Array 1 3058700-3057653 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXTZ01000001.1 Pseudomonas aeruginosa strain PA-OT8 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3058699 28 100.0 32 ............................ TGGAACCGTTTCATCCGCAACGCAATCACCGC 3058639 28 100.0 32 ............................ AGTCGCTGGACGGCACCTGGCACCGGCCCTTC 3058579 28 100.0 32 ............................ TCAGTTCCGTAGGGGAACGGCAAATACCACGT 3058519 28 100.0 32 ............................ GAACGCAACCAGTTCCGGACCTCGCTCGCCGA 3058459 28 100.0 32 ............................ ATTCCAGCATCTGGGACGGCGATCGCGATTCG 3058399 28 100.0 32 ............................ GCCATCGACCGCGAAGCCGCAGACGGCATTAC 3058339 28 100.0 31 ............................ TTCCGCCCAGCCATATCCCTAGGGCTATCTC 3058280 28 100.0 32 ............................ AATCCGTCCAGGCGGAGTACGCAACCACCGTC 3058220 28 100.0 32 ............................ TGGTAGACGGGATATGGATCGGCGAAGTCCTC 3058160 28 100.0 32 ............................ GATGACGAAAGAGCCACCGCCGCCCTCCACCG 3058100 28 100.0 32 ............................ TCCCATAGACTTGCCGATCTCGGCTGCGGCGC 3058040 28 100.0 32 ............................ TTGACCAGATCGCGGCGTGGGGTGGTCGGCTT 3057980 28 100.0 32 ............................ TGCCCGCCATCAGCGAAACCGAACATGCTTGT 3057920 28 100.0 32 ............................ AGTGGGCCGTCCCACTCAGTGAAGAACGCCCC 3057860 28 100.0 32 ............................ TGGAGAAAAGCAATGCGAGTGGTGCGAGGCCA 3057800 28 96.4 32 ....................T....... AGACAATCCGGACCTGCCGCCCAGGACGATCT 3057740 28 100.0 32 ............................ TGCAGCGACTGCACCTTGGCTTGCTGCCGGTC 3057680 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 18 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CATGTGTCCGCGTAGCGCGACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCCTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCTCCAATTGCCCGAAACTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGCTTGCCCTCCGAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGTCAAGGCAGGCACAGAAAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //