Array 1 950370-949803 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP007562.1 Streptococcus pyogenes strain NGAS327 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    950369	    36	 100.0	    30	....................................	CTGGAAAAAACGTCATGAAAGCCCCCGATG	
    950303	    36	 100.0	    30	....................................	GCACCATTATCAAGAATTTCAATTAATTGT	
    950237	    36	 100.0	    30	....................................	CAATGCGCTGGGGCTTTTGAGCAATGGCGT	
    950171	    36	 100.0	    30	....................................	TGAGGCTATACACTTGGTACAGGATAACAT	
    950105	    36	 100.0	    30	....................................	GTGTGCTTGGCTGGCGCATCGCAATATTAA	
    950039	    36	 100.0	    30	....................................	CTGATTTTGTTGCGATCCATAAAAGCACCG	
    949973	    36	 100.0	    30	....................................	GCTAGCGAAGATAGAGCTAGACAGACAAAG	
    949907	    36	 100.0	    30	....................................	CACTGCGGCAGTCGACCAAACAGAGATTTA	
    949841	    36	  91.7	     0	..............T...G.............T...	|                             	CT,T [949806,949812]
==========	======	======	======	====================================	==============================	==================
         9	    36	  99.1	    30	GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	                              	       

# Left flank :   AGAAACCCGAAGTGAAATCGATGATTGACAAATTGGTTGCTACGATTACAGAACTGATTGTCTTTGAATGCTTAGAAAATGAATTAGATTTAGAGTATGATGAAATCACAATCCTGGAATTGATTAAGTCCTTAGGAGTAAAAGTAGAAACGCAAAGTGATACTATTTTTGAAAAATGTCTAGAGATACTTCAAATTTTCAAATATCTCACTAAGAAAAAGTTGCTTATTTTTGTCAATAGCGGAGCTTTTCTAACAAAGGATGAAGTGGCTAGTTTACAAGAGTATATATCATTGACAAATTTAACAGTTCTCTTTTTAGAACCACGTGAACTATATGATTTTCCGCAGTATATTTTAGATGAAGACTATTTCTTAATAACTAAAAATATGGTATAATACTCTTAATAAATGCAGTAATACAGGGGCTTTTCAAGACTGAAGTCTAGCTGAGACAAATAGTGCGATTACGAAATTTTTTAGACAAAAATAGTCTACGAG
# Right flank :  ATTGCCGATGATAACTTGAGAAAGAGGGTTAATACCAGCAGTCGGAGACCTTCCTATTCTTTCTGTTAAAGCGTTTTCATGTTATAATAGGCAAAAGAAGAGTGGAGTGATGGAACAAACATTTTTTATGATTAAGTCAGATGGGGTTAAGCGAGGGGGTTAGTTGGAGAGGTTTTGCGGTGGATTGAACGCCTAAGACTTACGTTTAAGCGATTCGAGCTAAGACAAGCTAGTTCGAGATACTTGGCTAAGCACGACGAGGCCTTGGTGATAAACCTTTTGATCCTAAACTTAAAGCTTACATGACAAGTGGTCCTGTTTTAATTGGGACACTTCTTGGGGACTAAGTGGGTCTGATTCAAGAGACTCTGCTAGGCGTGAGGTCGCTCTTTGATCTCATCAAAGTAATCTCGGTAGCTCCGCTATTCTCTTGCAAGATAATCCGTAAGAAAAGATAGGCAAAGGCCTACCTTTTTTGTTATAATAGAAGGAAAGACTAA

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-0.20,-2.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.55   Confidence: HIGH] 

# Array family : II-A/B/C [Matched known repeat from this family],   
//