGGGTTTGGCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCAGCCTTGAGGGCGATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCTTTCAAGGGAGAGCGGATAAGCGGGGCCGAGTCGCTAACCGCGACTCTTTGGCTGCAGGCGACCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //