Array 1 3650-2504 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKQA010000002.1 Lactobacillus iners isolate MGYG-HGUT-01383, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================================= ================== 3649 29 100.0 32 ............................. GGCACTGGCTAGGACAAAAAGTCTGACAAAAA 3588 29 96.6 32 ............................C CGATAGGTTCAGACATAGTGAAGAGAGTATGA 3527 29 96.6 32 ............................C ACGGAAACTGCCAAAGAAGTGGTGAGCTGGTG 3466 29 100.0 32 ............................. TACGGTAAAGATTGGATTAAGAAAAATGTTAA 3405 29 96.6 33 ............................C CTGATTTTTCCAAGTTAATAATTCATTATGGCA 3343 29 96.6 32 ............................C TGTGGTCTTTTGTAGATCAAGAGTTAGCTCTG 3282 29 96.6 32 ............................C TGCAACAACTGTACCAATTTAAACAGTTTTCA 3221 29 100.0 32 ............................. CTAGAAGCTTTTATGGAAAAGCACAAGGCAGG 3160 29 100.0 32 ............................. ATAGCTTGCTTGCACTGCGCCTTTAGCGAGTG 3099 29 96.6 32 ............................C GTATGACGAAAACCATGCACTGTTATTTTCTT 3038 29 100.0 32 ............................. TGCACACATTACCGCTTGAATTATGCCTTTTA 2977 29 100.0 32 ............................. CCTCCTGTCAAAAACGCCGTTACTACTGAAAC 2916 29 96.6 32 ............................C TCCTATATCTCAGAGATTGAAGATATGGAGAA 2855 29 96.6 32 ............................C TGATCTTGAAGTACATAAATTTTATTCAGTAA 2794 29 100.0 32 ............................. ATTAATTAACAACTGACAACAATTCAGTAATA 2733 29 100.0 32 ............................. AATGTCCGCCCTAATTTTTACTCTAGCGAGCT 2672 29 82.8 109 ....................T.A...TTA AAAACACTTCCAAATTTTTATTTACAAAATTTAGGCAATATATCATAATATGTTTAACTTAGGAGTAAGCATGTTATTTTTAGTTTTGGCTTGCTTTTTTCTTAATATT C [2647] 2533 29 69.0 0 ...C..T...T......T.T...A..AAA | A [2509] ========== ====== ====== ====== ============================= ============================================================================================================= ================== 18 29 95.8 37 GTATTTCCCGCACATGCGGGGGTGATCCT # Left flank : GTGCTATAAAAATTGCCAAAAATATTGAGGAATATTCATGTATTGTTAAACAGAATATTACACTACCTAATGCAATTAAGATTTTAACTGGAATAAGCGATGCAGAACTAAAAAATGGTAAAGATGAGTCTGTAGCAATTAAAGAGTTGTGCACGTTTATTGGAGATAAAGCATTAGTTGGCTATAATGTTAATTTTGATATCAGGTTCATCAATGAAGCATTAAAACGTAACGGACAATCTCAATTAACGAACAAAGTATACGATGTCATGAAATATGTAAAACGTGATAAGATGTTTTTAAAGAACTATAAGTTGGATACAGTATTAAGTGAATACGGAATAAATATTAAAGTACCACATAGAGCGATTGAAGATGTAAAAATAATACAACTTCTTATTAGCAAATTAGATGGATTAACTAATAAATTGAAAATTTAAAAGTGAATGAAAAAATGGTATCCTTAGGTTGCAGGTGGCGTCATAGAGGGATCTTTTAGT # Right flank : GTTATTTTTTATAATTAAAAGAAGAAAGGTAACATATATAATGGGAAGAGAGCTTATGGGGTTGGCTAGTTGTGATGATGATCGCAAAGCGATTATCAATTTTACTATAGTAGCTGCCAAATATTTTAACGATCAAGTTACAGTTGAAAAAATTAATGATAGTTTGAAGGAACATAGTCAAGCCCCTTTGACAGAAGAAGAGAAAAAATTTTATGGGGTAAAATAATTTTTGACAAGTACTCTCTATTTTTATCGAGTATTGCTATCATGAAAAATAAAAGCACTAATTTTAATATGTATGCGTGTTACAGAATACATATCTAAATTAGTGCTATTTTTTGTGATTTAAAATTTTTTATTTAGAATTTTTAGTTAATTTATTTTTGATAGATAATATGATGATAGGCAAAATTGAAATAGCAATGATAGCAATGATCAGCAAGGAAAAATGATGCTGTACAGCAGGAATATTACCGAATAAAAAGCCACAGATTGAAAAT # Questionable array : NO Score: 5.36 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.37, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTTCCCGCACATGCGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTTCCCGCACATGCGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.80,-9.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //