Array 1 110416-109908 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHTM010000015.1 Klebsiella oxytoca strain Survcare060 NODE_15_length_162772_cov_36.8153, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 110415 28 100.0 32 ............................ TGAGTCGGCGACTTGAACGAGATTTTCAGATC 110355 28 100.0 32 ............................ AAAGAGAGAACGGGAGTTTGTAGTCAAAGAAA 110295 28 100.0 32 ............................ AACGGCCCGGGACGCCGCTGTGGAAGGCAATA 110235 28 100.0 32 ............................ TTCCTCGAAAATTATATGAAGTGCGGTAATGC 110175 28 100.0 32 ............................ AGTGAGTTTTTTTCCGCCACTGTTAACGAAAT 110115 28 100.0 32 ............................ GAAACGCGAGAACCATTTCCAGCAGTTCAGTA 110055 28 100.0 32 ............................ TGCAGGTTAACCAGAGTAACCCATTCGGTACA 109995 28 100.0 32 ............................ GGATGACCGCTCGCATCGGCATTTTTGAATTG 109935 28 82.1 0 ............T.C.....T.C..T.. | ========== ====== ====== ====== ============================ ================================ ================== 9 28 98.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ATCAGCAGCATGCTGGTGGCGAAAGGTCTGCCGGGCTTTATCGCTTATGGGGTTTTAGCTGGAGAAGTGGTTGCGCCATGTTTGCTGATTGTGGGGATCCTGACGCGCCCTGCGGCGCTGGTGCTGGCATTCACGATGGTTGTGGCCTGGCTGATGGTCGGGACGGGTAAAACCTTCGCGCTGGATGCGGTAGGCGCGTGGGCGATTGAGAGTCTGGTCTATTTCTTTGTTGGCGCGCTGGCGATTGCCTTCCTTGGGGCAGGGCGCTATTCCATTGGCGGAACCTCGGCCTGGCGCTAAGTGCACCAGGGTTTTCTGCCTCACCCTGGCCACATCCTGTTTGCCAGGGTCTCGCCGCTCGTTTTTCAGACCCTTTTTTTGGGAGTTATTTTAAGATATTGATTTTTTAATATTTTTTATTGTTGCCTCAAAAAAAGGGTAAAAGGGCTTTTTATTGATTATTGCATGATAAAACAATAAGGCAGGTGCGCCGGGCTAGT # Right flank : GAGCCATGCTACCCGACGGTTACCGCGTAGCATGGCCAGCAACAACATTAAGCCAGTACCAAATCTCCCTGCGGCTGGCAGGAGCAGGCCAGCACGTAGCCTTCAGCGATTTCCGCATCGGTTAACGTCATGGTGCTGCTGACGGTATATTCACCGGAAACCACTTTCGTTTTGCAGCAGCCGCAAACGCCCGCGCGGCAGGCGACGGTAACCGGCACCTTATTGCTTTCCAGCGCTTCGAGCAGCGTGGTGCCGACCGGGGCATAAAACGTTTTCGCCGGCTGCAGTTTGGTGAACTTCAGACCGCTGGTGGCCGCGACGGCGACTGGCGTAAAGAACTGCTCTTTAAAGAAGCGCGTCGCGCCCAGCGCTTTCACTTCCTGCTCGACGAGATCCATATACGGCGCCGGACCGCAGGTCATCACGGTGCGCGATGCCAGATCCGGCACGCTTTGCAGTAGTTCAGTCGTTAAACGTCCTGCCACGAAACCGTGGGTAGC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //